EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013471 (Gene tree)
Gene ID: 111238548
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5854 bases
Position: chrBDQW01001417.1:222037-227890
Accession: 111238548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018474	Pept_tRNA_hydro	PF01195.19	1.7e-45	1	1
ENSSDUP00000018502	Pept_tRNA_hydro	PF01195.19	6.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018809	-	2363	XM_022768117	ENSSDUP00000018474	247 (aa)	XP_022623838	UPI000BBE5FBA
ENSSDUT00000018837	-	561	-	ENSSDUP00000018502	186 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000013471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013471	ptrh1	94	53.448	ENSG00000187024	PTRH1	80	56.934	Homo_sapiens
ENSSDUG00000013471	ptrh1	99	81.633	ENSAPOG00000010719	ptrh1	86	78.367	Acanthochromis_polyacanthus
ENSSDUG00000013471	ptrh1	99	81.633	ENSAPOG00000003014	-	86	78.367	Acanthochromis_polyacanthus
ENSSDUG00000013471	ptrh1	99	81.633	ENSAPOG00000000947	PTRH1	86	78.367	Acanthochromis_polyacanthus
ENSSDUG00000013471	ptrh1	94	51.429	ENSAMEG00000016791	PTRH1	80	54.118	Ailuropoda_melanoleuca
ENSSDUG00000013471	ptrh1	87	85.185	ENSACIG00000006734	ptrh1	91	78.774	Amphilophus_citrinellus
ENSSDUG00000013471	ptrh1	93	83.478	ENSAOCG00000009725	ptrh1	86	77.959	Amphiprion_ocellaris
ENSSDUG00000013471	ptrh1	93	83.478	ENSAPEG00000020993	ptrh1	86	77.959	Amphiprion_percula
ENSSDUG00000013471	ptrh1	100	82.869	ENSATEG00000010003	ptrh1	90	79.200	Anabas_testudineus
ENSSDUG00000013471	ptrh1	94	55.747	ENSANAG00000025547	PTRH1	79	59.412	Aotus_nancymaae
ENSSDUG00000013471	ptrh1	100	83.600	ENSACLG00000025462	ptrh1	96	78.601	Astatotilapia_calliptera
ENSSDUG00000013471	ptrh1	87	73.457	ENSAMXG00000034117	ptrh1	90	60.494	Astyanax_mexicanus
ENSSDUG00000013471	ptrh1	67	56.000	ENSBTAG00000012736	PTRH1	55	50.602	Bos_taurus
ENSSDUG00000013471	ptrh1	96	54.749	ENSCJAG00000019841	PTRH1	73	50.000	Callithrix_jacchus
ENSSDUG00000013471	ptrh1	92	54.651	ENSCAFG00000020123	PTRH1	80	56.725	Canis_familiaris
ENSSDUG00000013471	ptrh1	92	54.971	ENSCAFG00020015776	PTRH1	77	57.059	Canis_lupus_dingo
ENSSDUG00000013471	ptrh1	94	56.897	ENSCHIG00000008188	PTRH1	79	59.524	Capra_hircus
ENSSDUG00000013471	ptrh1	55	58.252	ENSTSYG00000026891	-	93	58.252	Carlito_syrichta
ENSSDUG00000013471	ptrh1	71	57.576	ENSCAPG00000015926	PTRH1	93	57.576	Cavia_aperea
ENSSDUG00000013471	ptrh1	94	53.714	ENSCPOG00000023968	PTRH1	77	57.927	Cavia_porcellus
ENSSDUG00000013471	ptrh1	94	54.598	ENSCCAG00000023134	PTRH1	79	57.647	Cebus_capucinus
ENSSDUG00000013471	ptrh1	94	54.023	ENSCATG00000042852	PTRH1	79	57.059	Cercocebus_atys
ENSSDUG00000013471	ptrh1	94	56.000	ENSCLAG00000011155	PTRH1	79	59.412	Chinchilla_lanigera
ENSSDUG00000013471	ptrh1	94	54.023	ENSCSAG00000013748	PTRH1	80	52.062	Chlorocebus_sabaeus
ENSSDUG00000013471	ptrh1	87	59.006	ENSCPBG00000025207	PTRH1	90	59.006	Chrysemys_picta_bellii
ENSSDUG00000013471	ptrh1	94	54.023	ENSCANG00000039856	PTRH1	79	57.059	Colobus_angolensis_palliatus
