EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014082 (Gene tree)
Gene ID: 111224856
Gene Symbol: si:cabz01085950.1
Alias: -
Full Name: RAS like estrogen regulated growth inhibitor
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 38084 bases
Position: chrBDQW01000138.1:14147266-14185349
Accession: 111224856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019312	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019658	-	1806	XM_022749541	ENSSDUP00000019312	200 (aa)	XP_022605262	UPI000BBF389A

Gene Model

Click here to download ENSSDUG00000014082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014082	si:cabz01085950.1	84	34.884	ENSSDUG00000005627	rab15	79	34.884
ENSSDUG00000014082	si:cabz01085950.1	86	34.857	ENSSDUG00000013724	rab2a	80	34.857
ENSSDUG00000014082	si:cabz01085950.1	82	32.934	ENSSDUG00000002965	rab11ba	75	32.530
ENSSDUG00000014082	si:cabz01085950.1	71	33.784	ENSSDUG00000001791	rab33ba	60	33.784
ENSSDUG00000014082	si:cabz01085950.1	83	34.132	ENSSDUG00000005719	si:dkey-16l2.16	82	34.091
ENSSDUG00000014082	si:cabz01085950.1	80	39.157	ENSSDUG00000022959	rasl11b	76	37.113
ENSSDUG00000014082	si:cabz01085950.1	79	30.247	ENSSDUG00000011555	nkiras1	83	30.247
ENSSDUG00000014082	si:cabz01085950.1	82	30.120	ENSSDUG00000011851	rab42a	75	30.120
ENSSDUG00000014082	si:cabz01085950.1	82	33.728	ENSSDUG00000014091	-	77	33.728
ENSSDUG00000014082	si:cabz01085950.1	77	30.323	ENSSDUG00000023508	rab23	72	31.757
ENSSDUG00000014082	si:cabz01085950.1	72	33.108	ENSSDUG00000021882	rab6ba	70	33.108
ENSSDUG00000014082	si:cabz01085950.1	87	32.022	ENSSDUG00000013496	-	83	32.022
ENSSDUG00000014082	si:cabz01085950.1	81	32.317	ENSSDUG00000005960	rab18b	79	32.317
ENSSDUG00000014082	si:cabz01085950.1	74	33.557	ENSSDUG00000006618	RAB17	65	33.557
ENSSDUG00000014082	si:cabz01085950.1	82	32.934	ENSSDUG00000013558	rab11bb	74	32.934
ENSSDUG00000014082	si:cabz01085950.1	82	30.357	ENSSDUG00000004698	rab1ba	81	30.357
ENSSDUG00000014082	si:cabz01085950.1	84	44.048	ENSSDUG00000019086	hrasb	87	44.048
ENSSDUG00000014082	si:cabz01085950.1	88	33.333	ENSSDUG00000016858	-	95	33.333
ENSSDUG00000014082	si:cabz01085950.1	84	30.460	ENSSDUG00000005037	-	80	30.460
ENSSDUG00000014082	si:cabz01085950.1	72	33.108	ENSSDUG00000009251	rab6bb	70	33.108
ENSSDUG00000014082	si:cabz01085950.1	97	32.487	ENSSDUG00000004445	zgc:171927	87	32.487
ENSSDUG00000014082	si:cabz01085950.1	72	32.877	ENSSDUG00000009835	rab5aa	67	32.877
ENSSDUG00000014082	si:cabz01085950.1	84	31.792	ENSSDUG00000007575	rab9b	84	31.792
ENSSDUG00000014082	si:cabz01085950.1	71	31.944	ENSSDUG00000006278	rab11al	66	31.944
ENSSDUG00000014082	si:cabz01085950.1	82	35.366	ENSSDUG00000007311	rhebl1	88	35.366
ENSSDUG00000014082	si:cabz01085950.1	82	30.952	ENSSDUG00000016888	rab1ab	75	30.952
ENSSDUG00000014082	si:cabz01085950.1	55	41.441	ENSSDUG00000017824	-	87	42.742
ENSSDUG00000014082	si:cabz01085950.1	72	32.877	ENSSDUG00000023008	rab5c	66	32.877
ENSSDUG00000014082	si:cabz01085950.1	81	30.675	ENSSDUG00000013050	-	74	30.675
ENSSDUG00000014082	si:cabz01085950.1	71	32.432	ENSSDUG00000013968	rab33a	61	32.432
