EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013920 (Gene tree)
Gene ID: 111233391
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6359 bases
Position: chrBDQW01000391.1:897158-903516
Accession: 111233391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019132	SRP54	PF00448.22	1.5e-47	1	1
ENSSDUP00000019097	SRP54	PF00448.22	2.5e-47	1	1
ENSSDUP00000019132	SRP54_N	PF02881.19	2e-10	1	1
ENSSDUP00000019097	SRP54_N	PF02881.19	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019477	-	1758	-	ENSSDUP00000019132	585 (aa)	-	-
ENSSDUT00000019441	-	2470	XM_022761181	ENSSDUP00000019097	704 (aa)	XP_022616902	-

Gene Model

Click here to download ENSSDUG00000013920's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013920	srpra	100	67.031	ENSG00000182934	SRPRA	100	67.031	Homo_sapiens
ENSSDUG00000013920	srpra	92	91.871	ENSAPOG00000017588	srpra	100	91.871	Acanthochromis_polyacanthus
ENSSDUG00000013920	srpra	100	66.615	ENSAMEG00000000117	SRPRA	100	66.303	Ailuropoda_melanoleuca
ENSSDUG00000013920	srpra	100	78.241	ENSACIG00000021588	srpra	100	86.790	Amphilophus_citrinellus
ENSSDUG00000013920	srpra	100	87.960	ENSAOCG00000018884	srpra	100	91.564	Amphiprion_ocellaris
ENSSDUG00000013920	srpra	100	87.960	ENSAPEG00000022286	srpra	100	88.963	Amphiprion_percula
ENSSDUG00000013920	srpra	100	82.867	ENSATEG00000023578	srpra	95	97.264	Anabas_testudineus
ENSSDUG00000013920	srpra	93	66.069	ENSAPLG00000016079	SRPRA	99	68.823	Anas_platyrhynchos
ENSSDUG00000013920	srpra	100	67.388	ENSACAG00000000108	SRPRA	100	69.665	Anolis_carolinensis
ENSSDUG00000013920	srpra	100	66.875	ENSANAG00000020346	SRPRA	100	66.875	Aotus_nancymaae
ENSSDUG00000013920	srpra	92	87.711	ENSACLG00000000518	srpra	100	87.404	Astatotilapia_calliptera
ENSSDUG00000013920	srpra	100	74.634	ENSAMXG00000009975	srpra	100	74.309	Astyanax_mexicanus
ENSSDUG00000013920	srpra	100	66.355	ENSBTAG00000014105	SRPRA	100	67.395	Bos_taurus
ENSSDUG00000013920	srpra	99	48.499	WBGene00009521	F38A1.8	99	48.025	Caenorhabditis_elegans
ENSSDUG00000013920	srpra	100	66.667	ENSCJAG00000008752	SRPRA	100	66.717	Callithrix_jacchus
ENSSDUG00000013920	srpra	100	64.688	ENSCAFG00000010474	SRPRA	100	65.000	Canis_familiaris
ENSSDUG00000013920	srpra	100	66.406	ENSCAFG00020010608	SRPRA	100	66.719	Canis_lupus_dingo
ENSSDUG00000013920	srpra	100	67.239	ENSCHIG00000012423	SRPRA	100	67.083	Capra_hircus
ENSSDUG00000013920	srpra	100	70.256	ENSTSYG00000005187	SRPRA	90	86.984	Carlito_syrichta
ENSSDUG00000013920	srpra	94	68.858	ENSCAPG00000007098	SRPRA	91	87.970	Cavia_aperea
ENSSDUG00000013920	srpra	100	66.250	ENSCPOG00000014976	SRPRA	91	87.970	Cavia_porcellus
ENSSDUG00000013920	srpra	100	66.406	ENSCCAG00000025602	SRPRA	100	66.717	Cebus_capucinus
ENSSDUG00000013920	srpra	100	66.875	ENSCATG00000039354	SRPRA	100	67.188	Cercocebus_atys
