EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013908 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1a
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5968 bases
Position: chrBDQW01000056.1:6837701-6843668
Accession: ZDB-GENE-040426-1546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019359	RRM_1	PF00076.22	6.3e-37	1	2
ENSSDUP00000019359	RRM_1	PF00076.22	6.3e-37	2	2
ENSSDUP00000019471	RRM_1	PF00076.22	9.2e-37	1	2
ENSSDUP00000019471	RRM_1	PF00076.22	9.2e-37	2	2
ENSSDUP00000019486	RRM_1	PF00076.22	9.5e-37	1	2
ENSSDUP00000019486	RRM_1	PF00076.22	9.5e-37	2	2
ENSSDUP00000019449	RRM_1	PF00076.22	1e-36	1	2
ENSSDUP00000019449	RRM_1	PF00076.22	1e-36	2	2
ENSSDUP00000019396	RRM_1	PF00076.22	1.5e-36	1	2
ENSSDUP00000019396	RRM_1	PF00076.22	1.5e-36	2	2
ENSSDUP00000019523	RRM_1	PF00076.22	1.8e-36	1	2
ENSSDUP00000019523	RRM_1	PF00076.22	1.8e-36	2	2
ENSSDUP00000019552	RRM_1	PF00076.22	6.1e-36	1	2
ENSSDUP00000019552	RRM_1	PF00076.22	6.1e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019796	-	750	-	ENSSDUP00000019449	249 (aa)	-	-
ENSSDUT00000019818	-	732	-	ENSSDUP00000019471	243 (aa)	-	-
ENSSDUT00000019743	-	849	-	ENSSDUP00000019396	282 (aa)	-	-
ENSSDUT00000019870	-	894	-	ENSSDUP00000019523	297 (aa)	-	-
ENSSDUT00000019898	-	813	-	ENSSDUP00000019552	270 (aa)	-	-
ENSSDUT00000019833	-	726	-	ENSSDUP00000019486	241 (aa)	-	-
ENSSDUT00000019706	-	648	-	ENSSDUP00000019359	215 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000013908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013908	hnrnpa1a	82	55.215	ENSSDUG00000002394	-	89	54.545
ENSSDUG00000013908	hnrnpa1a	89	41.135	ENSSDUG00000021968	-	91	46.552
ENSSDUG00000013908	hnrnpa1a	90	78.866	ENSSDUG00000000381	hnrnpa3	75	69.658
ENSSDUG00000013908	hnrnpa1a	88	39.437	ENSSDUG00000010792	hnrnpd	73	40.462
ENSSDUG00000013908	hnrnpa1a	80	35.714	ENSSDUG00000006852	tardbpl	81	34.667
ENSSDUG00000013908	hnrnpa1a	97	37.674	ENSSDUG00000001027	MSI1	52	42.073
ENSSDUG00000013908	hnrnpa1a	80	38.824	ENSSDUG00000009050	-	68	34.685
ENSSDUG00000013908	hnrnpa1a	81	58.960	ENSSDUG00000002431	-	88	56.216
ENSSDUG00000013908	hnrnpa1a	85	40.341	ENSSDUG00000014507	msi2a	69	46.552
ENSSDUG00000013908	hnrnpa1a	81	36.416	ENSSDUG00000004787	hnrnpaba	66	34.071
ENSSDUG00000013908	hnrnpa1a	85	40.909	ENSSDUG00000022697	-	53	40.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013908	hnrnpa1a	93	88.106	ENSAPOG00000019369	-	89	96.842	Acanthochromis_polyacanthus
ENSSDUG00000013908	hnrnpa1a	84	55.249	ENSACIG00000021815	-	91	55.376	Amphilophus_citrinellus