ENSSDUG00000014082	si:cabz01085950.1	82	30.952	ENSSDUG00000022535	RAB1A	81	30.952
ENSSDUG00000014082	si:cabz01085950.1	81	36.471	ENSSDUG00000004633	RAB15	76	36.471
ENSSDUG00000014082	si:cabz01085950.1	88	31.667	ENSSDUG00000002580	rab11a	81	31.667
ENSSDUG00000014082	si:cabz01085950.1	71	34.868	ENSSDUG00000019885	-	62	34.868
ENSSDUG00000014082	si:cabz01085950.1	56	41.071	ENSSDUG00000014258	RAP2B	89	42.742
ENSSDUG00000014082	si:cabz01085950.1	84	30.636	ENSSDUG00000003386	rab9a	84	30.636
ENSSDUG00000014082	si:cabz01085950.1	80	34.161	ENSSDUG00000015982	rasd4	76	34.161
ENSSDUG00000014082	si:cabz01085950.1	94	33.161	ENSSDUG00000020340	-	92	33.161
ENSSDUG00000014082	si:cabz01085950.1	83	32.353	ENSSDUG00000013325	rab30	81	32.353
ENSSDUG00000014082	si:cabz01085950.1	84	43.452	ENSSDUG00000010675	si:ch73-116o1.2	81	41.011
ENSSDUG00000014082	si:cabz01085950.1	81	30.675	ENSSDUG00000006260	rab25b	82	30.675
ENSSDUG00000014082	si:cabz01085950.1	82	32.927	ENSSDUG00000009122	rheb	88	32.927
ENSSDUG00000014082	si:cabz01085950.1	83	33.533	ENSSDUG00000004950	rab35b	90	32.609
ENSSDUG00000014082	si:cabz01085950.1	87	32.584	ENSSDUG00000006307	-	87	32.584
ENSSDUG00000014082	si:cabz01085950.1	84	30.058	ENSSDUG00000008011	-	82	30.058
ENSSDUG00000014082	si:cabz01085950.1	82	32.934	ENSSDUG00000002934	-	74	32.934
ENSSDUG00000014082	si:cabz01085950.1	76	43.137	ENSSDUG00000023163	rras2	80	43.902
ENSSDUG00000014082	si:cabz01085950.1	72	32.432	ENSSDUG00000018970	RAB6B	69	32.432
ENSSDUG00000014082	si:cabz01085950.1	73	31.126	ENSSDUG00000019738	si:dkey-13a21.4	74	31.126
ENSSDUG00000014082	si:cabz01085950.1	83	44.578	ENSSDUG00000017779	kras	96	42.935
ENSSDUG00000014082	si:cabz01085950.1	91	38.421	ENSSDUG00000015078	rasl11a	74	38.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSG00000134533	RERG	100	89.474	Homo_sapiens
ENSSDUG00000014082	si:cabz01085950.1	100	99.000	ENSAPOG00000015680	-	100	99.000	Acanthochromis_polyacanthus
ENSSDUG00000014082	si:cabz01085950.1	100	98.500	ENSAOCG00000010160	si:cabz01085950.1	100	98.500	Amphiprion_ocellaris
ENSSDUG00000014082	si:cabz01085950.1	100	98.500	ENSAPEG00000018205	si:cabz01085950.1	100	98.500	Amphiprion_percula
ENSSDUG00000014082	si:cabz01085950.1	100	98.500	ENSATEG00000004893	si:cabz01085950.1	100	98.500	Anabas_testudineus
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSANAG00000034086	RERG	100	82.000	Aotus_nancymaae
ENSSDUG00000014082	si:cabz01085950.1	100	97.500	ENSACLG00000009103	si:cabz01085950.1	100	97.500	Astatotilapia_calliptera
ENSSDUG00000014082	si:cabz01085950.1	100	87.685	ENSAMXG00000033069	si:cabz01085950.1	100	87.685	Astyanax_mexicanus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSBTAG00000002174	RERG	100	82.500	Bos_taurus
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSCJAG00000021602	RERG	100	82.000	Callithrix_jacchus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSCAFG00000012854	RERG	100	82.500	Canis_familiaris
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSCAFG00020007046	RERG	100	82.500	Canis_lupus_dingo