ENSSDUG00000013920	srpra	100	66.823	ENSCLAG00000016839	SRPRA	100	65.938	Chinchilla_lanigera
ENSSDUG00000013920	srpra	100	67.031	ENSCSAG00000002271	SRPRA	100	67.031	Chlorocebus_sabaeus
ENSSDUG00000013920	srpra	53	87.245	ENSCHOG00000010015	-	73	87.245	Choloepus_hoffmanni
ENSSDUG00000013920	srpra	100	66.974	ENSCPBG00000011128	SRPRA	100	69.219	Chrysemys_picta_bellii
ENSSDUG00000013920	srpra	99	57.143	ENSCING00000008954	-	100	57.594	Ciona_intestinalis
ENSSDUG00000013920	srpra	99	59.011	ENSCSAVG00000005602	-	100	58.946	Ciona_savignyi
ENSSDUG00000013920	srpra	100	66.719	ENSCANG00000032337	SRPRA	100	67.031	Colobus_angolensis_palliatus
ENSSDUG00000013920	srpra	100	66.928	ENSCGRG00001017670	Srpr	100	67.293	Cricetulus_griseus_chok1gshd
ENSSDUG00000013920	srpra	100	66.928	ENSCGRG00000009892	Srpr	90	88.148	Cricetulus_griseus_crigri
ENSSDUG00000013920	srpra	100	85.526	ENSCSEG00000002374	srpra	100	88.685	Cynoglossus_semilaevis
ENSSDUG00000013920	srpra	92	85.933	ENSCVAG00000019881	srpra	100	86.544	Cyprinodon_variegatus
ENSSDUG00000013920	srpra	100	73.692	ENSDARG00000061124	srpra	100	77.508	Danio_rerio
ENSSDUG00000013920	srpra	100	66.410	ENSDNOG00000010821	SRPRA	100	65.414	Dasypus_novemcinctus
ENSSDUG00000013920	srpra	100	66.823	ENSDORG00000016719	Srpr	100	66.562	Dipodomys_ordii
ENSSDUG00000013920	srpra	99	52.139	FBgn0010391	Gtp-bp	100	52.584	Drosophila_melanogaster
ENSSDUG00000013920	srpra	100	65.941	ENSETEG00000013956	SRPRA	100	66.199	Echinops_telfairi
ENSSDUG00000013920	srpra	55	84.259	ENSEBUG00000002602	srpra	92	72.864	Eptatretus_burgeri
ENSSDUG00000013920	srpra	100	67.344	ENSEASG00005022980	SRPRA	100	67.344	Equus_asinus_asinus
ENSSDUG00000013920	srpra	100	67.344	ENSECAG00000014692	SRPRA	100	67.344	Equus_caballus
ENSSDUG00000013920	srpra	100	61.838	ENSEEUG00000007920	SRPRA	100	62.461	Erinaceus_europaeus
ENSSDUG00000013920	srpra	92	83.969	ENSELUG00000017643	srpra	100	84.686	Esox_lucius
ENSSDUG00000013920	srpra	78	60.624	ENSFCAG00000030894	-	99	60.829	Felis_catus
ENSSDUG00000013920	srpra	100	66.927	ENSFCAG00000011274	-	100	66.920	Felis_catus
ENSSDUG00000013920	srpra	99	64.961	ENSFALG00000005048	SRPRA	99	66.921	Ficedula_albicollis
ENSSDUG00000013920	srpra	100	66.510	ENSFDAG00000016229	SRPRA	92	83.217	Fukomys_damarensis
ENSSDUG00000013920	srpra	92	88.344	ENSFHEG00000016959	srpra	100	88.497	Fundulus_heteroclitus
ENSSDUG00000013920	srpra	100	78.880	ENSGMOG00000013244	srpra	100	81.930	Gadus_morhua
ENSSDUG00000013920	srpra	100	67.907	ENSGALG00000030759	SRPRA	100	69.335	Gallus_gallus
ENSSDUG00000013920	srpra	100	85.738	ENSGAFG00000000453	srpra	100	88.786	Gambusia_affinis
ENSSDUG00000013920	srpra	100	78.882	ENSGACG00000006550	srpra	100	84.427	Gasterosteus_aculeatus
ENSSDUG00000013920	srpra	100	66.974	ENSGAGG00000021157	SRPRA	100	69.219	Gopherus_agassizii
