EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000013558 (Gene tree)
Gene ID
111229181
Gene Symbol
rab11bb
Alias
zgc:92772
Full Name
ras-related protein Rab-11B-like
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
6169 bases
Position
chrBDQW01000226.1:3770546-3776714
Accession
111229181
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000018552MMR_HSR1PF01926.233.1e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000018887-1941XM_022755395ENSSDUP00000018552218 (aa)XP_022611116UPI0000364045
Gene Model
Click here to download ENSSDUG00000013558's gene model file
Pathways
Pathway IDPathway NameSource
sdu04144EndocytosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013558's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000013558rab11bb8950.256ENSSDUG00000013724rab2a9650.256
ENSSDUG00000013558rab11bb8070.286ENSSDUG00000006260rab25b9070.286
ENSSDUG00000013558rab11bb7643.373ENSSDUG00000005627rab157843.373
ENSSDUG00000013558rab11bb7940.678ENSSDUG00000007575rab9b8640.678
ENSSDUG00000013558rab11bb9646.411ENSSDUG00000022535RAB1A9946.411
ENSSDUG00000013558rab11bb7133.540ENSSDUG00000006543RAB298033.540
ENSSDUG00000013558rab11bb5430.579ENSSDUG00000010935arl4d5930.579
ENSSDUG00000013558rab11bb7236.306ENSSDUG00000009251rab6bb7536.306
ENSSDUG00000013558rab11bb7845.614ENSSDUG00000005960rab18b8345.614
ENSSDUG00000013558rab11bb7430.061ENSSDUG00000007311rhebl18830.061
ENSSDUG00000013558rab11bb7434.356ENSSDUG00000010675si:ch73-116o1.27836.000
ENSSDUG00000013558rab11bb7333.125ENSSDUG00000009122rheb8633.125
ENSSDUG00000013558rab11bb7840.462ENSSDUG00000008151zgc:1015597440.462
ENSSDUG00000013558rab11bb9644.076ENSSDUG00000004445zgc:1719279944.076
ENSSDUG00000013558rab11bb7530.857ENSSDUG00000022959rasl11b6930.857
ENSSDUG00000013558rab11bb7237.580ENSSDUG00000013496-7537.580
ENSSDUG00000013558rab11bb8238.587ENSSDUG00000013968rab33a7638.587
ENSSDUG00000013558rab11bb5330.252ENSSDUG00000012868arl4cb6030.252
ENSSDUG00000013558rab11bb8046.023ENSSDUG00000014091-8346.023
ENSSDUG00000013558rab11bb7445.679ENSSDUG00000003823rab18a7945.679
ENSSDUG00000013558rab11bb7934.302ENSSDUG00000023508rab238034.031
ENSSDUG00000013558rab11bb9442.233ENSSDUG00000009835rab5aa9042.233
ENSSDUG00000013558rab11bb8341.530ENSSDUG00000011851rab42a8441.530
ENSSDUG00000013558rab11bb7752.096ENSSDUG00000013050-7852.096
ENSSDUG00000013558rab11bb8044.253ENSSDUG00000005719si:dkey-16l2.169840.191
ENSSDUG00000013558rab11bb9433.641ENSSDUG00000001791rab33ba9033.641
ENSSDUG00000013558rab11bb7737.500ENSSDUG00000014765rabl27237.500
ENSSDUG00000013558rab11bb7034.839ENSSDUG00000017779kras8735.928
ENSSDUG00000013558rab11bb7431.792ENSSDUG00000015078rasl11a6731.792
ENSSDUG00000013558rab11bb7035.256ENSSDUG00000010942rab34a5935.256
ENSSDUG00000013558rab11bb7752.695ENSSDUG00000004551rab147852.695
ENSSDUG00000013558rab11bb6642.667ENSSDUG00000019885-6242.667
ENSSDUG00000013558rab11bb10087.156ENSSDUG00000002580rab11a10087.156
ENSSDUG00000013558rab11bb9640.476ENSSDUG00000013325rab309740.476
ENSSDUG00000013558rab11bb9645.455ENSSDUG00000004698rab1ba9945.455