ENSSDUG00000013471	ptrh1	92	55.556	ENSCGRG00001013108	Ptrh1	86	56.000	Cricetulus_griseus_chok1gshd
ENSSDUG00000013471	ptrh1	92	55.556	ENSCGRG00000016553	Ptrh1	92	55.556	Cricetulus_griseus_crigri
ENSSDUG00000013471	ptrh1	100	72.727	ENSCSEG00000010332	ptrh1	73	81.500	Cynoglossus_semilaevis
ENSSDUG00000013471	ptrh1	99	81.781	ENSCVAG00000010701	ptrh1	90	77.328	Cyprinodon_variegatus
ENSSDUG00000013471	ptrh1	54	89.109	ENSCVAG00000003873	-	80	89.908	Cyprinodon_variegatus
ENSSDUG00000013471	ptrh1	100	59.514	ENSDARG00000098206	ptrh1	91	63.256	Danio_rerio
ENSSDUG00000013471	ptrh1	92	56.140	ENSDNOG00000024194	PTRH1	77	60.366	Dasypus_novemcinctus
ENSSDUG00000013471	ptrh1	94	55.429	ENSDORG00000013321	Ptrh1	77	59.394	Dipodomys_ordii
ENSSDUG00000013471	ptrh1	94	54.598	ENSEASG00005020466	PTRH1	79	57.647	Equus_asinus_asinus
ENSSDUG00000013471	ptrh1	94	54.598	ENSECAG00000007615	PTRH1	63	57.059	Equus_caballus
ENSSDUG00000013471	ptrh1	99	70.082	ENSELUG00000015467	ptrh1	90	69.547	Esox_lucius
ENSSDUG00000013471	ptrh1	92	53.216	ENSFCAG00000001483	PTRH1	77	57.317	Felis_catus
ENSSDUG00000013471	ptrh1	91	51.765	ENSFALG00000001352	PTRH1	80	51.765	Ficedula_albicollis
ENSSDUG00000013471	ptrh1	94	55.429	ENSFDAG00000020077	PTRH1	84	57.895	Fukomys_damarensis
ENSSDUG00000013471	ptrh1	94	82.286	ENSFHEG00000010590	ptrh1	89	81.277	Fundulus_heteroclitus
ENSSDUG00000013471	ptrh1	53	70.408	ENSGMOG00000009801	PTRH1	100	64.085	Gadus_morhua
ENSSDUG00000013471	ptrh1	96	78.059	ENSGAFG00000016215	ptrh1	89	74.262	Gambusia_affinis
ENSSDUG00000013471	ptrh1	84	84.615	ENSGACG00000014682	ptrh1	93	82.000	Gasterosteus_aculeatus
ENSSDUG00000013471	ptrh1	91	60.355	ENSGAGG00000022860	PTRH1	87	55.276	Gopherus_agassizii
ENSSDUG00000013471	ptrh1	94	52.874	ENSGGOG00000011033	PTRH1	79	55.882	Gorilla_gorilla
ENSSDUG00000013471	ptrh1	100	82.400	ENSHBUG00000020824	ptrh1	90	82.400	Haplochromis_burtoni
ENSSDUG00000013471	ptrh1	94	54.286	ENSHGLG00000019147	PTRH1	85	56.647	Heterocephalus_glaber_female
ENSSDUG00000013471	ptrh1	94	50.857	ENSHGLG00100003681	PTRH1	87	53.179	Heterocephalus_glaber_male
ENSSDUG00000013471	ptrh1	87	71.605	ENSHCOG00000014772	ptrh1	87	59.184	Hippocampus_comes
ENSSDUG00000013471	ptrh1	96	62.762	ENSIPUG00000015364	ptrh1	93	61.925	Ictalurus_punctatus
ENSSDUG00000013471	ptrh1	94	53.143	ENSSTOG00000008942	PTRH1	79	57.647	Ictidomys_tridecemlineatus
ENSSDUG00000013471	ptrh1	92	57.310	ENSJJAG00000014338	Ptrh1	84	58.046	Jaculus_jaculus
ENSSDUG00000013471	ptrh1	100	81.452	ENSKMAG00000003253	ptrh1	89	77.419	Kryptolebias_marmoratus
ENSSDUG00000013471	ptrh1	63	88.136	ENSLBEG00000028842	ptrh1	81	83.212	Labrus_bergylta
ENSSDUG00000013471	ptrh1	94	57.627	ENSLACG00000016741	PTRH1	71	59.884	Latimeria_chalumnae
ENSSDUG00000013471	ptrh1	92	51.163	ENSLAFG00000021934	PTRH1	84	53.216	Loxodonta_africana
ENSSDUG00000013471	ptrh1	94	54.023	ENSMFAG00000001700	PTRH1	79	57.059	Macaca_fascicularis
ENSSDUG00000013471	ptrh1	94	54.023	ENSMMUG00000016424	PTRH1	79	57.059	Macaca_mulatta
