EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013530 (Gene tree)
Gene ID: 111218034
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 31314 bases
Position: chrBDQW01000052.1:20004043-20035356
Accession: 111218034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018578	TUDOR	PF00567.24	2.6e-69	1	4
ENSSDUP00000018578	TUDOR	PF00567.24	2.6e-69	2	4
ENSSDUP00000018578	TUDOR	PF00567.24	2.6e-69	3	4
ENSSDUP00000018578	TUDOR	PF00567.24	2.6e-69	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018914	-	4179	XM_022740123	ENSSDUP00000018578	1392 (aa)	XP_022595844	-

Gene Model

Click here to download ENSSDUG00000013530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013530	rnf17	96	31.608	ENSG00000132972	RNF17	99	35.154	Homo_sapiens
ENSSDUG00000013530	rnf17	100	68.917	ENSAPOG00000017034	rnf17	96	69.036	Acanthochromis_polyacanthus
ENSSDUG00000013530	rnf17	97	31.198	ENSAMEG00000017340	RNF17	85	30.990	Ailuropoda_melanoleuca
ENSSDUG00000013530	rnf17	100	70.309	ENSAOCG00000018283	rnf17	90	70.447	Amphiprion_ocellaris
ENSSDUG00000013530	rnf17	84	72.549	ENSAPEG00000022338	rnf17	84	73.267	Amphiprion_percula
ENSSDUG00000013530	rnf17	100	74.521	ENSATEG00000002067	rnf17	99	74.237	Anabas_testudineus
ENSSDUG00000013530	rnf17	92	30.596	ENSAPLG00000003969	RNF17	80	31.864	Anas_platyrhynchos
ENSSDUG00000013530	rnf17	77	34.748	ENSACAG00000001418	RNF17	71	34.436	Anolis_carolinensis
ENSSDUG00000013530	rnf17	77	30.641	ENSANAG00000029969	RNF17	71	30.729	Aotus_nancymaae
ENSSDUG00000013530	rnf17	100	68.104	ENSACLG00000018279	rnf17	90	68.104	Astatotilapia_calliptera
ENSSDUG00000013530	rnf17	90	48.440	ENSAMXG00000011002	rnf17	92	46.978	Astyanax_mexicanus
ENSSDUG00000013530	rnf17	77	34.672	ENSCJAG00000018937	RNF17	83	34.501	Callithrix_jacchus
ENSSDUG00000013530	rnf17	97	31.411	ENSCAFG00000007418	RNF17	77	33.883	Canis_familiaris
ENSSDUG00000013530	rnf17	50	36.745	ENSCAFG00020002919	-	86	33.105	Canis_lupus_dingo
ENSSDUG00000013530	rnf17	78	33.825	ENSCHIG00000026716	RNF17	83	33.962	Capra_hircus
ENSSDUG00000013530	rnf17	97	31.793	ENSTSYG00000000365	RNF17	83	34.315	Carlito_syrichta
ENSSDUG00000013530	rnf17	77	34.900	ENSCCAG00000026725	RNF17	83	34.142	Cebus_capucinus
ENSSDUG00000013530	rnf17	96	31.498	ENSCATG00000040352	RNF17	83	34.142	Cercocebus_atys
ENSSDUG00000013530	rnf17	97	31.336	ENSCLAG00000004127	RNF17	88	31.464	Chinchilla_lanigera
ENSSDUG00000013530	rnf17	96	31.678	ENSCSAG00000018019	RNF17	69	34.934	Chlorocebus_sabaeus
ENSSDUG00000013530	rnf17	53	42.963	ENSCHOG00000013310	RNF17	51	42.963	Choloepus_hoffmanni
ENSSDUG00000013530	rnf17	97	31.781	ENSCPBG00000020920	RNF17	91	31.828	Chrysemys_picta_bellii
ENSSDUG00000013530	rnf17	96	31.476	ENSCANG00000032927	RNF17	83	34.489	Colobus_angolensis_palliatus
ENSSDUG00000013530	rnf17	77	34.642	ENSCGRG00001022658	Rnf17	86	31.110	Cricetulus_griseus_chok1gshd
