EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013854 (Gene tree)
Gene ID: -
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8639 bases
Position: chrBDQW01000008.1:40912-49550
Accession: 111222755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018972	PC4	PF02229.16	8.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019312	-	2076	XM_022746595	ENSSDUP00000018972	164 (aa)	XP_022602316	-

Gene Model

Click here to download ENSSDUG00000013854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013854	sub1b	76	73.228	ENSG00000113387	SUB1	100	73.228	Homo_sapiens
ENSSDUG00000013854	sub1b	76	92.000	ENSAPOG00000005917	SUB1	100	92.000	Acanthochromis_polyacanthus
ENSSDUG00000013854	sub1b	76	72.441	ENSAMEG00000006238	SUB1	95	72.441	Ailuropoda_melanoleuca
ENSSDUG00000013854	sub1b	76	96.800	ENSACIG00000015976	sub1b	100	96.800	Amphilophus_citrinellus
ENSSDUG00000013854	sub1b	70	88.696	ENSAOCG00000007313	-	83	95.098	Amphiprion_ocellaris
ENSSDUG00000013854	sub1b	68	78.378	ENSAOCG00000002323	-	86	79.245	Amphiprion_ocellaris
ENSSDUG00000013854	sub1b	76	96.000	ENSAPEG00000024347	sub1b	100	96.000	Amphiprion_percula
ENSSDUG00000013854	sub1b	72	74.576	ENSAPEG00000017151	-	76	83.673	Amphiprion_percula
ENSSDUG00000013854	sub1b	76	94.400	ENSATEG00000010340	sub1b	100	94.400	Anabas_testudineus
ENSSDUG00000013854	sub1b	76	64.662	ENSACAG00000007974	SUB1	100	67.669	Anolis_carolinensis
ENSSDUG00000013854	sub1b	76	73.016	ENSANAG00000023392	-	83	71.429	Aotus_nancymaae
ENSSDUG00000013854	sub1b	76	73.228	ENSANAG00000011651	-	100	73.228	Aotus_nancymaae
ENSSDUG00000013854	sub1b	76	96.800	ENSACLG00000016875	sub1b	64	96.800	Astatotilapia_calliptera
ENSSDUG00000013854	sub1b	76	83.333	ENSAMXG00000037104	sub1b	100	83.333	Astyanax_mexicanus
ENSSDUG00000013854	sub1b	82	70.504	ENSBTAG00000021965	SUB1	100	73.228	Bos_taurus
ENSSDUG00000013854	sub1b	61	73.529	ENSCJAG00000018718	SUB1	98	73.529	Callithrix_jacchus
ENSSDUG00000013854	sub1b	76	65.600	ENSCAFG00000024488	-	100	68.254	Canis_familiaris
ENSSDUG00000013854	sub1b	76	72.441	ENSCAFG00000018879	-	88	72.441	Canis_familiaris
ENSSDUG00000013854	sub1b	76	72.441	ENSCAFG00000016713	-	96	72.441	Canis_familiaris
ENSSDUG00000013854	sub1b	76	71.875	ENSCAFG00020011479	-	77	71.875	Canis_lupus_dingo
ENSSDUG00000013854	sub1b	76	72.441	ENSCAFG00020016840	-	100	72.441	Canis_lupus_dingo
ENSSDUG00000013854	sub1b	76	73.228	ENSCHIG00000008460	SUB1	100	73.228	Capra_hircus
ENSSDUG00000013854	sub1b	76	64.567	ENSTSYG00000035366	-	83	66.142	Carlito_syrichta
