EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014026 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 21677 bases
Position: chrBDQW01000538.1:2251299-2272975
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019230	RRM_1	PF00076.22	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019574	-	3016	-	ENSSDUP00000019230	509 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000014026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014026	-	100	56.439	ENSSDUG00000008651	zgc:123010	99	54.459
ENSSDUG00000014026	-	62	32.172	ENSSDUG00000003213	si:dkey-33c12.4	58	32.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014026	-	100	55.408	ENSAPOG00000019633	zgc:123010	99	55.028	Acanthochromis_polyacanthus
ENSSDUG00000014026	-	78	75.505	ENSAPOG00000001034	-	91	76.190	Acanthochromis_polyacanthus
ENSSDUG00000014026	-	71	61.308	ENSACIG00000021684	zgc:123010	89	61.308	Amphilophus_citrinellus
ENSSDUG00000014026	-	100	55.787	ENSAOCG00000005910	zgc:123010	99	55.408	Amphiprion_ocellaris
ENSSDUG00000014026	-	100	55.598	ENSAPEG00000014305	zgc:123010	99	55.408	Amphiprion_percula
ENSSDUG00000014026	-	99	73.228	ENSATEG00000022160	-	99	73.228	Anabas_testudineus
ENSSDUG00000014026	-	100	55.028	ENSATEG00000001220	zgc:123010	75	60.644	Anabas_testudineus
ENSSDUG00000014026	-	100	71.624	ENSACLG00000012346	-	100	71.233	Astatotilapia_calliptera
ENSSDUG00000014026	-	100	56.322	ENSACLG00000010188	zgc:123010	75	60.459	Astatotilapia_calliptera
ENSSDUG00000014026	-	100	52.788	ENSAMXG00000041967	zgc:123010	99	52.788	Astyanax_mexicanus
ENSSDUG00000014026	-	92	30.755	ENSAMXG00000010871	si:dkey-33c12.4	64	31.175	Astyanax_mexicanus
ENSSDUG00000014026	-	70	31.250	ENSCPBG00000024454	-	60	31.604	Chrysemys_picta_bellii
ENSSDUG00000014026	-	79	55.961	ENSCSEG00000006468	zgc:123010	66	52.998	Cynoglossus_semilaevis
ENSSDUG00000014026	-	53	36.058	ENSCVAG00000004187	-	52	37.838	Cyprinodon_variegatus
ENSSDUG00000014026	-	100	55.703	ENSCVAG00000013288	zgc:123010	99	55.449	Cyprinodon_variegatus
ENSSDUG00000014026	-	75	58.808	ENSDARG00000039082	zgc:123010	77	58.808	Danio_rerio
ENSSDUG00000014026	-	71	30.095	ENSDARG00000057890	si:dkey-33c12.4	64	30.095	Danio_rerio
ENSSDUG00000014026	-	61	35.775	ENSEBUG00000001368	-	59	36.338	Eptatretus_burgeri
ENSSDUG00000014026	-	100	58.755	ENSELUG00000021447	-	82	61.594	Esox_lucius
ENSSDUG00000014026	-	100	52.852	ENSELUG00000022008	zgc:123010	86	57.459	Esox_lucius
ENSSDUG00000014026	-	90	30.601	ENSELUG00000002009	si:dkey-33c12.4	93	33.136	Esox_lucius
ENSSDUG00000014026	-	100	55.344	ENSFHEG00000002306	zgc:123010	73	61.658	Fundulus_heteroclitus
ENSSDUG00000014026	-	61	30.108	ENSFHEG00000005521	si:dkey-33c12.4	55	30.108	Fundulus_heteroclitus
ENSSDUG00000014026	-	75	57.702	ENSGMOG00000018473	zgc:123010	99	57.702	Gadus_morhua