ENSSDUG00000013530	rnf17	77	34.642	ENSCGRG00000009924	Rnf17	86	31.110	Cricetulus_griseus_crigri
ENSSDUG00000013530	rnf17	97	60.677	ENSCSEG00000008626	rnf17	97	60.029	Cynoglossus_semilaevis
ENSSDUG00000013530	rnf17	85	65.988	ENSCVAG00000017008	rnf17	95	65.988	Cyprinodon_variegatus
ENSSDUG00000013530	rnf17	99	43.969	ENSDARG00000056387	rnf17	83	46.847	Danio_rerio
ENSSDUG00000013530	rnf17	77	33.596	ENSDNOG00000006115	RNF17	70	33.028	Dasypus_novemcinctus
ENSSDUG00000013530	rnf17	97	31.164	ENSECAG00000017152	RNF17	69	33.500	Equus_caballus
ENSSDUG00000013530	rnf17	67	33.473	ENSEEUG00000000332	RNF17	66	30.976	Erinaceus_europaeus
ENSSDUG00000013530	rnf17	97	31.276	ENSFCAG00000004914	RNF17	83	33.045	Felis_catus
ENSSDUG00000013530	rnf17	77	33.749	ENSFALG00000008766	RNF17	72	33.749	Ficedula_albicollis
ENSSDUG00000013530	rnf17	96	30.450	ENSFDAG00000017857	RNF17	70	33.083	Fukomys_damarensis
ENSSDUG00000013530	rnf17	100	60.825	ENSFHEG00000014822	rnf17	90	60.771	Fundulus_heteroclitus
ENSSDUG00000013530	rnf17	83	79.310	ENSGAFG00000004463	rnf17	89	79.310	Gambusia_affinis
ENSSDUG00000013530	rnf17	94	31.546	ENSGAGG00000016999	RNF17	90	31.263	Gopherus_agassizii
ENSSDUG00000013530	rnf17	97	31.891	ENSGGOG00000014491	RNF17	83	34.315	Gorilla_gorilla
ENSSDUG00000013530	rnf17	100	68.104	ENSHBUG00000003554	rnf17	90	68.104	Haplochromis_burtoni
ENSSDUG00000013530	rnf17	77	34.561	ENSHGLG00000007270	RNF17	70	33.806	Heterocephalus_glaber_female
ENSSDUG00000013530	rnf17	77	34.474	ENSHGLG00100017393	RNF17	85	31.075	Heterocephalus_glaber_male
ENSSDUG00000013530	rnf17	91	50.919	ENSHCOG00000017676	rnf17	91	50.916	Hippocampus_comes
ENSSDUG00000013530	rnf17	90	49.816	ENSIPUG00000001087	rnf17	93	44.832	Ictalurus_punctatus
ENSSDUG00000013530	rnf17	77	34.386	ENSJJAG00000016584	Rnf17	72	33.918	Jaculus_jaculus
ENSSDUG00000013530	rnf17	100	66.849	ENSKMAG00000013403	rnf17	90	67.031	Kryptolebias_marmoratus
ENSSDUG00000013530	rnf17	100	68.421	ENSLBEG00000014910	rnf17	96	68.421	Labrus_bergylta
ENSSDUG00000013530	rnf17	77	33.651	ENSLACG00000000323	RNF17	81	36.831	Latimeria_chalumnae
ENSSDUG00000013530	rnf17	99	37.604	ENSLOCG00000010768	rnf17	89	36.853	Lepisosteus_oculatus
ENSSDUG00000013530	rnf17	96	31.498	ENSMFAG00000032388	RNF17	83	34.142	Macaca_fascicularis
ENSSDUG00000013530	rnf17	96	31.498	ENSMMUG00000014610	RNF17	83	34.142	Macaca_mulatta
ENSSDUG00000013530	rnf17	96	31.498	ENSMNEG00000011234	RNF17	83	34.142	Macaca_nemestrina
ENSSDUG00000013530	rnf17	96	31.403	ENSMLEG00000030227	RNF17	75	32.751	Mandrillus_leucophaeus
ENSSDUG00000013530	rnf17	90	64.717	ENSMAMG00000020403	rnf17	91	64.717	Mastacembelus_armatus
ENSSDUG00000013530	rnf17	100	68.104	ENSMZEG00005019166	rnf17	90	68.104	Maylandia_zebra