ENSSDUG00000013854	sub1b	76	67.692	ENSTSYG00000014069	-	93	68.462	Carlito_syrichta
ENSSDUG00000013854	sub1b	76	73.228	ENSTSYG00000029948	-	100	73.228	Carlito_syrichta
ENSSDUG00000013854	sub1b	76	73.228	ENSCPOG00000031334	SUB1	100	73.228	Cavia_porcellus
ENSSDUG00000013854	sub1b	76	68.504	ENSCCAG00000020604	-	100	66.929	Cebus_capucinus
ENSSDUG00000013854	sub1b	76	70.866	ENSCCAG00000033751	-	95	70.866	Cebus_capucinus
ENSSDUG00000013854	sub1b	76	73.228	ENSCCAG00000023605	-	100	73.228	Cebus_capucinus
ENSSDUG00000013854	sub1b	76	67.460	ENSCCAG00000017043	-	93	65.873	Cebus_capucinus
ENSSDUG00000013854	sub1b	74	75.610	ENSCATG00000031199	SUB1	100	73.228	Cercocebus_atys
ENSSDUG00000013854	sub1b	76	71.875	ENSCLAG00000007522	SUB1	100	72.656	Chinchilla_lanigera
ENSSDUG00000013854	sub1b	76	72.441	ENSCSAG00000019449	-	100	70.866	Chlorocebus_sabaeus
ENSSDUG00000013854	sub1b	76	73.228	ENSCSAG00000017172	-	100	73.228	Chlorocebus_sabaeus
ENSSDUG00000013854	sub1b	76	77.778	ENSCPBG00000024218	SUB1	79	73.228	Chrysemys_picta_bellii
ENSSDUG00000013854	sub1b	76	63.492	ENSCANG00000028665	-	92	61.240	Colobus_angolensis_palliatus
ENSSDUG00000013854	sub1b	76	73.228	ENSCANG00000029372	SUB1	100	73.228	Colobus_angolensis_palliatus
ENSSDUG00000013854	sub1b	76	62.992	ENSCGRG00001014660	-	100	59.055	Cricetulus_griseus_chok1gshd
ENSSDUG00000013854	sub1b	76	71.654	ENSCGRG00001003473	-	100	71.654	Cricetulus_griseus_chok1gshd
ENSSDUG00000013854	sub1b	76	57.143	ENSCGRG00000001489	-	100	61.417	Cricetulus_griseus_crigri
ENSSDUG00000013854	sub1b	76	71.654	ENSCGRG00000001133	-	100	71.654	Cricetulus_griseus_crigri
ENSSDUG00000013854	sub1b	76	62.992	ENSCGRG00000019368	-	100	59.055	Cricetulus_griseus_crigri
ENSSDUG00000013854	sub1b	76	80.645	ENSDARG00000007720	sub1b	99	80.645	Danio_rerio
ENSSDUG00000013854	sub1b	76	78.226	ENSDARG00000053446	sub1a	100	83.200	Danio_rerio
ENSSDUG00000013854	sub1b	76	70.866	ENSDNOG00000040794	-	100	70.866	Dasypus_novemcinctus
ENSSDUG00000013854	sub1b	76	70.079	ENSDNOG00000032396	-	100	70.079	Dasypus_novemcinctus
ENSSDUG00000013854	sub1b	76	71.654	ENSDORG00000013916	Sub1	100	71.654	Dipodomys_ordii
ENSSDUG00000013854	sub1b	60	51.485	ENSEBUG00000008746	sub1a	53	51.485	Eptatretus_burgeri
ENSSDUG00000013854	sub1b	76	73.228	ENSEASG00005007099	SUB1	100	73.228	Equus_asinus_asinus
ENSSDUG00000013854	sub1b	76	73.228	ENSECAG00000012399	SUB1	100	73.228	Equus_caballus
ENSSDUG00000013854	sub1b	61	70.297	ENSEEUG00000000436	SUB1	99	72.277	Erinaceus_europaeus