ENSSDUG00000013558rab11bb7742.012ENSSDUG00000006618RAB177442.012
ENSSDUG00000013558rab11bb9963.014ENSSDUG00000009735rab25a9963.014
ENSSDUG00000013558rab11bb9643.062ENSSDUG00000004950rab35b9943.062
ENSSDUG00000013558rab11bb7134.375ENSSDUG00000019738si:dkey-13a21.47834.375
ENSSDUG00000013558rab11bb7442.857ENSSDUG00000017131rab22a8342.857
ENSSDUG00000013558rab11bb10094.954ENSSDUG00000002965rab11ba10094.954
ENSSDUG00000013558rab11bb7432.934ENSSDUG00000014082si:cabz01085950.18232.934
ENSSDUG00000013558rab11bb7240.491ENSSDUG00000008011-7840.491
ENSSDUG00000013558rab11bb7238.217ENSSDUG00000018970RAB6B7438.217
ENSSDUG00000013558rab11bb7733.929ENSSDUG00000019086hrasb9235.000
ENSSDUG00000013558rab11bb9434.450ENSSDUG00000005037-9234.450
ENSSDUG00000013558rab11bb9744.651ENSSDUG00000016888rab1ab9939.918
ENSSDUG00000013558rab11bb9982.028ENSSDUG00000006278rab11al9982.028
ENSSDUG00000013558rab11bb7137.423ENSSDUG00000004119rab365237.423
ENSSDUG00000013558rab11bb7442.593ENSSDUG00000004633RAB157642.593
ENSSDUG00000013558rab11bb8932.000ENSSDUG00000021882rab6ba9232.000
ENSSDUG00000013558rab11bb7542.424ENSSDUG00000008505rab128437.500
ENSSDUG00000013558rab11bb10097.706ENSSDUG00000002934-10097.706
ENSSDUG00000013558rab11bb7947.399ENSSDUG00000006307-8747.399
ENSSDUG00000013558rab11bb7239.752ENSSDUG00000003386rab9a7939.752
ENSSDUG00000013558rab11bb7547.853ENSSDUG00000023008rab5c7447.853
ENSSDUG00000013558rab11bb7531.707ENSSDUG00000016858-8931.707
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000013558rab11bb100100.000ENSAPOG00000023455rab11bb100100.000Acanthochromis_polyacanthus
ENSSDUG00000013558rab11bb10087.156ENSACIG00000019631rab11bb10087.156Amphilophus_citrinellus
ENSSDUG00000013558rab11bb10097.706ENSACIG00000024376-10097.706Amphilophus_citrinellus
ENSSDUG00000013558rab11bb10097.706ENSAOCG00000018849-10097.706Amphiprion_ocellaris
ENSSDUG00000013558rab11bb100100.000ENSAOCG00000018239rab11bb100100.000Amphiprion_ocellaris
ENSSDUG00000013558rab11bb100100.000ENSAPEG00000016590rab11bb100100.000Amphiprion_percula
ENSSDUG00000013558rab11bb100100.000ENSATEG00000017696rab11bb100100.000Anabas_testudineus
ENSSDUG00000013558rab11bb10098.165ENSATEG00000023725-10098.165Anabas_testudineus
ENSSDUG00000013558rab11bb9498.058ENSAPLG00000011046-9498.058Anas_platyrhynchos
ENSSDUG00000013558rab11bb100100.000ENSACLG00000007076rab11bb100100.000Astatotilapia_calliptera
ENSSDUG00000013558rab11bb10097.706ENSACLG00000005446-10097.706Astatotilapia_calliptera
ENSSDUG00000013558rab11bb10098.624ENSAMXG00000042655rab11bb10098.624Astyanax_mexicanus
ENSSDUG00000013558rab11bb10096.789ENSAMXG00000037623-10096.789Astyanax_mexicanus
ENSSDUG00000013558rab11bb10096.330ENSBTAG00000002475RAB11B10096.330Bos_taurus
ENSSDUG00000013558rab11bb9694.737ENSCHIG00000022426-9394.737Capra_hircus
ENSSDUG00000013558rab11bb10096.330ENSCATG00000029188-10096.330Cercocebus_atys
ENSSDUG00000013558rab11bb10097.248ENSCPBG00000017056-10097.248Chrysemys_picta_bellii
ENSSDUG00000013558rab11bb100100.000ENSCSEG00000012149rab11bb100100.000Cynoglossus_semilaevis