ENSSDUG00000013530	rnf17	77	31.267	ENSMGAG00000015138	RNF17	88	31.117	Meleagris_gallopavo
ENSSDUG00000013530	rnf17	77	33.970	ENSMAUG00000004788	Rnf17	86	30.863	Mesocricetus_auratus
ENSSDUG00000013530	rnf17	97	31.080	ENSMICG00000010364	RNF17	85	31.395	Microcebus_murinus
ENSSDUG00000013530	rnf17	61	34.091	ENSMOCG00000011818	-	92	34.343	Microtus_ochrogaster
ENSSDUG00000013530	rnf17	80	84.091	ENSMMOG00000019514	rnf17	87	84.091	Mola_mola
ENSSDUG00000013530	rnf17	97	32.278	ENSMODG00000007827	RNF17	69	35.126	Monodelphis_domestica
ENSSDUG00000013530	rnf17	99	66.123	ENSMALG00000016943	rnf17	98	66.216	Monopterus_albus
ENSSDUG00000013530	rnf17	97	31.503	MGP_CAROLIEiJ_G0019337	Rnf17	86	31.458	Mus_caroli
ENSSDUG00000013530	rnf17	78	34.635	ENSMUSG00000000365	Rnf17	86	31.593	Mus_musculus
ENSSDUG00000013530	rnf17	77	34.760	MGP_PahariEiJ_G0030355	Rnf17	70	33.860	Mus_pahari
ENSSDUG00000013530	rnf17	77	35.227	MGP_SPRETEiJ_G0020228	Rnf17	86	31.864	Mus_spretus
ENSSDUG00000013530	rnf17	77	34.291	ENSMPUG00000013305	RNF17	70	33.695	Mustela_putorius_furo
ENSSDUG00000013530	rnf17	97	31.601	ENSMLUG00000003903	RNF17	85	31.434	Myotis_lucifugus
ENSSDUG00000013530	rnf17	77	34.710	ENSNGAG00000013553	Rnf17	70	34.085	Nannospalax_galili
ENSSDUG00000013530	rnf17	82	68.750	ENSNBRG00000012006	rnf17	84	68.750	Neolamprologus_brichardi
ENSSDUG00000013530	rnf17	96	31.465	ENSNLEG00000013780	RNF17	83	33.449	Nomascus_leucogenys
ENSSDUG00000013530	rnf17	100	67.556	ENSONIG00000015746	rnf17	98	65.509	Oreochromis_niloticus
ENSSDUG00000013530	rnf17	97	30.992	ENSOCUG00000007384	RNF17	68	34.323	Oryctolagus_cuniculus
ENSSDUG00000013530	rnf17	92	55.936	ENSORLG00000012818	rnf17	93	56.155	Oryzias_latipes
ENSSDUG00000013530	rnf17	100	55.695	ENSORLG00020009879	-	90	55.835	Oryzias_latipes_hni
ENSSDUG00000013530	rnf17	100	55.416	ENSORLG00015013027	-	90	55.556	Oryzias_latipes_hsok
ENSSDUG00000013530	rnf17	84	64.167	ENSOMEG00000009891	rnf17	96	58.271	Oryzias_melastigma
ENSSDUG00000013530	rnf17	77	33.831	ENSOGAG00000014803	RNF17	69	33.445	Otolemur_garnettii
ENSSDUG00000013530	rnf17	97	30.595	ENSOARG00000014641	RNF17	71	33.776	Ovis_aries
ENSSDUG00000013530	rnf17	81	34.213	ENSPPAG00000028779	RNF17	87	34.495	Pan_paniscus
ENSSDUG00000013530	rnf17	97	31.272	ENSPPRG00000009230	RNF17	83	33.218	Panthera_pardus
ENSSDUG00000013530	rnf17	97	31.202	ENSPTIG00000001738	RNF17	83	33.045	Panthera_tigris_altaica
ENSSDUG00000013530	rnf17	96	31.885	ENSPTRG00000005713	RNF17	83	34.495	Pan_troglodytes
ENSSDUG00000013530	rnf17	96	31.498	ENSPANG00000007640	RNF17	83	34.142	Papio_anubis
ENSSDUG00000013530	rnf17	81	44.780	ENSPKIG00000001648	rnf17	86	44.607	Paramormyrops_kingsleyae
ENSSDUG00000013530	rnf17	77	34.407	ENSPSIG00000011245	RNF17	99	34.407	Pelodiscus_sinensis
ENSSDUG00000013530	rnf17	77	35.145	ENSPEMG00000008693	Rnf17	70	34.391	Peromyscus_maniculatus_bairdii