ENSSDUG00000013854	sub1b	76	72.441	ENSFCAG00000037288	SUB1	100	72.441	Felis_catus
ENSSDUG00000013854	sub1b	76	76.984	ENSFALG00000002143	SUB1	87	73.016	Ficedula_albicollis
ENSSDUG00000013854	sub1b	76	73.228	ENSFDAG00000017179	SUB1	100	73.228	Fukomys_damarensis
ENSSDUG00000013854	sub1b	76	76.190	ENSGALG00000034905	-	100	72.222	Gallus_gallus
ENSSDUG00000013854	sub1b	76	78.571	ENSGALG00000003248	SUB1	100	74.603	Gallus_gallus
ENSSDUG00000013854	sub1b	76	46.032	ENSGALG00000027147	-	100	46.032	Gallus_gallus
ENSSDUG00000013854	sub1b	80	90.076	ENSGACG00000003912	sub1b	100	93.600	Gasterosteus_aculeatus
ENSSDUG00000013854	sub1b	76	78.571	ENSGAGG00000013535	SUB1	100	74.603	Gopherus_agassizii
ENSSDUG00000013854	sub1b	76	73.228	ENSGGOG00000040900	SUB1	100	73.228	Gorilla_gorilla
ENSSDUG00000013854	sub1b	63	96.117	ENSHBUG00000013953	sub1b	77	96.117	Haplochromis_burtoni
ENSSDUG00000013854	sub1b	76	73.228	ENSHGLG00000006749	SUB1	100	73.228	Heterocephalus_glaber_female
ENSSDUG00000013854	sub1b	76	73.228	ENSHGLG00100014344	SUB1	100	73.228	Heterocephalus_glaber_male
ENSSDUG00000013854	sub1b	76	89.600	ENSHCOG00000001809	sub1b	100	89.600	Hippocampus_comes
ENSSDUG00000013854	sub1b	76	77.344	ENSIPUG00000024367	SUB1	100	77.344	Ictalurus_punctatus
ENSSDUG00000013854	sub1b	76	81.600	ENSIPUG00000008166	sub1	100	81.600	Ictalurus_punctatus
ENSSDUG00000013854	sub1b	76	74.016	ENSSTOG00000019364	SUB1	100	74.016	Ictidomys_tridecemlineatus
ENSSDUG00000013854	sub1b	76	73.228	ENSJJAG00000018885	Sub1	100	71.654	Jaculus_jaculus
ENSSDUG00000013854	sub1b	76	89.516	ENSLBEG00000010728	sub1b	100	88.800	Labrus_bergylta
ENSSDUG00000013854	sub1b	79	79.231	ENSLOCG00000006692	sub1b	100	81.600	Lepisosteus_oculatus
ENSSDUG00000013854	sub1b	76	74.803	ENSLAFG00000032088	-	100	73.228	Loxodonta_africana
ENSSDUG00000013854	sub1b	76	74.803	ENSLAFG00000011006	-	100	73.228	Loxodonta_africana
ENSSDUG00000013854	sub1b	76	73.228	ENSMFAG00000040728	SUB1	100	73.228	Macaca_fascicularis
ENSSDUG00000013854	sub1b	76	64.567	ENSMFAG00000045643	-	61	64.567	Macaca_fascicularis
ENSSDUG00000013854	sub1b	76	73.228	ENSMMUG00000046181	SUB1	100	73.228	Macaca_mulatta
ENSSDUG00000013854	sub1b	76	73.228	ENSMNEG00000037046	SUB1	100	73.228	Macaca_nemestrina
ENSSDUG00000013854	sub1b	76	73.228	ENSMLEG00000037017	-	100	73.228	Mandrillus_leucophaeus
ENSSDUG00000013854	sub1b	78	55.814	ENSMLEG00000043436	-	92	60.465	Mandrillus_leucophaeus
ENSSDUG00000013854	sub1b	76	70.866	ENSMLEG00000030509	-	94	70.866	Mandrillus_leucophaeus