ENSSDUG00000013558rab11bb10097.248ENSCSEG00000007239-10097.248Cynoglossus_semilaevis
ENSSDUG00000013558rab11bb10096.789ENSCVAG00000019718-10096.789Cyprinodon_variegatus
ENSSDUG00000013558rab11bb10094.495ENSCVAG00000019751-10094.495Cyprinodon_variegatus
ENSSDUG00000013558rab11bb100100.000ENSCVAG00000017021-100100.000Cyprinodon_variegatus
ENSSDUG00000013558rab11bb10098.165ENSDARG00000090086rab11bb10098.165Danio_rerio
ENSSDUG00000013558rab11bb9994.931ENSETEG00000000905-9994.931Echinops_telfairi
ENSSDUG00000013558rab11bb9994.884ENSEASG00005003708-9994.884Equus_asinus_asinus
ENSSDUG00000013558rab11bb9994.884ENSECAG00000000716RAB11B9994.884Equus_caballus
ENSSDUG00000013558rab11bb10095.413ENSELUG00000000916-10095.413Esox_lucius
ENSSDUG00000013558rab11bb10098.165ENSELUG00000021148rab11bb10098.165Esox_lucius
ENSSDUG00000013558rab11bb10096.330ENSELUG00000020948-98100.000Esox_lucius
ENSSDUG00000013558rab11bb10097.248ENSFALG00000011828-10097.248Ficedula_albicollis
ENSSDUG00000013558rab11bb100100.000ENSFHEG00000018353rab11bb100100.000Fundulus_heteroclitus
ENSSDUG00000013558rab11bb10098.165ENSFHEG00000022676-10098.165Fundulus_heteroclitus
ENSSDUG00000013558rab11bb9993.519ENSGMOG00000009668-9993.519Gadus_morhua
ENSSDUG00000013558rab11bb10099.541ENSGMOG00000009211rab11bb10099.541Gadus_morhua
ENSSDUG00000013558rab11bb10097.248ENSGALG00000000613RAB11B10097.248Gallus_gallus
ENSSDUG00000013558rab11bb100100.000ENSGAFG00000007102rab11bb100100.000Gambusia_affinis
ENSSDUG00000013558rab11bb10099.541ENSGACG00000015479rab11bb10099.541Gasterosteus_aculeatus
ENSSDUG00000013558rab11bb10094.495ENSGACG00000013297-9994.495Gasterosteus_aculeatus
ENSSDUG00000013558rab11bb10096.330ENSGGOG00000014516RAB11B10096.330Gorilla_gorilla
ENSSDUG00000013558rab11bb10097.706ENSHBUG00000009947-10097.706Haplochromis_burtoni
ENSSDUG00000013558rab11bb100100.000ENSHBUG00000014777rab11bb100100.000Haplochromis_burtoni
ENSSDUG00000013558rab11bb10099.541ENSHCOG00000002423rab11bb10099.541Hippocampus_comes
ENSSDUG00000013558rab11bb10095.413ENSHCOG00000000954-10095.413Hippocampus_comes
ENSSDUG00000013558rab11bb10093.578ENSHCOG00000000985-10093.578Hippocampus_comes
ENSSDUG00000013558rab11bb10097.248ENSIPUG00000025100rab11b10097.248Ictalurus_punctatus
ENSSDUG00000013558rab11bb10099.083ENSIPUG00000019927rab11bb10099.083Ictalurus_punctatus
ENSSDUG00000013558rab11bb10097.706ENSKMAG00000006170-10097.706Kryptolebias_marmoratus
ENSSDUG00000013558rab11bb100100.000ENSKMAG00000009033rab11bb100100.000Kryptolebias_marmoratus
ENSSDUG00000013558rab11bb10089.450ENSLBEG00000005981-10089.450Labrus_bergylta
ENSSDUG00000013558rab11bb10099.541ENSLBEG00000015248rab11bb10099.541Labrus_bergylta
ENSSDUG00000013558rab11bb10096.789ENSLBEG00000004172-10096.789Labrus_bergylta
ENSSDUG00000013558rab11bb10097.248ENSLACG00000016857-10097.248Latimeria_chalumnae
ENSSDUG00000013558rab11bb10096.330ENSMFAG00000003654RAB11B10096.330Macaca_fascicularis
ENSSDUG00000013558rab11bb10096.330ENSMLEG00000030601-10096.330Mandrillus_leucophaeus