ENSSDUG00000013530	rnf17	64	35.075	ENSPCIG00000009190	-	94	35.026	Phascolarctos_cinereus
ENSSDUG00000013530	rnf17	100	63.254	ENSPFOG00000007124	rnf17	90	62.838	Poecilia_formosa
ENSSDUG00000013530	rnf17	100	63.973	ENSPLAG00000006198	rnf17	90	64.110	Poecilia_latipinna
ENSSDUG00000013530	rnf17	99	65.495	ENSPMEG00000022432	rnf17	98	65.997	Poecilia_mexicana
ENSSDUG00000013530	rnf17	80	66.667	ENSPREG00000001414	rnf17	79	66.667	Poecilia_reticulata
ENSSDUG00000013530	rnf17	96	32.006	ENSPPYG00000005215	RNF17	69	34.813	Pongo_abelii
ENSSDUG00000013530	rnf17	58	30.252	ENSPCOG00000020211	RNF17	69	42.500	Propithecus_coquereli
ENSSDUG00000013530	rnf17	74	47.727	ENSPVAG00000013021	RNF17	67	47.727	Pteropus_vampyrus
ENSSDUG00000013530	rnf17	90	51.423	ENSPNAG00000027505	rnf17	92	51.331	Pygocentrus_nattereri
ENSSDUG00000013530	rnf17	77	34.982	ENSRNOG00000008059	Rnf17	70	33.973	Rattus_norvegicus
ENSSDUG00000013530	rnf17	96	30.228	ENSRBIG00000027010	RNF17	75	32.417	Rhinopithecus_bieti
ENSSDUG00000013530	rnf17	96	31.250	ENSRROG00000022801	RNF17	83	33.969	Rhinopithecus_roxellana
ENSSDUG00000013530	rnf17	96	31.190	ENSSBOG00000021661	RNF17	83	34.142	Saimiri_boliviensis_boliviensis
ENSSDUG00000013530	rnf17	97	32.005	ENSSHAG00000005609	RNF17	85	32.094	Sarcophilus_harrisii
ENSSDUG00000013530	rnf17	77	43.945	ENSSFOG00015023037	rnf17	81	43.486	Scleropages_formosus
ENSSDUG00000013530	rnf17	100	70.063	ENSSMAG00000007429	rnf17	97	69.852	Scophthalmus_maximus
ENSSDUG00000013530	rnf17	100	93.649	ENSSLDG00000019577	rnf17	99	93.649	Seriola_lalandi_dorsalis
ENSSDUG00000013530	rnf17	69	35.106	ENSSARG00000003016	RNF17	60	35.106	Sorex_araneus
ENSSDUG00000013530	rnf17	96	32.393	ENSSPUG00000008917	RNF17	91	32.197	Sphenodon_punctatus
ENSSDUG00000013530	rnf17	98	72.122	ENSSPAG00000001925	rnf17	99	72.122	Stegastes_partitus
ENSSDUG00000013530	rnf17	92	31.716	ENSSSCG00000009572	RNF17	87	31.694	Sus_scrofa
ENSSDUG00000013530	rnf17	55	33.908	ENSTGUG00000011267	-	100	33.908	Taeniopygia_guttata
ENSSDUG00000013530	rnf17	97	54.381	ENSTRUG00000015498	rnf17	90	53.105	Takifugu_rubripes
ENSSDUG00000013530	rnf17	77	58.694	ENSTNIG00000015681	rnf17	92	58.694	Tetraodon_nigroviridis
ENSSDUG00000013530	rnf17	84	32.647	ENSTBEG00000000282	RNF17	72	32.647	Tupaia_belangeri
ENSSDUG00000013530	rnf17	50	36.269	ENSUMAG00000013953	-	87	33.036	Ursus_maritimus
ENSSDUG00000013530	rnf17	79	43.662	ENSVPAG00000011388	RNF17	65	43.662	Vicugna_pacos
ENSSDUG00000013530	rnf17	97	31.561	ENSVVUG00000006226	RNF17	70	33.695	Vulpes_vulpes
ENSSDUG00000013530	rnf17	72	31.285	ENSXETG00000034020	RNF17	90	31.762	Xenopus_tropicalis
ENSSDUG00000013530	rnf17	100	64.037	ENSXCOG00000018295	rnf17	98	64.890	Xiphophorus_couchianus
ENSSDUG00000013530	rnf17	100	65.759	ENSXMAG00000014747	rnf17	98	66.117	Xiphophorus_maculatus