ENSSDUG00000013908	hnrnpa1a	93	88.106	ENSAOCG00000005289	-	89	96.842	Amphiprion_ocellaris
ENSSDUG00000013908	hnrnpa1a	93	88.106	ENSAPEG00000004179	-	89	96.842	Amphiprion_percula
ENSSDUG00000013908	hnrnpa1a	86	98.370	ENSATEG00000022918	hnrnpa1a	93	95.455	Anabas_testudineus
ENSSDUG00000013908	hnrnpa1a	82	59.006	ENSATEG00000003423	-	76	59.006	Anabas_testudineus
ENSSDUG00000013908	hnrnpa1a	83	55.618	ENSACAG00000017109	-	77	49.603	Anolis_carolinensis
ENSSDUG00000013908	hnrnpa1a	92	88.288	ENSACLG00000006940	-	89	97.872	Astatotilapia_calliptera
ENSSDUG00000013908	hnrnpa1a	84	85.556	ENSAMXG00000006296	hnrnpa1a	67	68.651	Astyanax_mexicanus
ENSSDUG00000013908	hnrnpa1a	82	63.842	ENSAMXG00000037730	-	85	51.034	Astyanax_mexicanus
ENSSDUG00000013908	hnrnpa1a	90	88.660	ENSCSEG00000007589	hnrnpa1a	89	89.691	Cynoglossus_semilaevis
ENSSDUG00000013908	hnrnpa1a	82	54.545	ENSCSEG00000014051	-	73	53.672	Cynoglossus_semilaevis
ENSSDUG00000013908	hnrnpa1a	95	86.087	ENSCVAG00000012637	hnrnpa1a	89	96.842	Cyprinodon_variegatus
ENSSDUG00000013908	hnrnpa1a	84	82.222	ENSDARG00000011020	hnrnpa1a	87	72.646	Danio_rerio
ENSSDUG00000013908	hnrnpa1a	90	54.922	ENSDORG00000026425	-	71	49.600	Dipodomys_ordii
ENSSDUG00000013908	hnrnpa1a	86	91.304	ENSELUG00000007372	-	92	75.820	Esox_lucius
ENSSDUG00000013908	hnrnpa1a	84	61.667	ENSGMOG00000020353	-	97	61.497	Gadus_morhua
ENSSDUG00000013908	hnrnpa1a	84	87.222	ENSGMOG00000017950	hnrnpa1a	50	87.027	Gadus_morhua
ENSSDUG00000013908	hnrnpa1a	84	54.444	ENSGAFG00000016803	-	56	54.301	Gambusia_affinis
ENSSDUG00000013908	hnrnpa1a	95	86.697	ENSGAFG00000007751	-	89	97.895	Gambusia_affinis
ENSSDUG00000013908	hnrnpa1a	83	94.944	ENSGACG00000009435	-	87	93.421	Gasterosteus_aculeatus
ENSSDUG00000013908	hnrnpa1a	92	88.288	ENSHBUG00000005647	hnrnpa1a	89	97.872	Haplochromis_burtoni
ENSSDUG00000013908	hnrnpa1a	84	61.878	ENSIPUG00000001991	-	80	61.702	Ictalurus_punctatus
ENSSDUG00000013908	hnrnpa1a	87	83.511	ENSIPUG00000002023	hnrnpa1a	85	87.500	Ictalurus_punctatus
ENSSDUG00000013908	hnrnpa1a	86	84.783	ENSIPUG00000022440	-	86	74.500	Ictalurus_punctatus
ENSSDUG00000013908	hnrnpa1a	93	88.444	ENSKMAG00000020859	-	88	97.368	Kryptolebias_marmoratus
ENSSDUG00000013908	hnrnpa1a	96	86.266	ENSLBEG00000010010	hnrnpa1a	89	81.435	Labrus_bergylta
ENSSDUG00000013908	hnrnpa1a	83	71.111	ENSMFAG00000028351	-	57	70.769	Macaca_fascicularis
ENSSDUG00000013908	hnrnpa1a	98	83.696	ENSMAMG00000007606	-	90	98.953	Mastacembelus_armatus
ENSSDUG00000013908	hnrnpa1a	92	88.288	ENSMZEG00005027173	hnrnpa1a	89	97.872	Maylandia_zebra
