EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 17728 bases
Position: chrBDQW01000784.1:19752-37479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018554	PARP	PF00644.20	1.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018889	-	2995	-	ENSSDUP00000018554	655 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000013560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013560	-	90	30.979	ENSSDUG00000001575	-	78	46.829
ENSSDUG00000013560	-	96	40.157	ENSSDUG00000009289	si:ch211-219a4.3	56	40.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013560	-	82	70.577	ENSAPOG00000002274	-	51	70.577	Acanthochromis_polyacanthus
ENSSDUG00000013560	-	95	70.113	ENSAOCG00000020608	-	100	67.547	Amphiprion_ocellaris
ENSSDUG00000013560	-	71	70.194	ENSAPEG00000022069	-	100	70.194	Amphiprion_percula
ENSSDUG00000013560	-	63	68.510	ENSATEG00000012173	-	99	68.510	Anabas_testudineus
ENSSDUG00000013560	-	56	70.081	ENSACLG00000005627	-	96	70.081	Astatotilapia_calliptera
ENSSDUG00000013560	-	52	70.760	ENSACLG00000005600	-	100	70.760	Astatotilapia_calliptera
ENSSDUG00000013560	-	91	44.762	ENSAMXG00000010209	-	53	34.591	Astyanax_mexicanus
ENSSDUG00000013560	-	62	49.878	ENSAMXG00000031328	-	99	49.878	Astyanax_mexicanus
ENSSDUG00000013560	-	95	56.101	ENSAMXG00000010091	-	89	56.101	Astyanax_mexicanus
ENSSDUG00000013560	-	50	70.427	ENSCSEG00000009834	-	99	70.427	Cynoglossus_semilaevis
ENSSDUG00000013560	-	93	64.706	ENSCVAG00000009352	-	88	66.667	Cyprinodon_variegatus
ENSSDUG00000013560	-	78	30.402	ENSDARG00000098398	CABZ01079480.1	99	30.402	Danio_rerio
ENSSDUG00000013560	-	95	55.183	ENSDARG00000112454	FO744833.2	57	54.675	Danio_rerio
ENSSDUG00000013560	-	93	32.749	ENSELUG00000004826	-	54	32.749	Esox_lucius
ENSSDUG00000013560	-	98	61.077	ENSELUG00000013643	-	89	61.077	Esox_lucius
ENSSDUG00000013560	-	52	75.000	ENSHBUG00000013327	-	87	75.000	Haplochromis_burtoni
ENSSDUG00000013560	-	56	69.542	ENSHBUG00000015143	-	99	69.542	Haplochromis_burtoni
ENSSDUG00000013560	-	99	55.807	ENSIPUG00000019562	-	91	60.513	Ictalurus_punctatus
ENSSDUG00000013560	-	98	69.147	ENSKMAG00000010882	-	94	70.647	Kryptolebias_marmoratus
ENSSDUG00000013560	-	98	70.561	ENSLBEG00000026419	-	52	70.561	Labrus_bergylta
ENSSDUG00000013560	-	56	75.610	ENSMAMG00000018192	-	98	75.610	Mastacembelus_armatus
ENSSDUG00000013560	-	76	72.709	ENSMZEG00005027852	-	100	72.709	Maylandia_zebra
ENSSDUG00000013560	-	62	69.024	ENSMZEG00005002038	-	96	69.024	Maylandia_zebra
ENSSDUG00000013560	-	92	58.911	ENSMZEG00005002061	-	53	58.911	Maylandia_zebra
ENSSDUG00000013560	-	58	73.684	ENSMMOG00000010419	-	99	69.388	Mola_mola
ENSSDUG00000013560	-	60	76.010	ENSMALG00000004165	-	99	76.010	Monopterus_albus
ENSSDUG00000013560	-	81	60.714	ENSNBRG00000002998	-	100	69.597	Neolamprologus_brichardi
ENSSDUG00000013560	-	93	68.937	ENSONIG00000000234	-	54	68.937	Oreochromis_niloticus
ENSSDUG00000013560	-	77	72.475	ENSONIG00000000241	-	99	72.475	Oreochromis_niloticus
ENSSDUG00000013560	-	95	63.621	ENSORLG00000017404	-	83	71.429	Oryzias_latipes
ENSSDUG00000013560	-	98	61.610	ENSORLG00000017386	-	56	61.610	Oryzias_latipes
ENSSDUG00000013560	-	71	63.147	ENSORLG00020014210	-	100	63.147	Oryzias_latipes_hni
ENSSDUG00000013560	-	80	55.513	ENSORLG00020014046	-	100	66.016	Oryzias_latipes_hni
ENSSDUG00000013560	-	73	65.979	ENSORLG00015004157	-	100	67.188	Oryzias_latipes_hsok
ENSSDUG00000013560	-	95	63.833	ENSORLG00015004253	-	96	61.149	Oryzias_latipes_hsok
ENSSDUG00000013560	-	75	62.500	ENSOMEG00000009483	-	86	64.118	Oryzias_melastigma
ENSSDUG00000013560	-	92	31.959	ENSPKIG00000004064	-	86	42.623	Paramormyrops_kingsleyae
ENSSDUG00000013560	-	60	69.091	ENSPLAG00000022742	-	93	69.091	Poecilia_latipinna
ENSSDUG00000013560	-	51	69.254	ENSPMEG00000003192	-	100	69.254	Poecilia_mexicana
ENSSDUG00000013560	-	78	69.061	ENSPREG00000017145	-	100	68.132	Poecilia_reticulata
ENSSDUG00000013560	-	51	73.952	ENSPNYG00000003575	-	100	73.952	Pundamilia_nyererei
ENSSDUG00000013560	-	89	55.351	ENSPNYG00000006865	-	83	55.518	Pundamilia_nyererei
ENSSDUG00000013560	-	82	35.185	ENSPNAG00000005968	-	54	39.086	Pygocentrus_nattereri
ENSSDUG00000013560	-	59	66.327	ENSPNAG00000026750	-	92	66.327	Pygocentrus_nattereri
ENSSDUG00000013560	-	92	32.716	ENSSFOG00015019732	-	83	39.487	Scleropages_formosus
ENSSDUG00000013560	-	98	75.272	ENSSMAG00000016922	-	81	80.808	Scophthalmus_maximus
ENSSDUG00000013560	-	95	56.667	ENSSPAG00000014708	-	94	79.592	Stegastes_partitus
ENSSDUG00000013560	-	94	56.543	ENSTRUG00000003423	-	51	55.608	Takifugu_rubripes
ENSSDUG00000013560	-	77	57.256	ENSTNIG00000018877	-	100	57.256	Tetraodon_nigroviridis
ENSSDUG00000013560	-	78	69.613	ENSXCOG00000012535	-	100	68.132	Xiphophorus_couchianus
ENSSDUG00000013560	-	91	67.731	ENSXMAG00000015158	-	99	70.455	Xiphophorus_maculatus