EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013674 (Gene tree)
Gene ID: 111233422
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 9200 bases
Position: chrBDQW01000391.1:659292-668491
Accession: 111233422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018746	HARE-HTH	PF05066.13	1.4e-15	1	1
ENSSDUP00000018810	HARE-HTH	PF05066.13	1.4e-15	1	1
ENSSDUP00000018784	HARE-HTH	PF05066.13	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019149	-	1623	-	ENSSDUP00000018810	540 (aa)	-	-
ENSSDUT00000019083	-	5209	XM_022761223	ENSSDUP00000018746	546 (aa)	XP_022616944	UPI000BBEA125
ENSSDUT00000019123	-	5162	XM_022761225	ENSSDUP00000018784	545 (aa)	XP_022616946	UPI000BBEFBD2

Gene Model

Click here to download ENSSDUG00000013674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013674's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013674	tbrg1	99	94.669	ENSAPOG00000017352	tbrg1	99	94.669	Acanthochromis_polyacanthus
ENSSDUG00000013674	tbrg1	94	88.976	ENSACIG00000021274	tbrg1	94	89.484	Amphilophus_citrinellus
ENSSDUG00000013674	tbrg1	99	93.934	ENSAOCG00000018605	tbrg1	99	93.934	Amphiprion_ocellaris
ENSSDUG00000013674	tbrg1	99	93.934	ENSAPEG00000022443	tbrg1	99	93.934	Amphiprion_percula
ENSSDUG00000013674	tbrg1	99	94.301	ENSATEG00000023537	tbrg1	99	94.301	Anabas_testudineus
ENSSDUG00000013674	tbrg1	99	92.096	ENSACLG00000000281	tbrg1	99	92.096	Astatotilapia_calliptera
ENSSDUG00000013674	tbrg1	99	71.609	ENSAMXG00000008381	tbrg1	99	71.609	Astyanax_mexicanus
ENSSDUG00000013674	tbrg1	99	90.092	ENSCSEG00000002445	tbrg1	99	90.092	Cynoglossus_semilaevis
ENSSDUG00000013674	tbrg1	99	84.278	ENSCVAG00000019626	tbrg1	99	84.278	Cyprinodon_variegatus
ENSSDUG00000013674	tbrg1	99	71.587	ENSDARG00000074996	tbrg1	99	70.857	Danio_rerio
ENSSDUG00000013674	tbrg1	91	49.606	ENSEBUG00000014060	tbrg1	89	49.482	Eptatretus_burgeri
ENSSDUG00000013674	tbrg1	100	79.781	ENSELUG00000017458	tbrg1	99	79.781	Esox_lucius
ENSSDUG00000013674	tbrg1	88	80.122	ENSFHEG00000004283	tbrg1	92	80.122	Fundulus_heteroclitus
ENSSDUG00000013674	tbrg1	99	85.375	ENSGAFG00000000204	tbrg1	99	85.375	Gambusia_affinis
ENSSDUG00000013674	tbrg1	99	92.096	ENSHBUG00000004935	tbrg1	99	92.096	Haplochromis_burtoni
ENSSDUG00000013674	tbrg1	99	80.616	ENSHCOG00000010588	tbrg1	99	79.529	Hippocampus_comes
ENSSDUG00000013674	tbrg1	99	71.560	ENSIPUG00000008697	tbrg1	98	71.481	Ictalurus_punctatus
ENSSDUG00000013674	tbrg1	99	86.422	ENSKMAG00000002775	tbrg1	99	86.422	Kryptolebias_marmoratus
ENSSDUG00000013674	tbrg1	100	90.826	ENSLBEG00000017559	tbrg1	99	88.469	Labrus_bergylta
ENSSDUG00000013674	tbrg1	99	74.771	ENSLOCG00000003093	tbrg1	98	74.771	Lepisosteus_oculatus
ENSSDUG00000013674	tbrg1	99	92.831	ENSMAMG00000000876	tbrg1	99	92.831	Mastacembelus_armatus
ENSSDUG00000013674	tbrg1	99	91.912	ENSMZEG00005013545	tbrg1	92	91.912	Maylandia_zebra
ENSSDUG00000013674	tbrg1	95	84.540	ENSMMOG00000005314	tbrg1	93	86.417	Mola_mola
ENSSDUG00000013674	tbrg1	94	92.564	ENSMALG00000011630	tbrg1	99	92.564	Monopterus_albus
ENSSDUG00000013674	tbrg1	98	90.824	ENSNBRG00000017490	tbrg1	99	90.824	Neolamprologus_brichardi
ENSSDUG00000013674	tbrg1	99	92.463	ENSONIG00000005284	tbrg1	99	92.463	Oreochromis_niloticus
ENSSDUG00000013674	tbrg1	99	84.926	ENSORLG00000014519	tbrg1	99	84.926	Oryzias_latipes
ENSSDUG00000013674	tbrg1	99	84.375	ENSORLG00020009567	tbrg1	99	84.375	Oryzias_latipes_hni
ENSSDUG00000013674	tbrg1	99	84.375	ENSORLG00015000448	tbrg1	99	84.375	Oryzias_latipes_hsok
ENSSDUG00000013674	tbrg1	99	86.397	ENSOMEG00000006130	tbrg1	99	86.397	Oryzias_melastigma
ENSSDUG00000013674	tbrg1	97	72.264	ENSPKIG00000012274	tbrg1	90	72.264	Paramormyrops_kingsleyae
ENSSDUG00000013674	tbrg1	99	81.013	ENSPMGG00000015968	tbrg1	99	81.374	Periophthalmus_magnuspinnatus
ENSSDUG00000013674	tbrg1	99	85.740	ENSPFOG00000004279	tbrg1	99	85.740	Poecilia_formosa
ENSSDUG00000013674	tbrg1	99	85.740	ENSPLAG00000001227	tbrg1	99	85.740	Poecilia_latipinna
ENSSDUG00000013674	tbrg1	99	85.558	ENSPMEG00000000955	tbrg1	99	85.558	Poecilia_mexicana
ENSSDUG00000013674	tbrg1	99	84.826	ENSPREG00000005246	tbrg1	99	84.826	Poecilia_reticulata
ENSSDUG00000013674	tbrg1	87	91.597	ENSPNYG00000012625	tbrg1	99	91.597	Pundamilia_nyererei
ENSSDUG00000013674	tbrg1	98	71.429	ENSPNAG00000028332	tbrg1	99	71.881	Pygocentrus_nattereri
ENSSDUG00000013674	tbrg1	92	76.923	ENSSFOG00015009308	tbrg1	86	76.923	Scleropages_formosus
ENSSDUG00000013674	tbrg1	99	91.376	ENSSMAG00000002529	tbrg1	99	91.376	Scophthalmus_maximus
ENSSDUG00000013674	tbrg1	95	100.000	ENSSLDG00000008932	tbrg1	98	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000013674	tbrg1	86	92.521	ENSSPAG00000004808	tbrg1	100	92.521	Stegastes_partitus
ENSSDUG00000013674	tbrg1	95	83.946	ENSTRUG00000005960	tbrg1	98	83.946	Takifugu_rubripes
ENSSDUG00000013674	tbrg1	99	85.192	ENSXMAG00000001551	tbrg1	99	85.192	Xiphophorus_maculatus