ENSSDUG00000013558rab11bb10096.789ENSMAMG00000018533-10096.789Mastacembelus_armatus
ENSSDUG00000013558rab11bb10099.541ENSMAMG00000006378rab11bb10099.541Mastacembelus_armatus
ENSSDUG00000013558rab11bb10097.706ENSMZEG00005010975-10097.706Maylandia_zebra
ENSSDUG00000013558rab11bb100100.000ENSMZEG00005003352rab11bb100100.000Maylandia_zebra
ENSSDUG00000013558rab11bb10096.330ENSMICG00000034065-10096.330Microcebus_murinus
ENSSDUG00000013558rab11bb9995.853ENSMMOG00000001238-9995.853Mola_mola
ENSSDUG00000013558rab11bb10097.706ENSMMOG00000001250-10097.706Mola_mola
ENSSDUG00000013558rab11bb94100.000ENSMMOG00000007917rab11bb100100.000Mola_mola
ENSSDUG00000013558rab11bb10097.248ENSMODG00000003841-10097.248Monodelphis_domestica
ENSSDUG00000013558rab11bb100100.000ENSMALG00000022187rab11bb100100.000Monopterus_albus
ENSSDUG00000013558rab11bb9487.923ENSMLUG00000006677-10087.923Myotis_lucifugus
ENSSDUG00000013558rab11bb10097.706ENSNBRG00000023885-10097.706Neolamprologus_brichardi
ENSSDUG00000013558rab11bb100100.000ENSNBRG00000000372rab11bb100100.000Neolamprologus_brichardi
ENSSDUG00000013558rab11bb10097.248ENSMEUG00000003686-10097.248Notamacropus_eugenii
ENSSDUG00000013558rab11bb100100.000ENSONIG00000010435rab11bb100100.000Oreochromis_niloticus
ENSSDUG00000013558rab11bb10097.706ENSONIG00000002544-10097.706Oreochromis_niloticus
ENSSDUG00000013558rab11bb5294.737ENSOANG00000031567-8294.737Ornithorhynchus_anatinus
ENSSDUG00000013558rab11bb10099.541ENSORLG00000013938rab11bb10099.541Oryzias_latipes
ENSSDUG00000013558rab11bb9995.853ENSORLG00000015284-7295.853Oryzias_latipes
ENSSDUG00000013558rab11bb9995.853ENSORLG00020020844RAB11B9995.853Oryzias_latipes_hni
ENSSDUG00000013558rab11bb10099.541ENSORLG00020019393rab11bb10099.541Oryzias_latipes_hni
ENSSDUG00000013558rab11bb10099.541ENSORLG00015020173rab11bb10099.541Oryzias_latipes_hsok
ENSSDUG00000013558rab11bb9995.853ENSORLG00015016999RAB11B9995.853Oryzias_latipes_hsok
ENSSDUG00000013558rab11bb100100.000ENSOMEG00000017806-100100.000Oryzias_melastigma
ENSSDUG00000013558rab11bb10096.789ENSOMEG00000002562-10096.789Oryzias_melastigma
ENSSDUG00000013558rab11bb10096.330ENSPPAG00000028589-10096.330Pan_paniscus
ENSSDUG00000013558rab11bb10096.330ENSPTRG00000010422RAB11B10096.330Pan_troglodytes
ENSSDUG00000013558rab11bb10096.330ENSPANG00000007765-10096.330Papio_anubis
ENSSDUG00000013558rab11bb10098.624ENSPKIG00000011703-10098.624Paramormyrops_kingsleyae
ENSSDUG00000013558rab11bb10099.083ENSPKIG00000011640rab11bb10099.083Paramormyrops_kingsleyae
ENSSDUG00000013558rab11bb9897.196ENSPKIG00000001389-6997.196Paramormyrops_kingsleyae
ENSSDUG00000013558rab11bb9893.151ENSPSIG00000010242-8593.151Pelodiscus_sinensis
ENSSDUG00000013558rab11bb100100.000ENSPMGG00000009435rab11bb100100.000Periophthalmus_magnuspinnatus
ENSSDUG00000013558rab11bb9993.088ENSPMGG00000014336-9993.088Periophthalmus_magnuspinnatus
ENSSDUG00000013558rab11bb10096.789ENSPMGG00000014333-10096.789Periophthalmus_magnuspinnatus
ENSSDUG00000013558rab11bb9795.755ENSPCIG00000020371-9995.755Phascolarctos_cinereus