ENSSDUG00000013854	sub1b	76	96.800	ENSMAMG00000018428	sub1b	100	96.800	Mastacembelus_armatus
ENSSDUG00000013854	sub1b	76	96.800	ENSMZEG00005021252	sub1b	100	96.800	Maylandia_zebra
ENSSDUG00000013854	sub1b	76	78.571	ENSMGAG00000002906	SUB1	100	74.603	Meleagris_gallopavo
ENSSDUG00000013854	sub1b	80	46.269	ENSMGAG00000001200	-	100	45.522	Meleagris_gallopavo
ENSSDUG00000013854	sub1b	76	71.654	ENSMAUG00000020232	Sub1	100	71.654	Mesocricetus_auratus
ENSSDUG00000013854	sub1b	76	73.228	ENSMICG00000014535	SUB1	100	73.228	Microcebus_murinus
ENSSDUG00000013854	sub1b	76	65.354	ENSMOCG00000016424	-	100	57.937	Microtus_ochrogaster
ENSSDUG00000013854	sub1b	76	70.866	ENSMOCG00000018930	-	100	70.866	Microtus_ochrogaster
ENSSDUG00000013854	sub1b	63	75.962	ENSMODG00000020410	SUB1	75	75.962	Monodelphis_domestica
ENSSDUG00000013854	sub1b	91	87.333	ENSMALG00000007163	sub1b	97	87.333	Monopterus_albus
ENSSDUG00000013854	sub1b	76	71.654	MGP_CAROLIEiJ_G0019676	Sub1	100	71.654	Mus_caroli
ENSSDUG00000013854	sub1b	76	71.654	ENSMUSG00000022205	Sub1	100	71.654	Mus_musculus
ENSSDUG00000013854	sub1b	76	70.866	MGP_PahariEiJ_G0016056	Sub1	100	70.866	Mus_pahari
ENSSDUG00000013854	sub1b	76	71.654	MGP_SPRETEiJ_G0020573	Sub1	100	71.654	Mus_spretus
ENSSDUG00000013854	sub1b	76	71.654	ENSMPUG00000018418	-	100	71.654	Mustela_putorius_furo
ENSSDUG00000013854	sub1b	76	72.441	ENSMPUG00000015185	-	100	72.441	Mustela_putorius_furo
ENSSDUG00000013854	sub1b	76	73.228	ENSMLUG00000013685	-	96	72.093	Myotis_lucifugus
ENSSDUG00000013854	sub1b	76	71.654	ENSMLUG00000009236	-	95	70.079	Myotis_lucifugus
ENSSDUG00000013854	sub1b	76	65.873	ENSNGAG00000017212	-	100	59.200	Nannospalax_galili
ENSSDUG00000013854	sub1b	76	72.441	ENSNGAG00000014072	-	100	72.441	Nannospalax_galili
ENSSDUG00000013854	sub1b	76	70.635	ENSNGAG00000010782	-	84	69.048	Nannospalax_galili
ENSSDUG00000013854	sub1b	63	95.146	ENSNBRG00000008451	sub1b	84	95.146	Neolamprologus_brichardi
ENSSDUG00000013854	sub1b	76	73.228	ENSNLEG00000036068	SUB1	100	73.228	Nomascus_leucogenys
ENSSDUG00000013854	sub1b	76	70.635	ENSNLEG00000035968	-	100	69.048	Nomascus_leucogenys
ENSSDUG00000013854	sub1b	76	74.016	ENSNLEG00000018383	-	95	74.016	Nomascus_leucogenys
ENSSDUG00000013854	sub1b	76	76.190	ENSMEUG00000007770	SUB1	100	74.603	Notamacropus_eugenii
ENSSDUG00000013854	sub1b	76	71.654	ENSOPRG00000012887	SUB1	100	71.654	Ochotona_princeps
ENSSDUG00000013854	sub1b	76	73.228	ENSODEG00000001937	-	100	73.228	Octodon_degus
ENSSDUG00000013854	sub1b	65	68.519	ENSODEG00000015114	-	87	70.370	Octodon_degus
