EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013544 (Gene tree)
Gene ID: 111228685
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7414 bases
Position: chrBDQW01000017.1:922178-929591
Accession: 111228685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018543	RRM_1	PF00076.22	3.2e-87	1	6
ENSSDUP00000018543	RRM_1	PF00076.22	3.2e-87	2	6
ENSSDUP00000018543	RRM_1	PF00076.22	3.2e-87	3	6
ENSSDUP00000018543	RRM_1	PF00076.22	3.2e-87	4	6
ENSSDUP00000018543	RRM_1	PF00076.22	3.2e-87	5	6
ENSSDUP00000018543	RRM_1	PF00076.22	3.2e-87	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018880	-	2921	XM_022754693	ENSSDUP00000018543	908 (aa)	XP_022610414	-

Gene Model

Click here to download ENSSDUG00000013544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013544	rbm19	57	39.474	ENSSDUG00000014743	pabpc1l	60	39.474
ENSSDUG00000013544	rbm19	59	37.333	ENSSDUG00000011965	pabpc1b	57	37.333
ENSSDUG00000013544	rbm19	70	37.333	ENSSDUG00000006675	pabpc1a	57	37.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013544	rbm19	99	59.133	ENSG00000122965	RBM19	85	74.737	Homo_sapiens
ENSSDUG00000013544	rbm19	100	86.099	ENSAPOG00000010507	rbm19	100	85.991	Acanthochromis_polyacanthus
ENSSDUG00000013544	rbm19	99	57.438	ENSAMEG00000008544	RBM19	99	57.851	Ailuropoda_melanoleuca
ENSSDUG00000013544	rbm19	98	84.708	ENSACIG00000017780	rbm19	99	85.039	Amphilophus_citrinellus
ENSSDUG00000013544	rbm19	100	86.774	ENSAOCG00000008554	rbm19	100	86.667	Amphiprion_ocellaris
ENSSDUG00000013544	rbm19	97	85.161	ENSAPEG00000022381	rbm19	96	85.017	Amphiprion_percula
ENSSDUG00000013544	rbm19	99	86.507	ENSATEG00000007000	rbm19	99	85.839	Anabas_testudineus
ENSSDUG00000013544	rbm19	98	56.304	ENSAPLG00000015319	RBM19	77	56.808	Anas_platyrhynchos
ENSSDUG00000013544	rbm19	99	57.712	ENSACAG00000005065	RBM19	99	57.959	Anolis_carolinensis
ENSSDUG00000013544	rbm19	99	59.876	ENSANAG00000024136	RBM19	99	59.627	Aotus_nancymaae
ENSSDUG00000013544	rbm19	100	77.381	ENSACLG00000001399	rbm19	100	77.706	Astatotilapia_calliptera
ENSSDUG00000013544	rbm19	66	74.037	ENSAMXG00000017073	rbm19	99	64.018	Astyanax_mexicanus
ENSSDUG00000013544	rbm19	99	59.769	ENSBTAG00000031824	RBM19	99	60.021	Bos_taurus
ENSSDUG00000013544	rbm19	82	44.262	WBGene00004315	rbd-1	65	48.421	Caenorhabditis_elegans
ENSSDUG00000013544	rbm19	99	59.030	ENSCJAG00000009798	RBM19	99	59.298	Callithrix_jacchus
ENSSDUG00000013544	rbm19	99	58.118	ENSCAFG00000009146	RBM19	98	58.514	Canis_familiaris
ENSSDUG00000013544	rbm19	99	58.221	ENSCAFG00020017862	RBM19	98	58.617	Canis_lupus_dingo
ENSSDUG00000013544	rbm19	99	58.682	ENSCHIG00000014917	RBM19	99	59.519	Capra_hircus