ENSSDUG00000013920	srpra	100	66.719	ENSGGOG00000012962	SRPRA	100	66.869	Gorilla_gorilla
ENSSDUG00000013920	srpra	92	87.558	ENSHBUG00000000119	srpra	100	87.250	Haplochromis_burtoni
ENSSDUG00000013920	srpra	100	66.510	ENSHGLG00000001597	SRPR	94	88.636	Heterocephalus_glaber_female
ENSSDUG00000013920	srpra	100	66.510	ENSHGLG00100006449	SRPR	94	88.636	Heterocephalus_glaber_male
ENSSDUG00000013920	srpra	100	85.142	ENSHCOG00000010749	srpra	100	85.142	Hippocampus_comes
ENSSDUG00000013920	srpra	93	70.358	ENSIPUG00000000867	srpra	99	75.285	Ictalurus_punctatus
ENSSDUG00000013920	srpra	100	66.562	ENSSTOG00000009897	SRPRA	100	66.869	Ictidomys_tridecemlineatus
ENSSDUG00000013920	srpra	100	66.667	ENSJJAG00000020272	Srpr	100	67.031	Jaculus_jaculus
ENSSDUG00000013920	srpra	92	87.749	ENSKMAG00000002280	srpra	100	88.208	Kryptolebias_marmoratus
ENSSDUG00000013920	srpra	92	90.337	ENSLBEG00000009608	srpra	100	90.491	Labrus_bergylta
ENSSDUG00000013920	srpra	93	75.728	ENSLACG00000017781	SRPRA	100	71.021	Latimeria_chalumnae
ENSSDUG00000013920	srpra	100	72.289	ENSLOCG00000002733	srpra	100	76.248	Lepisosteus_oculatus
ENSSDUG00000013920	srpra	100	64.165	ENSLAFG00000010252	SRPRA	100	66.615	Loxodonta_africana
ENSSDUG00000013920	srpra	100	67.188	ENSMFAG00000032606	SRPRA	100	67.188	Macaca_fascicularis
ENSSDUG00000013920	srpra	100	67.188	ENSMMUG00000007938	SRPRA	100	67.188	Macaca_mulatta
ENSSDUG00000013920	srpra	100	67.188	ENSMNEG00000030709	SRPRA	100	67.188	Macaca_nemestrina
ENSSDUG00000013920	srpra	100	66.875	ENSMLEG00000043404	SRPRA	100	67.188	Mandrillus_leucophaeus
ENSSDUG00000013920	srpra	92	88.018	ENSMAMG00000000473	srpra	100	88.633	Mastacembelus_armatus
ENSSDUG00000013920	srpra	92	87.711	ENSMZEG00005013432	srpra	100	87.404	Maylandia_zebra
ENSSDUG00000013920	srpra	93	64.706	ENSMGAG00000000732	SRPRA	100	68.994	Meleagris_gallopavo
ENSSDUG00000013920	srpra	100	66.928	ENSMAUG00000015648	Srpr	100	67.293	Mesocricetus_auratus
ENSSDUG00000013920	srpra	100	66.406	ENSMICG00000015981	SRPRA	100	66.768	Microcebus_murinus
ENSSDUG00000013920	srpra	100	66.719	ENSMOCG00000008311	Srpr	100	67.136	Microtus_ochrogaster
ENSSDUG00000013920	srpra	100	85.323	ENSMMOG00000005019	srpra	100	85.484	Mola_mola
ENSSDUG00000013920	srpra	100	66.667	ENSMODG00000004576	-	100	66.981	Monodelphis_domestica
ENSSDUG00000013920	srpra	92	91.705	ENSMALG00000011343	srpra	100	91.705	Monopterus_albus
ENSSDUG00000013920	srpra	100	66.458	MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	Mus_caroli
ENSSDUG00000013920	srpra	100	67.606	ENSMUSG00000032042	Srpr	86	88.636	Mus_musculus
ENSSDUG00000013920	srpra	100	67.085	MGP_PahariEiJ_G0014816	Srpr	86	88.636	Mus_pahari
ENSSDUG00000013920	srpra	93	75.123	MGP_SPRETEiJ_G0033075	Srpr	100	63.439	Mus_spretus
