EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013865 (Gene tree)
Gene ID: 111219724
Gene Symbol: srsf2a
Alias: -
Full Name: serine/arginine-rich splicing factor 2-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3445 bases
Position: chrBDQW01000068.1:5607160-5610604
Accession: 111219724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018998	RRM_1	PF00076.22	7.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019339	-	1934	XM_022742457	ENSSDUP00000018998	223 (aa)	XP_022598178	UPI000BBF090B

Gene Model

Click here to download ENSSDUG00000013865's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG
sdu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013865	srsf2a	100	94.348	ENSAPOG00000024396	srsf2a	100	94.348	Acanthochromis_polyacanthus
ENSSDUG00000013865	srsf2a	50	100.000	ENSAOCG00000021878	srsf2a	56	94.355	Amphiprion_ocellaris
ENSSDUG00000013865	srsf2a	50	100.000	ENSAPEG00000023494	srsf2a	56	94.355	Amphiprion_percula
ENSSDUG00000013865	srsf2a	100	96.507	ENSATEG00000004082	srsf2a	100	96.507	Anabas_testudineus
ENSSDUG00000013865	srsf2a	50	94.595	ENSACAG00000008553	-	51	93.750	Anolis_carolinensis
ENSSDUG00000013865	srsf2a	50	99.099	ENSACLG00000027016	srsf2a	55	93.496	Astatotilapia_calliptera
ENSSDUG00000013865	srsf2a	57	70.079	ENSCATG00000020182	-	63	54.878	Cercocebus_atys
ENSSDUG00000013865	srsf2a	100	61.947	ENSCHOG00000014019	-	53	91.667	Choloepus_hoffmanni
ENSSDUG00000013865	srsf2a	99	94.595	ENSCSEG00000013387	srsf2a	99	94.595	Cynoglossus_semilaevis
ENSSDUG00000013865	srsf2a	93	68.095	ENSDARG00000057484	srsf2a	95	97.321	Danio_rerio
ENSSDUG00000013865	srsf2a	85	51.579	ENSDNOG00000033905	-	58	60.360	Dasypus_novemcinctus
ENSSDUG00000013865	srsf2a	50	94.595	ENSGALG00000017357	SRSF2	51	93.750	Gallus_gallus
ENSSDUG00000013865	srsf2a	50	99.099	ENSHBUG00000013254	srsf2a	55	93.496	Haplochromis_burtoni
ENSSDUG00000013865	srsf2a	50	99.107	ENSKMAG00000009464	srsf2a	51	99.145	Kryptolebias_marmoratus
ENSSDUG00000013865	srsf2a	50	99.107	ENSLBEG00000027265	srsf2a	54	98.291	Labrus_bergylta
ENSSDUG00000013865	srsf2a	50	93.750	ENSLOCG00000011252	srsf2a	56	90.833	Lepisosteus_oculatus
ENSSDUG00000013865	srsf2a	50	99.099	ENSMZEG00005004205	srsf2a	55	93.496	Maylandia_zebra
ENSSDUG00000013865	srsf2a	51	85.088	ENSMZEG00005001748	-	50	86.607	Maylandia_zebra
ENSSDUG00000013865	srsf2a	50	99.107	ENSMMOG00000020751	srsf2a	56	95.833	Mola_mola
ENSSDUG00000013865	srsf2a	100	93.966	ENSMALG00000012956	srsf2a	100	93.966	Monopterus_albus
ENSSDUG00000013865	srsf2a	89	46.231	ENSMLUG00000026613	-	58	58.475	Myotis_lucifugus
ENSSDUG00000013865	srsf2a	65	61.446	ENSNLEG00000031658	-	65	56.818	Nomascus_leucogenys
ENSSDUG00000013865	srsf2a	54	70.079	ENSOCUG00000021840	-	51	74.336	Oryctolagus_cuniculus
ENSSDUG00000013865	srsf2a	79	63.277	ENSORLG00015007643	srsf2b	50	89.524	Oryzias_latipes_hsok
ENSSDUG00000013865	srsf2a	50	97.321	ENSOMEG00000007583	srsf2a	51	94.167	Oryzias_melastigma
ENSSDUG00000013865	srsf2a	50	93.694	ENSPKIG00000023128	-	52	90.000	Paramormyrops_kingsleyae
ENSSDUG00000013865	srsf2a	100	69.778	ENSPMGG00000010911	srsf2a	55	92.982	Periophthalmus_magnuspinnatus
ENSSDUG00000013865	srsf2a	64	64.626	ENSPPYG00000003786	-	52	68.966	Pongo_abelii
ENSSDUG00000013865	srsf2a	50	99.099	ENSPNYG00000001148	srsf2a	55	93.496	Pundamilia_nyererei
ENSSDUG00000013865	srsf2a	95	66.351	ENSSFOG00015003975	-	50	96.429	Scleropages_formosus
ENSSDUG00000013865	srsf2a	52	98.291	ENSSMAG00000005854	srsf2a	55	98.291	Scophthalmus_maximus
ENSSDUG00000013865	srsf2a	100	100.000	ENSSLDG00000017717	srsf2a	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000013865	srsf2a	50	91.892	ENSSPUG00000007582	-	50	94.340	Sphenodon_punctatus
ENSSDUG00000013865	srsf2a	50	99.107	ENSTRUG00000018104	srsf2a	54	93.548	Takifugu_rubripes
ENSSDUG00000013865	srsf2a	51	88.696	ENSTRUG00000024363	srsf2b	51	88.696	Takifugu_rubripes
ENSSDUG00000013865	srsf2a	50	99.107	ENSTNIG00000001280	srsf2a	55	93.548	Tetraodon_nigroviridis
ENSSDUG00000013865	srsf2a	50	94.595	ENSXETG00000025271	srsf2	50	94.595	Xenopus_tropicalis
ENSSDUG00000013865	srsf2a	50	100.000	ENSXCOG00000005917	srsf2a	55	96.667	Xiphophorus_couchianus