ENSSDUG00000013544	rbm19	89	57.225	ENSTSYG00000007207	RBM19	96	57.339	Carlito_syrichta
ENSSDUG00000013544	rbm19	98	59.338	ENSCAPG00000006869	RBM19	98	59.130	Cavia_aperea
ENSSDUG00000013544	rbm19	99	59.830	ENSCPOG00000026629	RBM19	99	60.000	Cavia_porcellus
ENSSDUG00000013544	rbm19	84	52.473	ENSCCAG00000026637	-	99	52.295	Cebus_capucinus
ENSSDUG00000013544	rbm19	99	59.152	ENSCCAG00000021665	-	99	59.298	Cebus_capucinus
ENSSDUG00000013544	rbm19	98	58.534	ENSCATG00000035841	RBM19	99	58.534	Cercocebus_atys
ENSSDUG00000013544	rbm19	99	57.538	ENSCLAG00000009965	RBM19	99	58.599	Chinchilla_lanigera
ENSSDUG00000013544	rbm19	99	70.852	ENSCSAG00000002352	RBM19	95	70.852	Chlorocebus_sabaeus
ENSSDUG00000013544	rbm19	99	60.487	ENSCPBG00000011990	RBM19	99	60.526	Chrysemys_picta_bellii
ENSSDUG00000013544	rbm19	86	52.537	ENSCING00000023076	-	99	52.239	Ciona_intestinalis
ENSSDUG00000013544	rbm19	99	59.340	ENSCANG00000035927	RBM19	99	59.152	Colobus_angolensis_palliatus
ENSSDUG00000013544	rbm19	99	58.621	ENSCGRG00001000323	Rbm19	99	59.129	Cricetulus_griseus_chok1gshd
ENSSDUG00000013544	rbm19	99	58.621	ENSCGRG00000010371	Rbm19	99	59.129	Cricetulus_griseus_crigri
ENSSDUG00000013544	rbm19	100	78.807	ENSCSEG00000017436	rbm19	100	78.807	Cynoglossus_semilaevis
ENSSDUG00000013544	rbm19	100	78.425	ENSCVAG00000000300	rbm19	100	78.270	Cyprinodon_variegatus
ENSSDUG00000013544	rbm19	99	67.903	ENSDARG00000042590	rbm19	99	68.716	Danio_rerio
ENSSDUG00000013544	rbm19	99	57.351	ENSDNOG00000024534	RBM19	95	57.829	Dasypus_novemcinctus
ENSSDUG00000013544	rbm19	97	58.458	ENSDORG00000008549	Rbm19	100	58.307	Dipodomys_ordii
ENSSDUG00000013544	rbm19	98	39.532	FBgn0036018	CG3335	98	38.747	Drosophila_melanogaster
ENSSDUG00000013544	rbm19	65	79.710	ENSETEG00000016887	-	57	79.412	Echinops_telfairi
ENSSDUG00000013544	rbm19	85	42.840	ENSEBUG00000008521	-	99	42.317	Eptatretus_burgeri
ENSSDUG00000013544	rbm19	99	57.792	ENSEASG00005009452	RBM19	99	58.368	Equus_asinus_asinus
ENSSDUG00000013544	rbm19	99	57.835	ENSECAG00000023716	RBM19	99	58.707	Equus_caballus
ENSSDUG00000013544	rbm19	100	74.459	ENSELUG00000012561	rbm19	99	74.166	Esox_lucius
ENSSDUG00000013544	rbm19	99	58.115	ENSFCAG00000002962	RBM19	98	58.996	Felis_catus
ENSSDUG00000013544	rbm19	98	59.408	ENSFALG00000007768	RBM19	99	59.521	Ficedula_albicollis
ENSSDUG00000013544	rbm19	99	58.186	ENSFDAG00000004629	RBM19	99	58.498	Fukomys_damarensis
ENSSDUG00000013544	rbm19	100	78.209	ENSFHEG00000012578	rbm19	100	77.994	Fundulus_heteroclitus
ENSSDUG00000013544	rbm19	97	70.953	ENSGMOG00000013120	rbm19	100	70.843	Gadus_morhua
ENSSDUG00000013544	rbm19	98	58.646	ENSGALG00000008289	RBM19	99	58.848	Gallus_gallus