ENSSDUG00000013471	ptrh1	94	54.023	ENSMNEG00000033061	PTRH1	80	52.062	Macaca_nemestrina
ENSSDUG00000013471	ptrh1	57	54.717	ENSMLEG00000042412	-	95	54.717	Mandrillus_leucophaeus
ENSSDUG00000013471	ptrh1	100	83.806	ENSMAMG00000017386	ptrh1	90	79.352	Mastacembelus_armatus
ENSSDUG00000013471	ptrh1	100	80.000	ENSMZEG00005020001	ptrh1	99	80.000	Maylandia_zebra
ENSSDUG00000013471	ptrh1	92	54.971	ENSMAUG00000006266	Ptrh1	86	54.857	Mesocricetus_auratus
ENSSDUG00000013471	ptrh1	94	55.172	ENSMICG00000005611	PTRH1	79	58.235	Microcebus_murinus
ENSSDUG00000013471	ptrh1	92	56.140	ENSMOCG00000013992	Ptrh1	86	56.000	Microtus_ochrogaster
ENSSDUG00000013471	ptrh1	98	82.186	ENSMMOG00000014747	ptrh1	87	80.488	Mola_mola
ENSSDUG00000013471	ptrh1	94	55.747	ENSMODG00000005503	PTRH1	80	54.598	Monodelphis_domestica
ENSSDUG00000013471	ptrh1	67	84.000	ENSMALG00000005392	ptrh1	96	75.000	Monopterus_albus
ENSSDUG00000013471	ptrh1	92	54.386	MGP_CAROLIEiJ_G0023450	Ptrh1	86	54.286	Mus_caroli
ENSSDUG00000013471	ptrh1	92	54.386	ENSMUSG00000053746	Ptrh1	86	54.286	Mus_musculus
ENSSDUG00000013471	ptrh1	92	54.386	MGP_PahariEiJ_G0024907	Ptrh1	86	54.286	Mus_pahari
ENSSDUG00000013471	ptrh1	92	54.971	MGP_SPRETEiJ_G0024367	Ptrh1	86	54.857	Mus_spretus
ENSSDUG00000013471	ptrh1	94	51.412	ENSMPUG00000013790	PTRH1	80	54.070	Mustela_putorius_furo
ENSSDUG00000013471	ptrh1	92	51.648	ENSMLUG00000013454	PTRH1	86	51.309	Myotis_lucifugus
ENSSDUG00000013471	ptrh1	94	54.598	ENSNGAG00000014008	Ptrh1	84	57.558	Nannospalax_galili
ENSSDUG00000013471	ptrh1	100	83.200	ENSNBRG00000015590	ptrh1	90	83.200	Neolamprologus_brichardi
ENSSDUG00000013471	ptrh1	94	53.448	ENSNLEG00000017468	PTRH1	79	56.471	Nomascus_leucogenys
ENSSDUG00000013471	ptrh1	94	56.571	ENSODEG00000004012	PTRH1	81	60.588	Octodon_degus
ENSSDUG00000013471	ptrh1	100	80.000	ENSONIG00000013912	ptrh1	96	80.000	Oreochromis_niloticus
ENSSDUG00000013471	ptrh1	80	61.486	ENSOANG00000011891	PTRH1	76	60.819	Ornithorhynchus_anatinus
ENSSDUG00000013471	ptrh1	94	54.023	ENSOCUG00000006894	PTRH1	74	56.471	Oryctolagus_cuniculus
ENSSDUG00000013471	ptrh1	92	56.395	ENSOGAG00000008094	PTRH1	81	58.235	Otolemur_garnettii
ENSSDUG00000013471	ptrh1	94	52.432	ENSOARG00000011808	PTRH1	79	54.749	Ovis_aries
ENSSDUG00000013471	ptrh1	94	53.448	ENSPPAG00000041782	PTRH1	79	56.471	Pan_paniscus
ENSSDUG00000013471	ptrh1	92	53.216	ENSPPRG00000007889	PTRH1	77	57.317	Panthera_pardus
ENSSDUG00000013471	ptrh1	63	54.701	ENSPTIG00000021082	-	89	54.701	Panthera_tigris_altaica
ENSSDUG00000013471	ptrh1	94	53.448	ENSPTRG00000021394	PTRH1	79	56.471	Pan_troglodytes
ENSSDUG00000013471	ptrh1	94	45.198	ENSPANG00000031755	PTRH1	85	44.162	Papio_anubis
ENSSDUG00000013471	ptrh1	98	66.120	ENSPKIG00000005449	ptrh1	66	65.500	Paramormyrops_kingsleyae
ENSSDUG00000013471	ptrh1	94	55.172	ENSPSIG00000013828	PTRH1	70	54.592	Pelodiscus_sinensis
ENSSDUG00000013471	ptrh1	84	71.519	ENSPMGG00000002148	ptrh1	70	70.051	Periophthalmus_magnuspinnatus