ENSSDUG00000013908	hnrnpa1a	99	94.142	ENSMMOG00000008251	hnrnpa1a	99	94.142	Mola_mola
ENSSDUG00000013908	hnrnpa1a	93	89.333	ENSMALG00000014091	hnrnpa1a	89	98.429	Monopterus_albus
ENSSDUG00000013908	hnrnpa1a	84	56.111	ENSMALG00000008886	-	89	55.978	Monopterus_albus
ENSSDUG00000013908	hnrnpa1a	85	58.791	ENSNBRG00000014469	-	85	58.791	Neolamprologus_brichardi
ENSSDUG00000013908	hnrnpa1a	92	88.288	ENSNBRG00000018441	-	89	97.872	Neolamprologus_brichardi
ENSSDUG00000013908	hnrnpa1a	85	100.000	ENSORLG00000008001	-	90	96.373	Oryzias_latipes
ENSSDUG00000013908	hnrnpa1a	97	48.077	ENSORLG00000029240	-	95	51.667	Oryzias_latipes
ENSSDUG00000013908	hnrnpa1a	98	48.872	ENSORLG00020022498	-	89	51.429	Oryzias_latipes_hni
ENSSDUG00000013908	hnrnpa1a	85	100.000	ENSORLG00020006582	hnrnpa1a	90	96.373	Oryzias_latipes_hni
ENSSDUG00000013908	hnrnpa1a	95	39.676	ENSORLG00020006043	-	61	48.619	Oryzias_latipes_hni
ENSSDUG00000013908	hnrnpa1a	85	100.000	ENSORLG00015022294	-	90	96.891	Oryzias_latipes_hsok
ENSSDUG00000013908	hnrnpa1a	91	100.000	ENSOMEG00000015959	-	90	96.891	Oryzias_melastigma
ENSSDUG00000013908	hnrnpa1a	85	92.308	ENSPMGG00000011804	hnrnpa1a	91	79.182	Periophthalmus_magnuspinnatus
ENSSDUG00000013908	hnrnpa1a	85	56.593	ENSPMGG00000016392	-	94	56.906	Periophthalmus_magnuspinnatus
ENSSDUG00000013908	hnrnpa1a	98	82.909	ENSPFOG00000001825	-	89	98.742	Poecilia_formosa
ENSSDUG00000013908	hnrnpa1a	98	82.909	ENSPMEG00000002425	-	89	98.742	Poecilia_mexicana
ENSSDUG00000013908	hnrnpa1a	85	58.791	ENSPNYG00000020729	-	93	58.791	Pundamilia_nyererei
ENSSDUG00000013908	hnrnpa1a	85	83.060	ENSPNAG00000007752	hnrnpa1a	97	70.661	Pygocentrus_nattereri
ENSSDUG00000013908	hnrnpa1a	86	84.239	ENSPNAG00000021630	-	57	86.441	Pygocentrus_nattereri
ENSSDUG00000013908	hnrnpa1a	83	93.820	ENSSMAG00000004641	hnrnpa1a	89	95.597	Scophthalmus_maximus
ENSSDUG00000013908	hnrnpa1a	82	58.929	ENSSMAG00000010279	-	94	58.929	Scophthalmus_maximus
ENSSDUG00000013908	hnrnpa1a	94	51.185	ENSSMAG00000010246	-	88	52.792	Scophthalmus_maximus
ENSSDUG00000013908	hnrnpa1a	99	99.580	ENSSLDG00000003718	hnrnpa1a	98	99.580	Seriola_lalandi_dorsalis
ENSSDUG00000013908	hnrnpa1a	96	88.462	ENSSPAG00000018518	-	89	96.316	Stegastes_partitus
ENSSDUG00000013908	hnrnpa1a	88	89.583	ENSTRUG00000020491	-	90	92.188	Takifugu_rubripes
ENSSDUG00000013908	hnrnpa1a	86	60.326	ENSTNIG00000007398	-	80	60.335	Tetraodon_nigroviridis
ENSSDUG00000013908	hnrnpa1a	96	88.739	ENSXCOG00000009001	-	84	97.949	Xiphophorus_couchianus
ENSSDUG00000013908	hnrnpa1a	98	83.273	ENSXMAG00000008076	-	89	99.371	Xiphophorus_maculatus