ENSSDUG00000013854	sub1b	65	71.296	ENSODEG00000014558	-	72	71.296	Octodon_degus
ENSSDUG00000013854	sub1b	76	77.778	ENSOANG00000002328	SUB1	95	76.190	Ornithorhynchus_anatinus
ENSSDUG00000013854	sub1b	76	70.866	ENSOCUG00000006262	SUB1	60	70.866	Oryctolagus_cuniculus
ENSSDUG00000013854	sub1b	74	74.194	ENSOGAG00000000337	-	100	74.194	Otolemur_garnettii
ENSSDUG00000013854	sub1b	76	73.228	ENSOGAG00000009012	-	100	73.228	Otolemur_garnettii
ENSSDUG00000013854	sub1b	76	73.228	ENSOARG00000012154	SUB1	100	73.228	Ovis_aries
ENSSDUG00000013854	sub1b	76	73.228	ENSPPAG00000011212	SUB1	100	73.228	Pan_paniscus
ENSSDUG00000013854	sub1b	76	72.441	ENSPPRG00000008557	SUB1	100	72.441	Panthera_pardus
ENSSDUG00000013854	sub1b	76	72.441	ENSPTIG00000009466	SUB1	100	72.441	Panthera_tigris_altaica
ENSSDUG00000013854	sub1b	76	67.717	ENSPTRG00000041644	-	100	68.504	Pan_troglodytes
ENSSDUG00000013854	sub1b	76	73.228	ENSPTRG00000048895	SUB1	100	73.228	Pan_troglodytes
ENSSDUG00000013854	sub1b	76	64.286	ENSPANG00000033272	-	92	60.465	Papio_anubis
ENSSDUG00000013854	sub1b	76	73.228	ENSPANG00000002644	-	95	73.228	Papio_anubis
ENSSDUG00000013854	sub1b	76	70.866	ENSPANG00000000672	-	91	70.866	Papio_anubis
ENSSDUG00000013854	sub1b	76	64.800	ENSPANG00000035601	-	100	69.841	Papio_anubis
ENSSDUG00000013854	sub1b	76	73.228	ENSPANG00000000339	-	97	73.228	Papio_anubis
ENSSDUG00000013854	sub1b	76	80.000	ENSPKIG00000016923	sub1b	100	80.000	Paramormyrops_kingsleyae
ENSSDUG00000013854	sub1b	76	76.984	ENSPSIG00000005731	SUB1	95	73.016	Pelodiscus_sinensis
ENSSDUG00000013854	sub1b	76	68.254	ENSPCIG00000020827	-	100	69.841	Phascolarctos_cinereus
ENSSDUG00000013854	sub1b	76	76.190	ENSPCIG00000020907	-	100	74.603	Phascolarctos_cinereus
ENSSDUG00000013854	sub1b	76	70.079	ENSPPYG00000018347	-	100	70.866	Pongo_abelii
ENSSDUG00000013854	sub1b	76	73.228	ENSPPYG00000015379	SUB1	100	73.228	Pongo_abelii
ENSSDUG00000013854	sub1b	76	73.228	ENSPCOG00000014391	SUB1	100	73.228	Propithecus_coquereli
ENSSDUG00000013854	sub1b	76	72.441	ENSPVAG00000004785	SUB1	100	72.441	Pteropus_vampyrus
ENSSDUG00000013854	sub1b	76	96.800	ENSPNYG00000010975	sub1b	100	96.800	Pundamilia_nyererei
ENSSDUG00000013854	sub1b	76	76.984	ENSPNAG00000008693	sub1a	100	77.778	Pygocentrus_nattereri
ENSSDUG00000013854	sub1b	76	83.871	ENSPNAG00000005998	sub1b	99	83.871	Pygocentrus_nattereri
ENSSDUG00000013854	sub1b	76	72.441	ENSRNOG00000050563	Sub1	100	72.441	Rattus_norvegicus
ENSSDUG00000013854	sub1b	76	64.286	ENSRBIG00000031233	SUB1	100	68.254	Rhinopithecus_bieti