ENSSDUG00000014026	-	69	31.298	ENSGALG00000036747	TTC31	62	33.742	Gallus_gallus
ENSSDUG00000014026	-	100	54.598	ENSGAFG00000009373	zgc:123010	99	53.743	Gambusia_affinis
ENSSDUG00000014026	-	61	35.737	ENSGACG00000004936	-	92	34.906	Gasterosteus_aculeatus
ENSSDUG00000014026	-	72	61.081	ENSGACG00000007620	zgc:123010	96	61.081	Gasterosteus_aculeatus
ENSSDUG00000014026	-	100	72.211	ENSHBUG00000016720	-	100	71.820	Haplochromis_burtoni
ENSSDUG00000014026	-	90	30.916	ENSIPUG00000005998	si:dkey-33c12.4	63	33.007	Ictalurus_punctatus
ENSSDUG00000014026	-	100	52.542	ENSKMAG00000021350	zgc:123010	73	61.598	Kryptolebias_marmoratus
ENSSDUG00000014026	-	100	73.294	ENSLBEG00000013518	-	100	73.099	Labrus_bergylta
ENSSDUG00000014026	-	100	54.962	ENSLBEG00000023984	zgc:123010	99	56.107	Labrus_bergylta
ENSSDUG00000014026	-	86	47.826	ENSLACG00000009001	zgc:123010	86	51.128	Latimeria_chalumnae
ENSSDUG00000014026	-	89	31.298	ENSLOCG00000001861	-	65	32.947	Lepisosteus_oculatus
ENSSDUG00000014026	-	100	53.398	ENSLOCG00000008967	zgc:123010	80	55.635	Lepisosteus_oculatus
ENSSDUG00000014026	-	71	73.003	ENSMAMG00000002377	-	82	73.003	Mastacembelus_armatus
ENSSDUG00000014026	-	78	63.659	ENSMAMG00000003394	-	98	63.391	Mastacembelus_armatus
ENSSDUG00000014026	-	71	72.727	ENSMAMG00000002460	-	86	72.727	Mastacembelus_armatus
ENSSDUG00000014026	-	71	61.475	ENSMAMG00000001145	zgc:123010	85	61.475	Mastacembelus_armatus
ENSSDUG00000014026	-	78	63.158	ENSMAMG00000003439	-	98	62.899	Mastacembelus_armatus
ENSSDUG00000014026	-	62	31.481	ENSMAMG00000000111	si:dkey-33c12.4	54	31.989	Mastacembelus_armatus
ENSSDUG00000014026	-	100	56.322	ENSMZEG00005027733	zgc:123010	75	60.459	Maylandia_zebra
ENSSDUG00000014026	-	78	72.569	ENSMZEG00005014740	-	99	72.569	Maylandia_zebra
ENSSDUG00000014026	-	71	63.686	ENSMMOG00000017955	-	86	63.686	Mola_mola
ENSSDUG00000014026	-	75	57.592	ENSMMOG00000010544	zgc:123010	84	55.802	Mola_mola
ENSSDUG00000014026	-	100	54.735	ENSMALG00000017698	zgc:123010	73	60.668	Monopterus_albus
ENSSDUG00000014026	-	61	31.806	ENSMALG00000002265	si:dkey-33c12.4	59	31.378	Monopterus_albus
ENSSDUG00000014026	-	91	54.176	ENSNBRG00000021157	zgc:123010	83	58.421	Neolamprologus_brichardi
ENSSDUG00000014026	-	50	42.254	ENSONIG00000007538	-	98	36.719	Oreochromis_niloticus
ENSSDUG00000014026	-	59	75.920	ENSONIG00000000297	-	100	75.920	Oreochromis_niloticus
ENSSDUG00000014026	-	85	53.452	ENSONIG00000018353	zgc:123010	74	59.946	Oreochromis_niloticus
ENSSDUG00000014026	-	61	34.628	ENSONIG00000012263	-	98	34.154	Oreochromis_niloticus
ENSSDUG00000014026	-	91	53.878	ENSORLG00000007675	zgc:123010	99	52.941	Oryzias_latipes
ENSSDUG00000014026	-	91	53.878	ENSORLG00020003457	zgc:123010	99	52.941	Oryzias_latipes_hni
ENSSDUG00000014026	-	100	54.721	ENSORLG00015008373	zgc:123010	99	54.721	Oryzias_latipes_hsok