ENSSDUG00000013544	rbm19	100	79.396	ENSGAFG00000012337	rbm19	100	79.676	Gambusia_affinis
ENSSDUG00000013544	rbm19	99	81.553	ENSGACG00000009462	rbm19	100	83.188	Gasterosteus_aculeatus
ENSSDUG00000013544	rbm19	63	67.808	ENSGAGG00000019457	RBM19	99	67.979	Gopherus_agassizii
ENSSDUG00000013544	rbm19	99	59.876	ENSGGOG00000007371	RBM19	99	59.896	Gorilla_gorilla
ENSSDUG00000013544	rbm19	100	80.870	ENSHBUG00000009047	rbm19	100	80.870	Haplochromis_burtoni
ENSSDUG00000013544	rbm19	99	60.147	ENSHGLG00000010899	RBM19	99	60.042	Heterocephalus_glaber_female
ENSSDUG00000013544	rbm19	99	58.793	ENSHGLG00100017936	RBM19	99	59.320	Heterocephalus_glaber_male
ENSSDUG00000013544	rbm19	100	78.518	ENSHCOG00000016446	rbm19	100	78.625	Hippocampus_comes
ENSSDUG00000013544	rbm19	99	66.492	ENSIPUG00000023849	rbm19	100	66.453	Ictalurus_punctatus
ENSSDUG00000013544	rbm19	100	80.968	ENSKMAG00000014807	rbm19	100	80.430	Kryptolebias_marmoratus
ENSSDUG00000013544	rbm19	100	83.315	ENSLBEG00000012897	rbm19	100	83.423	Labrus_bergylta
ENSSDUG00000013544	rbm19	69	61.664	ENSLACG00000012030	RBM19	100	59.750	Latimeria_chalumnae
ENSSDUG00000013544	rbm19	99	66.844	ENSLOCG00000008341	rbm19	99	66.844	Lepisosteus_oculatus
ENSSDUG00000013544	rbm19	89	55.711	ENSLAFG00000004187	RBM19	100	56.993	Loxodonta_africana
ENSSDUG00000013544	rbm19	99	59.340	ENSMFAG00000046091	RBM19	99	57.579	Macaca_fascicularis
ENSSDUG00000013544	rbm19	99	59.443	ENSMMUG00000010496	RBM19	99	59.585	Macaca_mulatta
ENSSDUG00000013544	rbm19	99	55.266	ENSMNEG00000028452	RBM19	99	57.060	Macaca_nemestrina
ENSSDUG00000013544	rbm19	99	57.851	ENSMLEG00000034550	RBM19	98	58.031	Mandrillus_leucophaeus
ENSSDUG00000013544	rbm19	100	86.839	ENSMAMG00000014397	rbm19	100	86.933	Mastacembelus_armatus
ENSSDUG00000013544	rbm19	100	84.416	ENSMZEG00005016607	rbm19	100	84.091	Maylandia_zebra
ENSSDUG00000013544	rbm19	97	52.896	ENSMGAG00000010087	RBM19	100	53.669	Meleagris_gallopavo
ENSSDUG00000013544	rbm19	99	58.910	ENSMAUG00000019290	Rbm19	99	59.792	Mesocricetus_auratus
ENSSDUG00000013544	rbm19	99	58.653	ENSMICG00000014423	RBM19	99	59.232	Microcebus_murinus
ENSSDUG00000013544	rbm19	99	78.632	ENSMMOG00000017839	rbm19	99	78.846	Mola_mola
ENSSDUG00000013544	rbm19	99	60.042	ENSMODG00000003597	RBM19	99	60.063	Monodelphis_domestica
ENSSDUG00000013544	rbm19	100	83.585	ENSMALG00000012647	rbm19	100	83.801	Monopterus_albus
ENSSDUG00000013544	rbm19	99	59.378	MGP_CAROLIEiJ_G0027656	Rbm19	99	59.275	Mus_caroli
ENSSDUG00000013544	rbm19	99	58.921	ENSMUSG00000029594	Rbm19	99	59.855	Mus_musculus
ENSSDUG00000013544	rbm19	99	59.499	MGP_PahariEiJ_G0024238	Rbm19	99	60.083	Mus_pahari
ENSSDUG00000013544	rbm19	99	59.317	MGP_SPRETEiJ_G0028656	Rbm19	99	60.207	Mus_spretus