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSCHIG00000011004	RERG	100	82.500	Capra_hircus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSTSYG00000011437	RERG	100	82.500	Carlito_syrichta
ENSSDUG00000014082	si:cabz01085950.1	100	83.000	ENSCPOG00000000528	RERG	100	83.000	Cavia_porcellus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSCCAG00000026139	RERG	100	82.500	Cebus_capucinus
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSCATG00000030178	RERG	100	82.000	Cercocebus_atys
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSCLAG00000016162	RERG	100	82.500	Chinchilla_lanigera
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSCSAG00000008360	RERG	100	82.000	Chlorocebus_sabaeus
ENSSDUG00000014082	si:cabz01085950.1	100	84.000	ENSCPBG00000028244	RERG	100	84.000	Chrysemys_picta_bellii
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSCANG00000040826	RERG	100	82.000	Colobus_angolensis_palliatus
ENSSDUG00000014082	si:cabz01085950.1	100	96.500	ENSCSEG00000015770	si:cabz01085950.1	100	96.500	Cynoglossus_semilaevis
ENSSDUG00000014082	si:cabz01085950.1	100	97.500	ENSCVAG00000006083	si:cabz01085950.1	100	97.500	Cyprinodon_variegatus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSDNOG00000043703	RERG	100	82.500	Dasypus_novemcinctus
ENSSDUG00000014082	si:cabz01085950.1	100	79.000	ENSETEG00000010802	RERG	100	79.000	Echinops_telfairi
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSEASG00005014613	RERG	100	82.500	Equus_asinus_asinus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSECAG00000014358	RERG	100	82.500	Equus_caballus
ENSSDUG00000014082	si:cabz01085950.1	100	94.000	ENSELUG00000013666	si:cabz01085950.1	100	94.000	Esox_lucius
ENSSDUG00000014082	si:cabz01085950.1	100	83.500	ENSFCAG00000029875	RERG	100	83.500	Felis_catus
ENSSDUG00000014082	si:cabz01085950.1	100	80.597	ENSFDAG00000007662	RERG	100	80.597	Fukomys_damarensis
ENSSDUG00000014082	si:cabz01085950.1	100	96.500	ENSFHEG00000016504	si:cabz01085950.1	100	96.500	Fundulus_heteroclitus
ENSSDUG00000014082	si:cabz01085950.1	100	84.000	ENSGALG00000028186	RERG	100	84.000	Gallus_gallus
ENSSDUG00000014082	si:cabz01085950.1	100	97.000	ENSGACG00000019134	si:cabz01085950.1	100	97.000	Gasterosteus_aculeatus
ENSSDUG00000014082	si:cabz01085950.1	100	83.500	ENSGAGG00000021838	RERG	100	83.500	Gopherus_agassizii
ENSSDUG00000014082	si:cabz01085950.1	100	97.500	ENSHBUG00000011397	si:cabz01085950.1	100	97.500	Haplochromis_burtoni
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSHGLG00000018663	RERG	100	82.000	Heterocephalus_glaber_female
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSHGLG00100003290	RERG	100	82.000	Heterocephalus_glaber_male
ENSSDUG00000014082	si:cabz01085950.1	100	86.207	ENSIPUG00000005254	RERG	100	86.207	Ictalurus_punctatus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSSTOG00000023505	RERG	100	82.500	Ictidomys_tridecemlineatus
ENSSDUG00000014082	si:cabz01085950.1	100	93.500	ENSKMAG00000003080	si:cabz01085950.1	100	93.500	Kryptolebias_marmoratus
ENSSDUG00000014082	si:cabz01085950.1	100	97.500	ENSLBEG00000027628	si:cabz01085950.1	100	97.500	Labrus_bergylta
ENSSDUG00000014082	si:cabz01085950.1	100	85.500	ENSLOCG00000016464	si:cabz01085950.1	100	85.500	Lepisosteus_oculatus
