EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000014078 (Gene tree)
Gene ID
111222176
Gene Symbol
zc3h12b
Alias
si:dkey-286f3.6
Full Name
zinc finger CCCH-type containing 12B
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
3488 bases
Position
chrBDQW01000091.1:314702-318189
Accession
111222176
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000019347RNase_Zc3h12aPF11977.85.1e-6611
ENSSDUP00000019362RNase_Zc3h12aPF11977.85.2e-6611
ENSSDUP00000019382RNase_Zc3h12aPF11977.81.5e-5911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000019708-2523XM_022745773ENSSDUP00000019362840 (aa)XP_022601494-
ENSSDUT00000019728-810-ENSSDUP00000019382269 (aa)--
ENSSDUT00000019693-2493-ENSSDUP00000019347830 (aa)--
Gene Model
Click here to download ENSSDUG00000014078's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014078's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000014078zc3h12b8669.565ENSSDUG00000021864-8544.807
ENSSDUG00000014078zc3h12b8470.248ENSSDUG00000013237-9066.438
ENSSDUG00000014078zc3h12b8261.572ENSSDUG00000007162si:dkey-206d17.125358.140
ENSSDUG00000014078zc3h12b8359.193ENSSDUG00000010581-9056.780
ENSSDUG00000014078zc3h12b8959.919ENSSDUG00000009879zc3h12a5460.294
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000014078zc3h12b9968.365ENSG00000102053ZC3H12B9968.290Homo_sapiens
ENSSDUG00000014078zc3h12b10095.719ENSAPOG00000001738zc3h12b9995.719Acanthochromis_polyacanthus
ENSSDUG00000014078zc3h12b7672.327ENSAMEG00000006955ZC3H12B9972.214Ailuropoda_melanoleuca
ENSSDUG00000014078zc3h12b8370.464ENSACIG00000005689-7967.843Amphilophus_citrinellus
ENSSDUG00000014078zc3h12b10095.368ENSACIG00000009787zc3h12b10095.368Amphilophus_citrinellus
ENSSDUG00000014078zc3h12b10095.838ENSAOCG00000010094zc3h12b9995.838Amphiprion_ocellaris
ENSSDUG00000014078zc3h12b10095.838ENSAPEG00000007479zc3h12b9995.838Amphiprion_percula
ENSSDUG00000014078zc3h12b10094.887ENSATEG00000011175zc3h12b9994.530Anabas_testudineus
ENSSDUG00000014078zc3h12b8485.088ENSAPLG00000003874ZC3H12B10087.713Anas_platyrhynchos
ENSSDUG00000014078zc3h12b9970.833ENSACAG00000013582ZC3H12B9970.833Anolis_carolinensis
ENSSDUG00000014078zc3h12b9968.602ENSANAG00000010296ZC3H12B9968.483Aotus_nancymaae
ENSSDUG00000014078zc3h12b10093.943ENSACLG00000007669zc3h12b9993.943Astatotilapia_calliptera
ENSSDUG00000014078zc3h12b8463.717ENSAMXG00000038308-8645.327Astyanax_mexicanus
ENSSDUG00000014078zc3h12b8466.814ENSAMXG00000005320-9145.325Astyanax_mexicanus
ENSSDUG00000014078zc3h12b9479.051ENSAMXG00000011328zc3h12b8176.053Astyanax_mexicanus
ENSSDUG00000014078zc3h12b10068.047ENSBTAG00000002206ZC3H12B10067.811Bos_taurus
ENSSDUG00000014078zc3h12b9968.365ENSCJAG00000001427ZC3H12B9968.246Callithrix_jacchus
ENSSDUG00000014078zc3h12b9967.062ENSCAFG00000031307ZC3H12B9966.943Canis_familiaris
ENSSDUG00000014078zc3h12b9967.062ENSCAFG00020017995ZC3H12B9966.943Canis_lupus_dingo