ENSSDUG00000013558rab11bb100100.000ENSPFOG00000024114-100100.000Poecilia_formosa
ENSSDUG00000013558rab11bb10097.706ENSPFOG00000006224-10097.706Poecilia_formosa
ENSSDUG00000013558rab11bb10097.706ENSPLAG00000014207-10097.706Poecilia_latipinna
ENSSDUG00000013558rab11bb100100.000ENSPLAG00000001598rab11bb100100.000Poecilia_latipinna
ENSSDUG00000013558rab11bb100100.000ENSPMEG00000012389rab11bb100100.000Poecilia_mexicana
ENSSDUG00000013558rab11bb10097.706ENSPMEG00000007842-10097.706Poecilia_mexicana
ENSSDUG00000013558rab11bb10097.248ENSPREG00000006336-10097.248Poecilia_reticulata
ENSSDUG00000013558rab11bb100100.000ENSPREG00000014269rab11bb100100.000Poecilia_reticulata
ENSSDUG00000013558rab11bb100100.000ENSPNYG00000004098rab11bb100100.000Pundamilia_nyererei
ENSSDUG00000013558rab11bb10097.706ENSPNYG00000019611-10097.706Pundamilia_nyererei
ENSSDUG00000013558rab11bb10096.330ENSRROG00000037812-10096.330Rhinopithecus_roxellana
ENSSDUG00000013558rab11bb9796.226ENSSHAG00000006816-9796.226Sarcophilus_harrisii
ENSSDUG00000013558rab11bb10075.229ENSSFOG00015006245-10075.229Scleropages_formosus
ENSSDUG00000013558rab11bb10097.706ENSSFOG00015009042rab11bb10097.706Scleropages_formosus
ENSSDUG00000013558rab11bb10099.541ENSSMAG00000004922rab11bb10099.541Scophthalmus_maximus
ENSSDUG00000013558rab11bb10094.954ENSSMAG00000018613-10094.954Scophthalmus_maximus
ENSSDUG00000013558rab11bb100100.000ENSSLDG00000020676rab11bb100100.000Seriola_lalandi_dorsalis
ENSSDUG00000013558rab11bb10097.706ENSSLDG00000005275-10097.706Seriola_lalandi_dorsalis
ENSSDUG00000013558rab11bb10096.789ENSSPUG00000002243-10096.789Sphenodon_punctatus
ENSSDUG00000013558rab11bb100100.000ENSSPAG00000011419rab11bb100100.000Stegastes_partitus
ENSSDUG00000013558rab11bb10097.706ENSSPAG00000014559-10097.706Stegastes_partitus
ENSSDUG00000013558rab11bb10097.248ENSTGUG00000000084-10097.248Taeniopygia_guttata
ENSSDUG00000013558rab11bb9997.685ENSTRUG00000021619-10097.685Takifugu_rubripes
ENSSDUG00000013558rab11bb9994.931ENSTRUG00000021614-9994.931Takifugu_rubripes
ENSSDUG00000013558rab11bb100100.000ENSTRUG00000022029rab11bb100100.000Takifugu_rubripes
ENSSDUG00000013558rab11bb9396.552ENSTNIG00000002003-10096.552Tetraodon_nigroviridis
ENSSDUG00000013558rab11bb10098.624ENSTNIG00000011081rab11bb10098.624Tetraodon_nigroviridis
ENSSDUG00000013558rab11bb9994.470ENSTNIG00000013184-9994.470Tetraodon_nigroviridis
ENSSDUG00000013558rab11bb9997.685ENSTNIG00000013182-10097.685Tetraodon_nigroviridis
ENSSDUG00000013558rab11bb9497.073ENSUAMG00000006639-9997.073Ursus_americanus
ENSSDUG00000013558rab11bb10097.260ENSXETG00000025484rab11b.19997.260Xenopus_tropicalis
ENSSDUG00000013558rab11bb10097.706ENSXCOG00000009190-10097.706Xiphophorus_couchianus
ENSSDUG00000013558rab11bb100100.000ENSXCOG00000008042-100100.000Xiphophorus_couchianus
ENSSDUG00000013558rab11bb100100.000ENSXMAG00000011926rab11bb100100.000Xiphophorus_maculatus
ENSSDUG00000013558rab11bb10097.248ENSXMAG00000024840-10097.248Xiphophorus_maculatus

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