ENSSDUG00000013544	rbm19	99	58.247	ENSMPUG00000002694	RBM19	98	58.419	Mustela_putorius_furo
ENSSDUG00000013544	rbm19	99	58.512	ENSMLUG00000015075	RBM19	99	58.980	Myotis_lucifugus
ENSSDUG00000013544	rbm19	99	58.977	ENSNGAG00000009076	Rbm19	99	59.457	Nannospalax_galili
ENSSDUG00000013544	rbm19	100	80.586	ENSNBRG00000005913	rbm19	100	81.622	Neolamprologus_brichardi
ENSSDUG00000013544	rbm19	99	58.927	ENSNLEG00000000190	RBM19	99	58.945	Nomascus_leucogenys
ENSSDUG00000013544	rbm19	99	52.000	ENSMEUG00000004045	RBM19	91	60.435	Notamacropus_eugenii
ENSSDUG00000013544	rbm19	99	58.557	ENSOPRG00000012064	RBM19	99	59.240	Ochotona_princeps
ENSSDUG00000013544	rbm19	99	59.208	ENSODEG00000012977	RBM19	99	58.994	Octodon_degus
ENSSDUG00000013544	rbm19	99	79.707	ENSONIG00000013576	rbm19	100	84.189	Oreochromis_niloticus
ENSSDUG00000013544	rbm19	99	58.186	ENSOCUG00000009398	RBM19	99	57.917	Oryctolagus_cuniculus
ENSSDUG00000013544	rbm19	100	81.681	ENSORLG00000008077	rbm19	100	81.230	Oryzias_latipes
ENSSDUG00000013544	rbm19	99	81.868	ENSORLG00020013187	rbm19	100	81.107	Oryzias_latipes_hni
ENSSDUG00000013544	rbm19	100	81.985	ENSORLG00015001774	rbm19	100	81.446	Oryzias_latipes_hsok
ENSSDUG00000013544	rbm19	100	82.073	ENSOMEG00000003334	rbm19	100	81.641	Oryzias_melastigma
ENSSDUG00000013544	rbm19	89	56.831	ENSOGAG00000000602	RBM19	100	57.635	Otolemur_garnettii
ENSSDUG00000013544	rbm19	99	59.454	ENSOARG00000006827	RBM19	99	59.644	Ovis_aries
ENSSDUG00000013544	rbm19	99	59.381	ENSPPAG00000043712	RBM19	99	59.091	Pan_paniscus
ENSSDUG00000013544	rbm19	99	58.098	ENSPPRG00000023027	RBM19	98	58.682	Panthera_pardus
ENSSDUG00000013544	rbm19	99	55.579	ENSPTIG00000011096	RBM19	99	55.438	Panthera_tigris_altaica
ENSSDUG00000013544	rbm19	99	59.381	ENSPTRG00000005494	RBM19	99	58.988	Pan_troglodytes
ENSSDUG00000013544	rbm19	99	58.635	ENSPANG00000004795	RBM19	95	63.072	Papio_anubis
ENSSDUG00000013544	rbm19	99	66.847	ENSPKIG00000017095	rbm19	99	66.847	Paramormyrops_kingsleyae
ENSSDUG00000013544	rbm19	89	57.847	ENSPSIG00000008191	RBM19	99	58.161	Pelodiscus_sinensis
ENSSDUG00000013544	rbm19	88	80.650	ENSPMGG00000019087	rbm19	100	69.728	Periophthalmus_magnuspinnatus
ENSSDUG00000013544	rbm19	99	58.610	ENSPEMG00000018058	Rbm19	99	59.605	Peromyscus_maniculatus_bairdii
ENSSDUG00000013544	rbm19	99	58.646	ENSPCIG00000028861	RBM19	99	58.325	Phascolarctos_cinereus
ENSSDUG00000013544	rbm19	99	80.624	ENSPFOG00000015300	rbm19	99	80.624	Poecilia_formosa
ENSSDUG00000013544	rbm19	100	81.163	ENSPLAG00000000059	rbm19	100	81.055	Poecilia_latipinna
ENSSDUG00000013544	rbm19	99	81.081	ENSPMEG00000018585	rbm19	99	80.865	Poecilia_mexicana