ENSSDUG00000013471	ptrh1	80	57.718	ENSPEMG00000014360	Ptrh1	85	56.322	Peromyscus_maniculatus_bairdii
ENSSDUG00000013471	ptrh1	96	79.832	ENSPFOG00000003715	ptrh1	89	76.050	Poecilia_formosa
ENSSDUG00000013471	ptrh1	96	77.095	ENSPLAG00000023354	ptrh1	89	71.308	Poecilia_latipinna
ENSSDUG00000013471	ptrh1	96	79.832	ENSPMEG00000000447	ptrh1	89	76.050	Poecilia_mexicana
ENSSDUG00000013471	ptrh1	96	77.731	ENSPREG00000012612	ptrh1	89	73.950	Poecilia_reticulata
ENSSDUG00000013471	ptrh1	94	50.575	ENSPPYG00000019628	PTRH1	73	53.529	Pongo_abelii
ENSSDUG00000013471	ptrh1	92	54.971	ENSPCAG00000007016	PTRH1	79	57.059	Procavia_capensis
ENSSDUG00000013471	ptrh1	94	55.172	ENSPCOG00000014541	PTRH1	79	58.235	Propithecus_coquereli
ENSSDUG00000013471	ptrh1	92	56.725	ENSPVAG00000000954	PTRH1	79	58.235	Pteropus_vampyrus
ENSSDUG00000013471	ptrh1	100	82.400	ENSPNYG00000007789	ptrh1	90	82.400	Pundamilia_nyererei
ENSSDUG00000013471	ptrh1	100	62.753	ENSPNAG00000029930	ptrh1	90	61.134	Pygocentrus_nattereri
ENSSDUG00000013471	ptrh1	92	54.971	ENSRNOG00000049034	Ptrh1	86	55.429	Rattus_norvegicus
ENSSDUG00000013471	ptrh1	94	54.023	ENSRBIG00000027290	PTRH1	86	52.308	Rhinopithecus_bieti
ENSSDUG00000013471	ptrh1	94	54.023	ENSRROG00000028799	PTRH1	80	52.308	Rhinopithecus_roxellana
ENSSDUG00000013471	ptrh1	82	34.375	YHR189W	PTH1	91	34.091	Saccharomyces_cerevisiae
ENSSDUG00000013471	ptrh1	94	54.598	ENSSBOG00000026699	PTRH1	75	57.647	Saimiri_boliviensis_boliviensis
ENSSDUG00000013471	ptrh1	92	54.802	ENSSHAG00000018238	PTRH1	85	54.802	Sarcophilus_harrisii
ENSSDUG00000013471	ptrh1	90	66.667	ENSSFOG00015007053	ptrh1	81	68.902	Scleropages_formosus
ENSSDUG00000013471	ptrh1	87	84.049	ENSSMAG00000016747	ptrh1	86	73.892	Scophthalmus_maximus
ENSSDUG00000013471	ptrh1	85	97.170	ENSSLDG00000024662	ptrh1	93	97.170	Seriola_lalandi_dorsalis
ENSSDUG00000013471	ptrh1	91	55.621	ENSSPUG00000000040	PTRH1	81	53.723	Sphenodon_punctatus
ENSSDUG00000013471	ptrh1	93	82.969	ENSSPAG00000003298	ptrh1	100	76.518	Stegastes_partitus
ENSSDUG00000013471	ptrh1	92	56.725	ENSSSCG00000005615	PTRH1	79	58.824	Sus_scrofa
ENSSDUG00000013471	ptrh1	66	56.098	ENSTGUG00000003648	PTRH1	100	55.970	Taeniopygia_guttata
ENSSDUG00000013471	ptrh1	97	80.110	ENSTRUG00000019801	PTRH1	90	77.959	Takifugu_rubripes
ENSSDUG00000013471	ptrh1	100	75.806	ENSTNIG00000016735	ptrh1	98	74.545	Tetraodon_nigroviridis
ENSSDUG00000013471	ptrh1	92	50.292	ENSTTRG00000016458	PTRH1	80	52.353	Tursiops_truncatus
ENSSDUG00000013471	ptrh1	92	54.971	ENSUAMG00000023948	-	77	57.059	Ursus_americanus
ENSSDUG00000013471	ptrh1	94	40.805	ENSVPAG00000001805	PTRH1	94	40.805	Vicugna_pacos
ENSSDUG00000013471	ptrh1	92	54.971	ENSVVUG00000013198	PTRH1	77	57.059	Vulpes_vulpes
ENSSDUG00000013471	ptrh1	94	52.571	ENSXETG00000009980	ptrh1	92	52.571	Xenopus_tropicalis
ENSSDUG00000013471	ptrh1	96	74.860	ENSXCOG00000011498	ptrh1	88	72.464	Xiphophorus_couchianus
ENSSDUG00000013471	ptrh1	96	78.481	ENSXMAG00000009256	ptrh1	89	74.684	Xiphophorus_maculatus