ENSSDUG00000014078zc3h12b7172.081ENSCHIG00000011723ZC3H12B9872.081Capra_hircus
ENSSDUG00000014078zc3h12b9968.483ENSTSYG00000011302ZC3H12B9968.128Carlito_syrichta
ENSSDUG00000014078zc3h12b7467.154ENSCAPG00000000650ZC3H12B10067.154Cavia_aperea
ENSSDUG00000014078zc3h12b9968.483ENSCCAG00000030171ZC3H12B9968.365Cebus_capucinus
ENSSDUG00000014078zc3h12b9968.602ENSCATG00000044845ZC3H12B9968.527Cercocebus_atys
ENSSDUG00000014078zc3h12b9968.409ENSCLAG00000003600ZC3H12B9968.166Chinchilla_lanigera
ENSSDUG00000014078zc3h12b8579.913ENSCSAG00000011955-9867.976Chlorocebus_sabaeus
ENSSDUG00000014078zc3h12b9973.191ENSCPBG00000006983ZC3H12B9973.310Chrysemys_picta_bellii
ENSSDUG00000014078zc3h12b9968.483ENSCANG00000006746ZC3H12B9968.409Colobus_angolensis_palliatus
ENSSDUG00000014078zc3h12b9968.128ENSCGRG00001018643Zc3h12b9967.773Cricetulus_griseus_chok1gshd
ENSSDUG00000014078zc3h12b9968.128ENSCGRG00000015623Zc3h12b9967.773Cricetulus_griseus_crigri
ENSSDUG00000014078zc3h12b9990.408ENSCSEG00000013686zc3h12b10090.408Cynoglossus_semilaevis
ENSSDUG00000014078zc3h12b10091.509ENSCVAG00000010473zc3h12b10090.739Cyprinodon_variegatus
ENSSDUG00000014078zc3h12b9475.244ENSDARG00000062463zc3h12b9775.366Danio_rerio
ENSSDUG00000014078zc3h12b8480.176ENSDNOG00000038439ZC3H12B9964.685Dasypus_novemcinctus
ENSSDUG00000014078zc3h12b9969.022ENSDORG00000024832Zc3h12b9968.957Dipodomys_ordii
ENSSDUG00000014078zc3h12b9359.184ENSETEG00000012095ZC3H12B9459.184Echinops_telfairi
ENSSDUG00000014078zc3h12b9964.573ENSEASG00005006995ZC3H12B9963.863Equus_asinus_asinus
ENSSDUG00000014078zc3h12b9968.521ENSECAG00000020993ZC3H12B9967.811Equus_caballus
ENSSDUG00000014078zc3h12b10083.981ENSELUG00000010689zc3h12b8882.436Esox_lucius
ENSSDUG00000014078zc3h12b10066.982ENSFCAG00000032299ZC3H12B10066.509Felis_catus
ENSSDUG00000014078zc3h12b8484.716ENSFALG00000004293ZC3H12B9475.959Ficedula_albicollis
ENSSDUG00000014078zc3h12b9968.284ENSFDAG00000014258ZC3H12B9968.090Fukomys_damarensis
ENSSDUG00000014078zc3h12b10090.129ENSFHEG00000002391zc3h12b9990.364Fundulus_heteroclitus
ENSSDUG00000014078zc3h12b9167.578ENSFHEG00000014717-7872.036Fundulus_heteroclitus
ENSSDUG00000014078zc3h12b5492.361ENSGMOG00000001804zc3h12b6993.855Gadus_morhua
ENSSDUG00000014078zc3h12b9972.565ENSGALG00000039391ZC3H12B9972.565Gallus_gallus
ENSSDUG00000014078zc3h12b8370.690ENSGAFG00000004701-5174.593Gambusia_affinis
ENSSDUG00000014078zc3h12b10092.145ENSGAFG00000006871zc3h12b9992.380Gambusia_affinis
ENSSDUG00000014078zc3h12b9984.970ENSGACG00000020334zc3h12b10085.333Gasterosteus_aculeatus
ENSSDUG00000014078zc3h12b9973.072ENSGAGG00000005569ZC3H12B9973.191Gopherus_agassizii
ENSSDUG00000014078zc3h12b9968.365ENSGGOG00000024638ZC3H12B9968.290Gorilla_gorilla
ENSSDUG00000014078zc3h12b10093.705ENSHBUG00000000645zc3h12b9993.705Haplochromis_burtoni
ENSSDUG00000014078zc3h12b8470.435ENSHBUG00000003376-9158.824Haplochromis_burtoni
