EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013882 (Gene tree)
Gene ID: 111222739
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 29768 bases
Position: chrBDQW01000008.1:82515-112282
Accession: 111222739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019058	DZF	PF07528.14	1.3e-71	1	1
ENSSDUP00000019091	DZF	PF07528.14	7.2e-55	1	1
ENSSDUP00000019091	zf-met	PF12874.7	2.1e-21	1	3
ENSSDUP00000019091	zf-met	PF12874.7	2.1e-21	2	3
ENSSDUP00000019091	zf-met	PF12874.7	2.1e-21	3	3
ENSSDUP00000019058	zf-met	PF12874.7	2.7e-21	1	3
ENSSDUP00000019058	zf-met	PF12874.7	2.7e-21	2	3
ENSSDUP00000019058	zf-met	PF12874.7	2.7e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019435	-	3012	-	ENSSDUP00000019091	1003 (aa)	-	-
ENSSDUT00000019399	-	5090	XM_022746575	ENSSDUP00000019058	1074 (aa)	XP_022602296	UPI000BBE5164

Gene Model

Click here to download ENSSDUG00000013882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013882	zfr	97	54.410	ENSSDUG00000000962	zfr2	99	49.382

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013882	zfr	100	77.585	ENSG00000056097	ZFR	100	76.944	Homo_sapiens
ENSSDUG00000013882	zfr	100	86.710	ENSAPOG00000009740	zfr	94	95.263	Acanthochromis_polyacanthus
ENSSDUG00000013882	zfr	100	77.482	ENSAMEG00000006184	ZFR	100	76.746	Ailuropoda_melanoleuca
ENSSDUG00000013882	zfr	100	89.672	ENSACIG00000015926	zfr	100	90.437	Amphilophus_citrinellus
ENSSDUG00000013882	zfr	100	90.158	ENSAOCG00000013876	zfr	100	90.436	Amphiprion_ocellaris
ENSSDUG00000013882	zfr	100	93.593	ENSAPEG00000024383	zfr	100	93.872	Amphiprion_percula
ENSSDUG00000013882	zfr	100	93.855	ENSATEG00000010271	zfr	100	93.948	Anabas_testudineus
ENSSDUG00000013882	zfr	78	72.459	ENSAPLG00000015627	-	100	72.695	Anas_platyrhynchos
ENSSDUG00000013882	zfr	100	75.708	ENSACAG00000007880	ZFR	100	75.229	Anolis_carolinensis
ENSSDUG00000013882	zfr	100	77.585	ENSANAG00000023333	ZFR	100	76.944	Aotus_nancymaae
ENSSDUG00000013882	zfr	100	89.474	ENSACLG00000016832	zfr	100	90.201	Astatotilapia_calliptera
ENSSDUG00000013882	zfr	98	86.747	ENSAMXG00000019511	zfr	100	85.728	Astyanax_mexicanus
ENSSDUG00000013882	zfr	100	77.298	ENSBTAG00000008414	ZFR	100	76.654	Bos_taurus
ENSSDUG00000013882	zfr	100	77.381	ENSCJAG00000018740	ZFR	100	76.740	Callithrix_jacchus
ENSSDUG00000013882	zfr	100	75.549	ENSCAFG00000018886	ZFR	99	76.358	Canis_familiaris
ENSSDUG00000013882	zfr	100	77.298	ENSCAFG00020016859	-	100	76.562	Canis_lupus_dingo
ENSSDUG00000013882	zfr	100	77.298	ENSCHIG00000007710	ZFR	100	76.654	Capra_hircus
ENSSDUG00000013882	zfr	97	76.543	ENSTSYG00000010670	ZFR	99	76.222	Carlito_syrichta
ENSSDUG00000013882	zfr	96	62.331	ENSCAPG00000015655	ZFR	100	59.730	Cavia_aperea