ENSSDUG00000014026	-	56	30.137	ENSOMEG00000009428	-	58	30.137	Oryzias_melastigma
ENSSDUG00000014026	-	100	56.046	ENSOMEG00000003408	zgc:123010	99	54.808	Oryzias_melastigma
ENSSDUG00000014026	-	75	56.959	ENSPKIG00000015521	zgc:123010	84	56.959	Paramormyrops_kingsleyae
ENSSDUG00000014026	-	89	33.333	ENSPKIG00000011819	-	62	34.804	Paramormyrops_kingsleyae
ENSSDUG00000014026	-	80	50.725	ENSPMGG00000020251	zgc:123010	89	50.617	Periophthalmus_magnuspinnatus
ENSSDUG00000014026	-	58	40.614	ENSPMAG00000004544	zgc:123010	99	40.614	Petromyzon_marinus
ENSSDUG00000014026	-	100	54.493	ENSPFOG00000001073	zgc:123010	99	54.215	Poecilia_formosa
ENSSDUG00000014026	-	100	54.493	ENSPLAG00000007711	zgc:123010	99	54.215	Poecilia_latipinna
ENSSDUG00000014026	-	100	54.389	ENSPMEG00000005092	zgc:123010	99	54.215	Poecilia_mexicana
ENSSDUG00000014026	-	71	57.576	ENSPREG00000019587	zgc:123010	79	57.025	Poecilia_reticulata
ENSSDUG00000014026	-	100	56.430	ENSPNYG00000007893	zgc:123010	75	60.358	Pundamilia_nyererei
ENSSDUG00000014026	-	71	64.286	ENSPNYG00000023304	-	87	64.286	Pundamilia_nyererei
ENSSDUG00000014026	-	100	55.792	ENSPNAG00000007579	zgc:123010	99	55.792	Pygocentrus_nattereri
ENSSDUG00000014026	-	70	32.374	ENSPNAG00000018386	si:dkey-33c12.4	63	32.374	Pygocentrus_nattereri
ENSSDUG00000014026	-	100	54.286	ENSSFOG00015021394	zgc:123010	99	53.359	Scleropages_formosus
ENSSDUG00000014026	-	61	32.295	ENSSFOG00015009199	-	55	32.295	Scleropages_formosus
ENSSDUG00000014026	-	69	33.929	ENSSFOG00015005186	-	64	34.152	Scleropages_formosus
ENSSDUG00000014026	-	100	55.577	ENSSMAG00000002904	zgc:123010	99	52.820	Scophthalmus_maximus
ENSSDUG00000014026	-	82	33.099	ENSSMAG00000008147	si:dkey-33c12.4	50	33.929	Scophthalmus_maximus
ENSSDUG00000014026	-	100	71.176	ENSSMAG00000021096	-	97	71.176	Scophthalmus_maximus
ENSSDUG00000014026	-	100	56.597	ENSSLDG00000019386	zgc:123010	99	54.876	Seriola_lalandi_dorsalis
ENSSDUG00000014026	-	62	32.440	ENSSLDG00000009448	si:dkey-33c12.4	54	32.440	Seriola_lalandi_dorsalis
ENSSDUG00000014026	-	100	55.408	ENSSPAG00000013621	zgc:123010	99	54.426	Stegastes_partitus
ENSSDUG00000014026	-	58	40.909	ENSTRUG00000022374	si:dkey-33c12.4	53	31.016	Takifugu_rubripes
ENSSDUG00000014026	-	100	50.285	ENSTRUG00000024824	zgc:123010	71	59.189	Takifugu_rubripes
ENSSDUG00000014026	-	63	32.970	ENSTRUG00000000057	-	66	32.880	Takifugu_rubripes
ENSSDUG00000014026	-	61	34.727	ENSTNIG00000010542	-	92	34.936	Tetraodon_nigroviridis
ENSSDUG00000014026	-	64	56.973	ENSTNIG00000001303	zgc:123010	99	56.973	Tetraodon_nigroviridis
ENSSDUG00000014026	-	59	49.667	ENSXETG00000033896	-	99	49.667	Xenopus_tropicalis
ENSSDUG00000014026	-	74	57.326	ENSXCOG00000012281	zgc:123010	83	58.090	Xiphophorus_couchianus
ENSSDUG00000014026	-	100	54.023	ENSXMAG00000002598	zgc:123010	99	54.598	Xiphophorus_maculatus