ENSSDUG00000014078zc3h12b9968.284ENSHGLG00000003107ZC3H12B9968.090Heterocephalus_glaber_female
ENSSDUG00000014078zc3h12b9968.284ENSHGLG00100010721ZC3H12B9968.090Heterocephalus_glaber_male
ENSSDUG00000014078zc3h12b9990.898ENSHCOG00000008487zc3h12b10090.898Hippocampus_comes
ENSSDUG00000014078zc3h12b8671.739ENSHCOG00000017425-7762.500Hippocampus_comes
ENSSDUG00000014078zc3h12b8573.913ENSIPUG00000014830-8748.590Ictalurus_punctatus
ENSSDUG00000014078zc3h12b9375.636ENSIPUG00000016745zc3h12b8475.545Ictalurus_punctatus
ENSSDUG00000014078zc3h12b9968.921ENSSTOG00000020962ZC3H12B9968.921Ictidomys_tridecemlineatus
ENSSDUG00000014078zc3h12b9966.983ENSJJAG00000015755Zc3h12b9966.508Jaculus_jaculus
ENSSDUG00000014078zc3h12b10091.795ENSKMAG00000004921zc3h12b10090.898Kryptolebias_marmoratus
ENSSDUG00000014078zc3h12b9993.943ENSLBEG00000006448zc3h12b9993.943Labrus_bergylta
ENSSDUG00000014078zc3h12b9972.459ENSLACG00000014526ZC3H12B9972.986Latimeria_chalumnae
ENSSDUG00000014078zc3h12b9979.499ENSLOCG00000014631zc3h12b8778.835Lepisosteus_oculatus
ENSSDUG00000014078zc3h12b8677.155ENSLOCG00000010717-8654.047Lepisosteus_oculatus
ENSSDUG00000014078zc3h12b9967.219ENSLAFG00000014891ZC3H12B9370.281Loxodonta_africana
ENSSDUG00000014078zc3h12b9968.365ENSMFAG00000042237ZC3H12B9968.290Macaca_fascicularis
ENSSDUG00000014078zc3h12b9968.483ENSMMUG00000012261ZC3H12B9968.409Macaca_mulatta
ENSSDUG00000014078zc3h12b9968.483ENSMNEG00000043003ZC3H12B9968.409Macaca_nemestrina
ENSSDUG00000014078zc3h12b9968.602ENSMLEG00000042630ZC3H12B9968.527Mandrillus_leucophaeus
ENSSDUG00000014078zc3h12b10095.125ENSMAMG00000011770zc3h12b9994.649Mastacembelus_armatus
ENSSDUG00000014078zc3h12b10093.824ENSMZEG00005007548zc3h12b9993.824Maylandia_zebra
ENSSDUG00000014078zc3h12b9973.214ENSMGAG00000000759ZC3H12B9973.214Meleagris_gallopavo
ENSSDUG00000014078zc3h12b9968.558ENSMAUG00000017800Zc3h12b9967.811Mesocricetus_auratus
ENSSDUG00000014078zc3h12b9968.957ENSMICG00000010697ZC3H12B9968.602Microcebus_murinus
ENSSDUG00000014078zc3h12b9967.929ENSMOCG00000000094Zc3h12b9967.456Microtus_ochrogaster
ENSSDUG00000014078zc3h12b9991.469ENSMMOG00000008734zc3h12b9991.469Mola_mola
ENSSDUG00000014078zc3h12b9968.396ENSMODG00000005206ZC3H12B9371.465Monodelphis_domestica
ENSSDUG00000014078zc3h12b8373.543ENSMALG00000016807-8558.904Monopterus_albus
ENSSDUG00000014078zc3h12b10088.717ENSMALG00000021153zc3h12b10088.242Monopterus_albus
ENSSDUG00000014078zc3h12b9967.536ENSMUSG00000035045Zc3h12b9966.904Mus_musculus
ENSSDUG00000014078zc3h12b9967.536MGP_PahariEiJ_G0031787Zc3h12b9967.417Mus_pahari
ENSSDUG00000014078zc3h12b9967.536MGP_SPRETEiJ_G0034413Zc3h12b9966.904Mus_spretus
ENSSDUG00000014078zc3h12b9967.062ENSMPUG00000001162ZC3H12B9966.706Mustela_putorius_furo
ENSSDUG00000014078zc3h12b9968.825ENSMLUG00000013635ZC3H12B9471.943Myotis_lucifugus