ENSSDUG00000013882	zfr	89	80.332	ENSCPOG00000000862	ZFR	100	70.182	Cavia_porcellus
ENSSDUG00000013882	zfr	100	77.585	ENSCCAG00000024473	ZFR	100	76.944	Cebus_capucinus
ENSSDUG00000013882	zfr	100	77.585	ENSCATG00000038311	ZFR	100	76.944	Cercocebus_atys
ENSSDUG00000013882	zfr	97	76.755	ENSCLAG00000007408	ZFR	100	76.341	Chinchilla_lanigera
ENSSDUG00000013882	zfr	100	77.585	ENSCSAG00000017180	ZFR	100	76.944	Chlorocebus_sabaeus
ENSSDUG00000013882	zfr	89	66.482	ENSCHOG00000003848	ZFR	94	66.482	Choloepus_hoffmanni
ENSSDUG00000013882	zfr	100	78.277	ENSCPBG00000024211	ZFR	100	78.277	Chrysemys_picta_bellii
ENSSDUG00000013882	zfr	100	77.493	ENSCANG00000017807	ZFR	100	76.853	Colobus_angolensis_palliatus
ENSSDUG00000013882	zfr	100	77.686	ENSCGRG00001016009	Zfr	100	76.937	Cricetulus_griseus_chok1gshd
ENSSDUG00000013882	zfr	98	76.504	ENSCGRG00000001228	Zfr	98	75.962	Cricetulus_griseus_crigri
ENSSDUG00000013882	zfr	97	87.879	ENSCSEG00000009224	zfr	100	86.224	Cynoglossus_semilaevis
ENSSDUG00000013882	zfr	99	87.001	ENSCSEG00000011169	ZFR	99	88.579	Cynoglossus_semilaevis
ENSSDUG00000013882	zfr	98	86.610	ENSCVAG00000016494	zfr	100	86.135	Cyprinodon_variegatus
ENSSDUG00000013882	zfr	98	86.826	ENSDARG00000027109	zfr	100	83.021	Danio_rerio
ENSSDUG00000013882	zfr	100	77.269	ENSDNOG00000008852	ZFR	100	76.994	Dasypus_novemcinctus
ENSSDUG00000013882	zfr	100	77.372	ENSDORG00000016643	Zfr	100	77.390	Dipodomys_ordii
ENSSDUG00000013882	zfr	100	72.411	ENSETEG00000008937	ZFR	100	72.294	Echinops_telfairi
ENSSDUG00000013882	zfr	53	56.522	ENSEBUG00000012503	-	96	59.818	Eptatretus_burgeri
ENSSDUG00000013882	zfr	100	77.502	ENSEASG00005007104	ZFR	100	76.562	Equus_asinus_asinus
ENSSDUG00000013882	zfr	82	75.615	ENSECAG00000012851	ZFR	99	74.468	Equus_caballus
ENSSDUG00000013882	zfr	94	68.513	ENSEEUG00000014206	ZFR	81	78.472	Erinaceus_europaeus
ENSSDUG00000013882	zfr	99	73.814	ENSELUG00000022743	zfr	99	73.266	Esox_lucius
ENSSDUG00000013882	zfr	100	77.390	ENSFCAG00000000354	ZFR	100	76.654	Felis_catus
ENSSDUG00000013882	zfr	100	77.521	ENSFALG00000002149	ZFR	100	77.798	Ficedula_albicollis
ENSSDUG00000013882	zfr	99	76.580	ENSFDAG00000012993	ZFR	100	75.929	Fukomys_damarensis
ENSSDUG00000013882	zfr	57	82.190	ENSFHEG00000012064	zfr	94	83.438	Fundulus_heteroclitus
ENSSDUG00000013882	zfr	95	93.243	ENSGMOG00000003967	zfr	93	91.935	Gadus_morhua
ENSSDUG00000013882	zfr	100	78.821	ENSGALG00000034488	-	100	77.676	Gallus_gallus
ENSSDUG00000013882	zfr	100	78.341	ENSGALG00000003235	-	100	78.433	Gallus_gallus
ENSSDUG00000013882	zfr	87	86.430	ENSGAFG00000016229	zfr	98	83.333	Gambusia_affinis