ENSSDUG00000013544	rbm19	100	81.425	ENSPREG00000000978	rbm19	100	81.425	Poecilia_reticulata
ENSSDUG00000013544	rbm19	99	57.629	ENSPPYG00000004993	RBM19	99	57.172	Pongo_abelii
ENSSDUG00000013544	rbm19	58	65.022	ENSPCAG00000005063	-	58	65.022	Procavia_capensis
ENSSDUG00000013544	rbm19	99	58.342	ENSPCOG00000016190	RBM19	99	58.402	Propithecus_coquereli
ENSSDUG00000013544	rbm19	99	57.673	ENSPVAG00000011618	RBM19	99	57.113	Pteropus_vampyrus
ENSSDUG00000013544	rbm19	100	80.769	ENSPNYG00000017434	rbm19	100	81.090	Pundamilia_nyererei
ENSSDUG00000013544	rbm19	99	66.842	ENSPNAG00000012069	rbm19	99	67.437	Pygocentrus_nattereri
ENSSDUG00000013544	rbm19	99	59.110	ENSRNOG00000001397	Rbm19	99	59.834	Rattus_norvegicus
ENSSDUG00000013544	rbm19	99	59.091	ENSRBIG00000041419	RBM19	99	58.781	Rhinopithecus_bieti
ENSSDUG00000013544	rbm19	99	58.988	ENSRROG00000031938	RBM19	99	59.607	Rhinopithecus_roxellana
ENSSDUG00000013544	rbm19	72	37.476	YPR112C	-	72	37.044	Saccharomyces_cerevisiae
ENSSDUG00000013544	rbm19	99	57.808	ENSSBOG00000021434	-	99	58.471	Saimiri_boliviensis_boliviensis
ENSSDUG00000013544	rbm19	88	51.995	ENSSBOG00000022679	-	99	50.286	Saimiri_boliviensis_boliviensis
ENSSDUG00000013544	rbm19	99	59.029	ENSSHAG00000012256	RBM19	99	59.329	Sarcophilus_harrisii
ENSSDUG00000013544	rbm19	99	64.819	ENSSFOG00015005124	rbm19	99	64.606	Scleropages_formosus
ENSSDUG00000013544	rbm19	100	86.266	ENSSMAG00000011828	rbm19	100	85.515	Scophthalmus_maximus
ENSSDUG00000013544	rbm19	91	93.548	ENSSLDG00000025413	rbm19	100	84.004	Seriola_lalandi_dorsalis
ENSSDUG00000013544	rbm19	63	67.354	ENSSPUG00000011064	RBM19	100	67.354	Sphenodon_punctatus
ENSSDUG00000013544	rbm19	97	80.574	ENSSPAG00000018685	rbm19	98	81.655	Stegastes_partitus
ENSSDUG00000013544	rbm19	99	60.000	ENSSSCG00000009868	RBM19	99	60.212	Sus_scrofa
ENSSDUG00000013544	rbm19	100	59.459	ENSTGUG00000009017	RBM19	99	59.044	Taeniopygia_guttata
ENSSDUG00000013544	rbm19	99	76.638	ENSTRUG00000016032	rbm19	99	76.539	Takifugu_rubripes
ENSSDUG00000013544	rbm19	75	70.323	ENSTBEG00000000703	RBM19	75	70.323	Tupaia_belangeri
ENSSDUG00000013544	rbm19	83	60.131	ENSTTRG00000003987	RBM19	84	60.855	Tursiops_truncatus
ENSSDUG00000013544	rbm19	98	57.769	ENSUAMG00000002076	RBM19	98	58.516	Ursus_americanus
ENSSDUG00000013544	rbm19	99	58.101	ENSUMAG00000010816	RBM19	99	58.824	Ursus_maritimus
ENSSDUG00000013544	rbm19	99	58.592	ENSVVUG00000007886	RBM19	98	58.927	Vulpes_vulpes
ENSSDUG00000013544	rbm19	99	57.692	ENSXETG00000017668	rbm19	99	58.654	Xenopus_tropicalis
ENSSDUG00000013544	rbm19	100	78.427	ENSXCOG00000016995	rbm19	100	78.321	Xiphophorus_couchianus
ENSSDUG00000013544	rbm19	100	80.645	ENSXMAG00000007641	rbm19	100	80.645	Xiphophorus_maculatus