ENSSDUG00000014078zc3h12b10093.824ENSNBRG00000014889zc3h12b9993.824Neolamprologus_brichardi
ENSSDUG00000014078zc3h12b9968.602ENSNLEG00000000383ZC3H12B9968.409Nomascus_leucogenys
ENSSDUG00000014078zc3h12b9864.571ENSMEUG00000014075ZC3H12B8972.263Notamacropus_eugenii
ENSSDUG00000014078zc3h12b10093.238ENSONIG00000012867zc3h12b9993.238Oreochromis_niloticus
ENSSDUG00000014078zc3h12b7357.401ENSOANG00000008267-10057.401Ornithorhynchus_anatinus
ENSSDUG00000014078zc3h12b9968.802ENSOCUG00000006130ZC3H12B9968.609Oryctolagus_cuniculus
ENSSDUG00000014078zc3h12b8667.470ENSORLG00000009188-6271.341Oryzias_latipes
ENSSDUG00000014078zc3h12b10091.127ENSORLG00000009556zc3h12b10091.127Oryzias_latipes
ENSSDUG00000014078zc3h12b8964.773ENSORLG00020019033-9066.667Oryzias_latipes_hni
ENSSDUG00000014078zc3h12b9992.024ENSORLG00020021793zc3h12b9992.024Oryzias_latipes_hni
ENSSDUG00000014078zc3h12b9992.143ENSORLG00015004818zc3h12b9992.143Oryzias_latipes_hsok
ENSSDUG00000014078zc3h12b9363.273ENSORLG00015020619-9965.038Oryzias_latipes_hsok
ENSSDUG00000014078zc3h12b10091.795ENSOMEG00000005768zc3h12b9991.795Oryzias_melastigma
ENSSDUG00000014078zc3h12b9968.365ENSOGAG00000029439ZC3H12B9968.009Otolemur_garnettii
ENSSDUG00000014078zc3h12b9968.009ENSOARG00000004959ZC3H12B9968.009Ovis_aries
ENSSDUG00000014078zc3h12b9968.365ENSPPAG00000039530ZC3H12B9968.290Pan_paniscus
ENSSDUG00000014078zc3h12b7771.763ENSPPRG00000004966-9571.763Panthera_pardus
ENSSDUG00000014078zc3h12b7672.283ENSPTIG00000005571ZC3H12B9972.170Panthera_tigris_altaica
ENSSDUG00000014078zc3h12b9968.365ENSPTRG00000021969ZC3H12B9968.290Pan_troglodytes
ENSSDUG00000014078zc3h12b9968.602ENSPANG00000007944ZC3H12B9968.527Papio_anubis
ENSSDUG00000014078zc3h12b8685.345ENSPKIG00000012946zc3h12b9476.178Paramormyrops_kingsleyae
ENSSDUG00000014078zc3h12b9976.291ENSPKIG00000019893ZC3H12B9976.291Paramormyrops_kingsleyae
ENSSDUG00000014078zc3h12b8474.348ENSPKIG00000012595-8047.098Paramormyrops_kingsleyae
ENSSDUG00000014078zc3h12b9973.397ENSPSIG00000016853ZC3H12B9972.835Pelodiscus_sinensis
ENSSDUG00000014078zc3h12b10088.305ENSPMGG00000006009zc3h12b10088.305Periophthalmus_magnuspinnatus
ENSSDUG00000014078zc3h12b9966.667ENSPCIG00000020264ZC3H12B9966.352Phascolarctos_cinereus
ENSSDUG00000014078zc3h12b10092.235ENSPFOG00000019365zc3h12b9992.353Poecilia_formosa
ENSSDUG00000014078zc3h12b9991.381ENSPLAG00000011981zc3h12b9988.954Poecilia_latipinna
ENSSDUG00000014078zc3h12b8371.121ENSPLAG00000011687-7672.222Poecilia_latipinna
ENSSDUG00000014078zc3h12b10088.941ENSPMEG00000002552zc3h12b9989.059Poecilia_mexicana
ENSSDUG00000014078zc3h12b10091.080ENSPREG00000020794zc3h12b9991.315Poecilia_reticulata
ENSSDUG00000014078zc3h12b9172.985ENSPPYG00000020416ZC3H12B9472.985Pongo_abelii
ENSSDUG00000014078zc3h12b9070.000ENSPCAG00000016422ZC3H12B9463.949Procavia_capensis
ENSSDUG00000014078zc3h12b9968.994ENSPCOG00000020467ZC3H12B9968.639Propithecus_coquereli