ENSSDUG00000013882	zfr	99	85.101	ENSGACG00000005045	zfr	100	85.417	Gasterosteus_aculeatus
ENSSDUG00000013882	zfr	95	77.907	ENSGAGG00000013544	ZFR	99	77.810	Gopherus_agassizii
ENSSDUG00000013882	zfr	100	77.676	ENSGGOG00000016302	ZFR	100	76.853	Gorilla_gorilla
ENSSDUG00000013882	zfr	100	77.043	ENSHGLG00000008088	ZFR	100	76.492	Heterocephalus_glaber_female
ENSSDUG00000013882	zfr	96	76.894	ENSHGLG00100016776	ZFR	99	76.127	Heterocephalus_glaber_male
ENSSDUG00000013882	zfr	100	85.438	ENSHCOG00000001548	zfr	100	86.175	Hippocampus_comes
ENSSDUG00000013882	zfr	100	88.421	ENSIPUG00000008192	zfr	100	83.257	Ictalurus_punctatus
ENSSDUG00000013882	zfr	100	77.583	ENSSTOG00000008742	ZFR	100	76.547	Ictidomys_tridecemlineatus
ENSSDUG00000013882	zfr	99	71.837	ENSJJAG00000023064	Zfr	98	72.071	Jaculus_jaculus
ENSSDUG00000013882	zfr	91	89.827	ENSKMAG00000009468	zfr	99	90.437	Kryptolebias_marmoratus
ENSSDUG00000013882	zfr	100	87.823	ENSLBEG00000010783	zfr	100	87.189	Labrus_bergylta
ENSSDUG00000013882	zfr	100	74.314	ENSLACG00000000831	ZFR	100	74.680	Latimeria_chalumnae
ENSSDUG00000013882	zfr	100	81.917	ENSLOCG00000006727	zfr	100	82.278	Lepisosteus_oculatus
ENSSDUG00000013882	zfr	98	77.081	ENSLAFG00000002308	ZFR	100	75.985	Loxodonta_africana
ENSSDUG00000013882	zfr	100	76.670	ENSMFAG00000042691	ZFR	100	76.029	Macaca_fascicularis
ENSSDUG00000013882	zfr	100	77.585	ENSMMUG00000001317	ZFR	100	76.944	Macaca_mulatta
ENSSDUG00000013882	zfr	100	77.585	ENSMNEG00000029441	ZFR	100	76.944	Macaca_nemestrina
ENSSDUG00000013882	zfr	100	75.321	ENSMLEG00000028503	ZFR	100	76.571	Mandrillus_leucophaeus
ENSSDUG00000013882	zfr	100	92.644	ENSMAMG00000017351	zfr	100	91.899	Mastacembelus_armatus
ENSSDUG00000013882	zfr	100	89.474	ENSMZEG00005021243	zfr	100	90.201	Maylandia_zebra
ENSSDUG00000013882	zfr	96	65.998	ENSMGAG00000002841	ZFR	86	71.523	Meleagris_gallopavo
ENSSDUG00000013882	zfr	100	77.778	ENSMAUG00000000976	Zfr	100	76.572	Mesocricetus_auratus
ENSSDUG00000013882	zfr	100	77.319	ENSMICG00000001244	ZFR	100	76.676	Microcebus_murinus
ENSSDUG00000013882	zfr	100	77.686	ENSMOCG00000018630	Zfr	100	76.846	Microtus_ochrogaster
ENSSDUG00000013882	zfr	100	84.137	ENSMMOG00000012585	zfr	100	84.893	Mola_mola
ENSSDUG00000013882	zfr	100	78.257	ENSMODG00000020412	ZFR	100	78.073	Monodelphis_domestica
ENSSDUG00000013882	zfr	95	93.243	ENSMALG00000007123	zfr	94	98.387	Monopterus_albus
ENSSDUG00000013882	zfr	100	77.227	MGP_CAROLIEiJ_G0019681	Zfr	100	79.530	Mus_caroli
ENSSDUG00000013882	zfr	100	77.410	ENSMUSG00000022201	Zfr	100	80.627	Mus_musculus
ENSSDUG00000013882	zfr	100	77.319	MGP_PahariEiJ_G0016057	Zfr	100	79.195	Mus_pahari