ENSSDUG00000013920	srpra	100	66.978	ENSMPUG00000006626	SRPRA	100	66.511	Mustela_putorius_furo
ENSSDUG00000013920	srpra	100	67.085	ENSMLUG00000017334	SRPRA	100	67.555	Myotis_lucifugus
ENSSDUG00000013920	srpra	100	66.510	ENSNGAG00000015686	Srpr	100	66.875	Nannospalax_galili
ENSSDUG00000013920	srpra	92	88.018	ENSNBRG00000017311	srpra	100	87.711	Neolamprologus_brichardi
ENSSDUG00000013920	srpra	99	63.307	ENSNLEG00000007467	SRPRA	100	66.188	Nomascus_leucogenys
ENSSDUG00000013920	srpra	93	65.833	ENSMEUG00000004956	SRPRA	100	65.391	Notamacropus_eugenii
ENSSDUG00000013920	srpra	100	63.594	ENSOPRG00000013160	SRPRA	100	63.438	Ochotona_princeps
ENSSDUG00000013920	srpra	100	66.771	ENSODEG00000004730	SRPRA	100	66.771	Octodon_degus
ENSSDUG00000013920	srpra	92	87.558	ENSONIG00000005324	srpra	100	87.250	Oreochromis_niloticus
ENSSDUG00000013920	srpra	100	66.980	ENSOCUG00000017057	SRPRA	100	66.980	Oryctolagus_cuniculus
ENSSDUG00000013920	srpra	100	78.019	ENSORLG00000014676	srpra	100	84.816	Oryzias_latipes
ENSSDUG00000013920	srpra	100	77.709	ENSORLG00020009240	srpra	100	84.816	Oryzias_latipes_hni
ENSSDUG00000013920	srpra	100	78.831	ENSORLG00015015405	srpra	100	84.356	Oryzias_latipes_hsok
ENSSDUG00000013920	srpra	100	81.320	ENSOMEG00000005872	srpra	100	84.178	Oryzias_melastigma
ENSSDUG00000013920	srpra	100	66.667	ENSOGAG00000008926	SRPRA	100	66.616	Otolemur_garnettii
ENSSDUG00000013920	srpra	100	63.807	ENSOARG00000012397	SRPRA	100	65.474	Ovis_aries
ENSSDUG00000013920	srpra	100	67.031	ENSPPAG00000030813	SRPRA	100	67.031	Pan_paniscus
ENSSDUG00000013920	srpra	100	66.927	ENSPPRG00000001542	SRPRA	100	66.920	Panthera_pardus
ENSSDUG00000013920	srpra	100	66.771	ENSPTIG00000006989	SRPRA	100	66.768	Panthera_tigris_altaica
ENSSDUG00000013920	srpra	100	67.031	ENSPTRG00000028360	SRPRA	100	67.031	Pan_troglodytes
ENSSDUG00000013920	srpra	100	67.188	ENSPANG00000010858	SRPRA	100	67.188	Papio_anubis
ENSSDUG00000013920	srpra	100	74.720	ENSPKIG00000016106	srpra	100	76.758	Paramormyrops_kingsleyae
ENSSDUG00000013920	srpra	93	66.831	ENSPSIG00000012009	SRPRA	100	68.821	Pelodiscus_sinensis
ENSSDUG00000013920	srpra	100	79.370	ENSPMGG00000001393	srpra	100	84.275	Periophthalmus_magnuspinnatus
ENSSDUG00000013920	srpra	100	66.771	ENSPEMG00000018279	Srpr	100	67.136	Peromyscus_maniculatus_bairdii
ENSSDUG00000013920	srpra	99	60.686	ENSPMAG00000009559	srpra	99	61.504	Petromyzon_marinus
ENSSDUG00000013920	srpra	100	66.044	ENSPCIG00000010207	SRPRA	100	66.927	Phascolarctos_cinereus
ENSSDUG00000013920	srpra	92	89.724	ENSPFOG00000003114	srpra	100	89.724	Poecilia_formosa
ENSSDUG00000013920	srpra	100	88.416	ENSPLAG00000007323	srpra	100	89.724	Poecilia_latipinna
ENSSDUG00000013920	srpra	100	88.435	ENSPMEG00000015658	srpra	100	89.571	Poecilia_mexicana