ENSSDUG00000014078zc3h12b9365.693ENSPVAG00000017352ZC3H12B8865.693Pteropus_vampyrus
ENSSDUG00000014078zc3h12b8867.611ENSPNYG00000007151-9355.488Pundamilia_nyererei
ENSSDUG00000014078zc3h12b10093.587ENSPNYG00000018012zc3h12b9993.587Pundamilia_nyererei
ENSSDUG00000014078zc3h12b8872.269ENSPNYG00000015874-8372.269Pundamilia_nyererei
ENSSDUG00000014078zc3h12b8476.316ENSPNAG00000017483-8749.936Pygocentrus_nattereri
ENSSDUG00000014078zc3h12b9378.841ENSPNAG00000002567zc3h12b9278.868Pygocentrus_nattereri
ENSSDUG00000014078zc3h12b9967.773ENSRNOG00000011508Zc3h12b9966.904Rattus_norvegicus
ENSSDUG00000014078zc3h12b9968.602ENSRBIG00000036402ZC3H12B9968.527Rhinopithecus_bieti
ENSSDUG00000014078zc3h12b9968.483ENSRROG00000036004ZC3H12B9968.409Rhinopithecus_roxellana
ENSSDUG00000014078zc3h12b9968.602ENSSBOG00000004095ZC3H12B9968.483Saimiri_boliviensis_boliviensis
ENSSDUG00000014078zc3h12b9967.568ENSSHAG00000006530ZC3H12B9967.098Sarcophilus_harrisii
ENSSDUG00000014078zc3h12b9977.804ENSSFOG00015008769zc3h12b9978.665Scleropages_formosus
ENSSDUG00000014078zc3h12b9977.032ENSSFOG00015012866ZC3H12B9876.561Scleropages_formosus
ENSSDUG00000014078zc3h12b10095.012ENSSMAG00000018309zc3h12b9995.012Scophthalmus_maximus
ENSSDUG00000014078zc3h12b10099.167ENSSLDG00000018895zc3h12b9999.167Seriola_lalandi_dorsalis
ENSSDUG00000014078zc3h12b9951.367ENSSARG00000002292ZC3H12B9254.569Sorex_araneus
ENSSDUG00000014078zc3h12b9474.603ENSSPUG00000014175ZC3H12B9770.455Sphenodon_punctatus
ENSSDUG00000014078zc3h12b10095.957ENSSPAG00000022460zc3h12b9995.957Stegastes_partitus
ENSSDUG00000014078zc3h12b9968.602ENSSSCG00000012367ZC3H12B9371.939Sus_scrofa
ENSSDUG00000014078zc3h12b9972.447ENSTGUG00000002846ZC3H12B9972.361Taeniopygia_guttata
ENSSDUG00000014078zc3h12b8369.828ENSTRUG00000015402-6273.482Takifugu_rubripes
ENSSDUG00000014078zc3h12b9688.476ENSTRUG00000012186zc3h12b9988.543Takifugu_rubripes
ENSSDUG00000014078zc3h12b9291.924ENSTNIG00000011828zc3h12b10091.924Tetraodon_nigroviridis
ENSSDUG00000014078zc3h12b9361.480ENSTBEG00000011540ZC3H12B8571.704Tupaia_belangeri
ENSSDUG00000014078zc3h12b8182.500ENSTTRG00000007468ZC3H12B7682.500Tursiops_truncatus
ENSSDUG00000014078zc3h12b9966.865ENSUAMG00000005098ZC3H12B9966.865Ursus_americanus
ENSSDUG00000014078zc3h12b9966.865ENSUMAG00000017054ZC3H12B9966.865Ursus_maritimus
ENSSDUG00000014078zc3h12b9170.597ENSVPAG00000009070ZC3H12B9370.597Vicugna_pacos
ENSSDUG00000014078zc3h12b9967.180ENSVVUG00000022686ZC3H12B9967.062Vulpes_vulpes
ENSSDUG00000014078zc3h12b10067.057ENSXETG00000017794zc3h12b9966.549Xenopus_tropicalis
ENSSDUG00000014078zc3h12b8373.094ENSXCOG00000007996-8370.996Xiphophorus_couchianus
ENSSDUG00000014078zc3h12b10092.115ENSXCOG00000006151zc3h12b10092.115Xiphophorus_couchianus
ENSSDUG00000014078zc3h12b10091.784ENSXMAG00000018548zc3h12b9991.784Xiphophorus_maculatus

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