ENSSDUG00000013854	sub1b	78	68.992	ENSRROG00000042718	-	93	67.442	Rhinopithecus_roxellana
ENSSDUG00000013854	sub1b	76	73.228	ENSRROG00000040438	SUB1	100	73.228	Rhinopithecus_roxellana
ENSSDUG00000013854	sub1b	76	73.228	ENSSBOG00000026994	SUB1	100	73.228	Saimiri_boliviensis_boliviensis
ENSSDUG00000013854	sub1b	80	73.684	ENSSHAG00000014986	SUB1	100	74.603	Sarcophilus_harrisii
ENSSDUG00000013854	sub1b	76	77.165	ENSSFOG00015018386	sub1b	100	83.465	Scleropages_formosus
ENSSDUG00000013854	sub1b	76	79.200	ENSSFOG00015017283	sub1b	100	79.200	Scleropages_formosus
ENSSDUG00000013854	sub1b	76	92.800	ENSSMAG00000000313	sub1b	100	92.800	Scophthalmus_maximus
ENSSDUG00000013854	sub1b	76	100.000	ENSSLDG00000000852	sub1b	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000013854	sub1b	76	76.984	ENSSPUG00000016817	SUB1	100	73.016	Sphenodon_punctatus
ENSSDUG00000013854	sub1b	76	96.000	ENSSPAG00000019363	sub1b	100	96.000	Stegastes_partitus
ENSSDUG00000013854	sub1b	76	73.228	ENSSSCG00000032650	-	100	73.228	Sus_scrofa
ENSSDUG00000013854	sub1b	76	73.228	ENSSSCG00000040294	-	87	73.228	Sus_scrofa
ENSSDUG00000013854	sub1b	76	76.984	ENSTGUG00000001918	SUB1	100	73.016	Taeniopygia_guttata
ENSSDUG00000013854	sub1b	76	90.400	ENSTRUG00000024420	sub1b	100	90.400	Takifugu_rubripes
ENSSDUG00000013854	sub1b	76	88.000	ENSTNIG00000002700	sub1b	100	88.000	Tetraodon_nigroviridis
ENSSDUG00000013854	sub1b	76	72.441	ENSTBEG00000004053	-	100	72.441	Tupaia_belangeri
ENSSDUG00000013854	sub1b	76	68.254	ENSTBEG00000015821	-	100	68.254	Tupaia_belangeri
ENSSDUG00000013854	sub1b	76	68.504	ENSTBEG00000001790	-	100	67.717	Tupaia_belangeri
ENSSDUG00000013854	sub1b	76	69.291	ENSTBEG00000012861	-	100	68.504	Tupaia_belangeri
ENSSDUG00000013854	sub1b	76	70.079	ENSTBEG00000011247	-	84	71.296	Tupaia_belangeri
ENSSDUG00000013854	sub1b	76	71.654	ENSTBEG00000006504	-	100	72.441	Tupaia_belangeri
ENSSDUG00000013854	sub1b	62	72.549	ENSTTRG00000017324	SUB1	99	74.510	Tursiops_truncatus
ENSSDUG00000013854	sub1b	76	72.441	ENSUAMG00000000182	SUB1	100	72.441	Ursus_americanus
ENSSDUG00000013854	sub1b	76	72.441	ENSUMAG00000013792	SUB1	100	72.441	Ursus_maritimus
ENSSDUG00000013854	sub1b	76	68.254	ENSVPAG00000011012	SUB1	100	66.667	Vicugna_pacos
ENSSDUG00000013854	sub1b	68	68.142	ENSVVUG00000025193	-	95	68.142	Vulpes_vulpes
ENSSDUG00000013854	sub1b	76	72.441	ENSVVUG00000022166	-	100	72.441	Vulpes_vulpes
ENSSDUG00000013854	sub1b	76	67.969	ENSXETG00000027218	sub1	100	71.875	Xenopus_tropicalis