ENSSDUG00000013882	zfr	100	77.227	MGP_SPRETEiJ_G0020574	Zfr	100	79.195	Mus_spretus
ENSSDUG00000013882	zfr	73	75.031	ENSMPUG00000015193	-	99	73.750	Mustela_putorius_furo
ENSSDUG00000013882	zfr	97	77.216	ENSMLUG00000011797	ZFR	99	76.577	Myotis_lucifugus
ENSSDUG00000013882	zfr	100	77.594	ENSNGAG00000018328	Zfr	100	76.860	Nannospalax_galili
ENSSDUG00000013882	zfr	100	89.044	ENSNBRG00000008378	zfr	100	87.649	Neolamprologus_brichardi
ENSSDUG00000013882	zfr	100	75.115	ENSNLEG00000014098	ZFR	100	76.571	Nomascus_leucogenys
ENSSDUG00000013882	zfr	96	72.919	ENSMEUG00000010225	ZFR	100	72.536	Notamacropus_eugenii
ENSSDUG00000013882	zfr	83	84.400	ENSOPRG00000016756	ZFR	84	84.064	Ochotona_princeps
ENSSDUG00000013882	zfr	96	76.894	ENSODEG00000001990	ZFR	100	76.606	Octodon_degus
ENSSDUG00000013882	zfr	80	83.149	ENSONIG00000013960	zfr	74	87.560	Oreochromis_niloticus
ENSSDUG00000013882	zfr	96	77.682	ENSOANG00000014434	ZFR	99	78.107	Ornithorhynchus_anatinus
ENSSDUG00000013882	zfr	100	77.594	ENSOCUG00000016737	ZFR	100	76.951	Oryctolagus_cuniculus
ENSSDUG00000013882	zfr	99	87.268	ENSORLG00000017243	zfr	99	86.989	Oryzias_latipes
ENSSDUG00000013882	zfr	99	87.361	ENSORLG00020014823	zfr	99	87.082	Oryzias_latipes_hni
ENSSDUG00000013882	zfr	99	87.268	ENSORLG00015005801	zfr	99	86.989	Oryzias_latipes_hsok
ENSSDUG00000013882	zfr	99	88.011	ENSOMEG00000003336	zfr	99	87.918	Oryzias_melastigma
ENSSDUG00000013882	zfr	100	75.505	ENSOGAG00000015117	ZFR	100	74.679	Otolemur_garnettii
ENSSDUG00000013882	zfr	97	75.694	ENSOARG00000012233	ZFR	100	75.000	Ovis_aries
ENSSDUG00000013882	zfr	97	76.727	ENSPPAG00000027447	ZFR	99	76.358	Pan_paniscus
ENSSDUG00000013882	zfr	100	77.482	ENSPPRG00000008253	ZFR	100	76.746	Panthera_pardus
ENSSDUG00000013882	zfr	100	75.115	ENSPTIG00000010038	ZFR	99	74.378	Panthera_tigris_altaica
ENSSDUG00000013882	zfr	100	77.585	ENSPTRG00000016771	ZFR	100	76.944	Pan_troglodytes
ENSSDUG00000013882	zfr	100	76.449	ENSPANG00000003729	ZFR	100	75.713	Papio_anubis
ENSSDUG00000013882	zfr	100	73.622	ENSPKIG00000007596	ZFR	100	73.713	Paramormyrops_kingsleyae
ENSSDUG00000013882	zfr	100	88.298	ENSPKIG00000016781	ZFR	100	81.014	Paramormyrops_kingsleyae
ENSSDUG00000013882	zfr	50	84.815	ENSPSIG00000005779	ZFR	98	83.912	Pelodiscus_sinensis
ENSSDUG00000013882	zfr	94	85.433	ENSPMGG00000015984	zfr	100	85.039	Periophthalmus_magnuspinnatus
ENSSDUG00000013882	zfr	96	76.072	ENSPEMG00000014573	Zfr	98	75.307	Peromyscus_maniculatus_bairdii
ENSSDUG00000013882	zfr	100	78.257	ENSPCIG00000020906	ZFR	100	78.073	Phascolarctos_cinereus
ENSSDUG00000013882	zfr	99	87.825	ENSPFOG00000005931	zfr	100	87.918	Poecilia_formosa
ENSSDUG00000013882	zfr	99	87.244	ENSPREG00000011947	zfr	100	88.082	Poecilia_reticulata