ENSSDUG00000013920	srpra	100	88.075	ENSPREG00000004937	srpra	100	89.094	Poecilia_reticulata
ENSSDUG00000013920	srpra	88	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSSDUG00000013920	srpra	62	90.698	ENSPCAG00000003801	-	63	90.698	Procavia_capensis
ENSSDUG00000013920	srpra	100	66.719	ENSPCOG00000025726	SRPRA	100	66.970	Propithecus_coquereli
ENSSDUG00000013920	srpra	100	66.771	ENSPVAG00000000993	SRPRA	100	66.301	Pteropus_vampyrus
ENSSDUG00000013920	srpra	92	87.711	ENSPNYG00000012371	srpra	100	87.404	Pundamilia_nyererei
ENSSDUG00000013920	srpra	100	72.488	ENSPNAG00000013476	srpra	100	78.015	Pygocentrus_nattereri
ENSSDUG00000013920	srpra	100	66.771	ENSRNOG00000010543	Srpra	100	67.136	Rattus_norvegicus
ENSSDUG00000013920	srpra	100	67.031	ENSRBIG00000008702	SRPRA	100	67.031	Rhinopithecus_bieti
ENSSDUG00000013920	srpra	100	67.083	ENSRROG00000029494	SRPRA	100	67.083	Rhinopithecus_roxellana
ENSSDUG00000013920	srpra	62	40.104	YDR292C	-	52	42.553	Saccharomyces_cerevisiae
ENSSDUG00000013920	srpra	100	66.719	ENSSBOG00000035892	SRPRA	100	66.719	Saimiri_boliviensis_boliviensis
ENSSDUG00000013920	srpra	93	65.557	ENSSHAG00000009168	SRPRA	100	66.223	Sarcophilus_harrisii
ENSSDUG00000013920	srpra	100	80.268	ENSSFOG00015008837	srpra	100	80.268	Scleropages_formosus
ENSSDUG00000013920	srpra	100	84.754	ENSSMAG00000002783	srpra	100	84.754	Scophthalmus_maximus
ENSSDUG00000013920	srpra	100	98.864	ENSSLDG00000008601	srpra	100	98.864	Seriola_lalandi_dorsalis
ENSSDUG00000013920	srpra	79	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSSDUG00000013920	srpra	100	66.667	ENSSPUG00000018221	SRPRA	100	68.333	Sphenodon_punctatus
ENSSDUG00000013920	srpra	92	91.590	ENSSPAG00000005103	srpra	100	91.590	Stegastes_partitus
ENSSDUG00000013920	srpra	100	67.344	ENSSSCG00000015227	SRPRA	100	67.344	Sus_scrofa
ENSSDUG00000013920	srpra	93	65.397	ENSTGUG00000000815	SRPRA	100	67.042	Taeniopygia_guttata
ENSSDUG00000013920	srpra	100	82.324	ENSTRUG00000006856	srpra	100	85.890	Takifugu_rubripes
ENSSDUG00000013920	srpra	100	74.734	ENSTNIG00000010316	srpra	100	80.000	Tetraodon_nigroviridis
ENSSDUG00000013920	srpra	100	66.615	ENSTTRG00000001558	SRPRA	100	67.239	Tursiops_truncatus
ENSSDUG00000013920	srpra	100	67.134	ENSUAMG00000005510	SRPRA	100	66.927	Ursus_americanus
ENSSDUG00000013920	srpra	96	59.871	ENSUMAG00000002269	SRPRA	100	61.650	Ursus_maritimus
ENSSDUG00000013920	srpra	66	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSSDUG00000013920	srpra	100	66.562	ENSVVUG00000020094	SRPRA	100	67.031	Vulpes_vulpes
ENSSDUG00000013920	srpra	100	57.186	ENSXETG00000003920	srpra	100	60.597	Xenopus_tropicalis
ENSSDUG00000013920	srpra	100	79.592	ENSXCOG00000001286	srpra	100	95.195	Xiphophorus_couchianus
ENSSDUG00000013920	srpra	92	88.190	ENSXMAG00000028401	srpra	100	88.190	Xiphophorus_maculatus