ENSSDUG00000013882	zfr	97	76.952	ENSPPYG00000015378	ZFR	99	76.190	Pongo_abelii
ENSSDUG00000013882	zfr	100	69.789	ENSPCAG00000007277	ZFR	100	69.789	Procavia_capensis
ENSSDUG00000013882	zfr	95	76.886	ENSPCOG00000000045	ZFR	99	76.112	Propithecus_coquereli
ENSSDUG00000013882	zfr	94	83.133	ENSPVAG00000004780	ZFR	94	83.133	Pteropus_vampyrus
ENSSDUG00000013882	zfr	100	89.573	ENSPNYG00000006239	zfr	100	90.319	Pundamilia_nyererei
ENSSDUG00000013882	zfr	100	85.281	ENSPNAG00000025151	zfr	100	86.109	Pygocentrus_nattereri
ENSSDUG00000013882	zfr	100	77.227	ENSRNOG00000011627	Zfr	100	83.721	Rattus_norvegicus
ENSSDUG00000013882	zfr	100	77.493	ENSRBIG00000041561	ZFR	100	76.853	Rhinopithecus_bieti
ENSSDUG00000013882	zfr	100	77.493	ENSRROG00000044008	ZFR	100	76.853	Rhinopithecus_roxellana
ENSSDUG00000013882	zfr	96	77.268	ENSSBOG00000024150	ZFR	99	76.504	Saimiri_boliviensis_boliviensis
ENSSDUG00000013882	zfr	96	78.107	ENSSHAG00000015478	ZFR	100	77.820	Sarcophilus_harrisii
ENSSDUG00000013882	zfr	100	76.514	ENSSFOG00015017300	ZFR	100	76.147	Scleropages_formosus
ENSSDUG00000013882	zfr	100	91.076	ENSSMAG00000000320	zfr	100	91.536	Scophthalmus_maximus
ENSSDUG00000013882	zfr	100	99.271	ENSSLDG00000000762	zfr	100	96.123	Seriola_lalandi_dorsalis
ENSSDUG00000013882	zfr	90	85.650	ENSSARG00000006571	ZFR	93	85.650	Sorex_araneus
ENSSDUG00000013882	zfr	96	77.639	ENSSPUG00000016786	ZFR	100	76.784	Sphenodon_punctatus
ENSSDUG00000013882	zfr	100	94.331	ENSSPAG00000019293	zfr	100	94.888	Stegastes_partitus
ENSSDUG00000013882	zfr	100	77.594	ENSSSCG00000027681	ZFR	100	76.746	Sus_scrofa
ENSSDUG00000013882	zfr	99	77.613	ENSTGUG00000001909	ZFR	100	77.613	Taeniopygia_guttata
ENSSDUG00000013882	zfr	100	89.229	ENSTRUG00000016620	zfr	100	89.508	Takifugu_rubripes
ENSSDUG00000013882	zfr	56	82.392	ENSTNIG00000018856	zfr	99	81.561	Tetraodon_nigroviridis
ENSSDUG00000013882	zfr	94	76.064	ENSTBEG00000017687	ZFR	93	68.617	Tupaia_belangeri
ENSSDUG00000013882	zfr	100	73.186	ENSTTRG00000017321	ZFR	100	72.243	Tursiops_truncatus
ENSSDUG00000013882	zfr	78	74.971	ENSUAMG00000000172	-	99	73.647	Ursus_americanus
ENSSDUG00000013882	zfr	78	74.971	ENSUMAG00000013805	-	99	73.647	Ursus_maritimus
ENSSDUG00000013882	zfr	100	75.298	ENSVPAG00000011011	ZFR	100	74.265	Vicugna_pacos
ENSSDUG00000013882	zfr	100	77.390	ENSVVUG00000022171	-	100	76.654	Vulpes_vulpes
ENSSDUG00000013882	zfr	100	72.458	ENSXETG00000015598	zfr	100	72.181	Xenopus_tropicalis
ENSSDUG00000013882	zfr	99	87.918	ENSXCOG00000009361	zfr	100	87.454	Xiphophorus_couchianus
ENSSDUG00000013882	zfr	99	88.011	ENSXMAG00000013356	zfr	100	87.546	Xiphophorus_maculatus