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSLAFG00000001217	RERG	100	82.000	Loxodonta_africana
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSMFAG00000041631	RERG	100	82.000	Macaca_fascicularis
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSMMUG00000010460	RERG	100	82.000	Macaca_mulatta
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSMNEG00000042410	RERG	100	82.000	Macaca_nemestrina
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSMLEG00000043731	RERG	100	82.000	Mandrillus_leucophaeus
ENSSDUG00000014082	si:cabz01085950.1	100	98.000	ENSMAMG00000001320	si:cabz01085950.1	85	98.000	Mastacembelus_armatus
ENSSDUG00000014082	si:cabz01085950.1	100	97.500	ENSMZEG00005018287	si:cabz01085950.1	100	97.500	Maylandia_zebra
ENSSDUG00000014082	si:cabz01085950.1	100	84.000	ENSMGAG00000013542	RERG	100	84.000	Meleagris_gallopavo
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSMICG00000006266	RERG	100	82.000	Microcebus_murinus
ENSSDUG00000014082	si:cabz01085950.1	100	98.000	ENSMMOG00000006335	si:cabz01085950.1	100	98.000	Mola_mola
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSMPUG00000011559	RERG	100	82.500	Mustela_putorius_furo
ENSSDUG00000014082	si:cabz01085950.1	100	81.500	ENSNGAG00000000037	Rerg	100	81.500	Nannospalax_galili
ENSSDUG00000014082	si:cabz01085950.1	100	71.500	ENSNLEG00000029492	RERG	100	71.500	Nomascus_leucogenys
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSOPRG00000015124	RERG	100	82.000	Ochotona_princeps
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSODEG00000009994	RERG	100	82.000	Octodon_degus
ENSSDUG00000014082	si:cabz01085950.1	100	97.500	ENSONIG00000009978	si:cabz01085950.1	100	97.500	Oreochromis_niloticus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSOCUG00000000650	RERG	100	82.500	Oryctolagus_cuniculus
ENSSDUG00000014082	si:cabz01085950.1	100	97.000	ENSORLG00020005258	rerg	100	97.000	Oryzias_latipes_hni
ENSSDUG00000014082	si:cabz01085950.1	100	97.000	ENSORLG00015002284	rerg	100	97.000	Oryzias_latipes_hsok
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSOARG00000020676	RERG	100	82.500	Ovis_aries
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSPPAG00000004422	RERG	100	82.500	Pan_paniscus
ENSSDUG00000014082	si:cabz01085950.1	100	83.500	ENSPPRG00000003131	RERG	100	83.500	Panthera_pardus
ENSSDUG00000014082	si:cabz01085950.1	100	83.500	ENSPTIG00000008594	RERG	100	83.500	Panthera_tigris_altaica
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSPTRG00000004731	RERG	100	82.500	Pan_troglodytes
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSPANG00000005456	RERG	100	82.000	Papio_anubis
ENSSDUG00000014082	si:cabz01085950.1	100	83.500	ENSPKIG00000002719	si:cabz01085950.1	100	83.500	Paramormyrops_kingsleyae
ENSSDUG00000014082	si:cabz01085950.1	100	84.500	ENSPSIG00000003221	RERG	100	84.500	Pelodiscus_sinensis
ENSSDUG00000014082	si:cabz01085950.1	100	94.500	ENSPMGG00000004104	si:cabz01085950.1	100	94.500	Periophthalmus_magnuspinnatus
ENSSDUG00000014082	si:cabz01085950.1	100	68.812	ENSPMAG00000006671	si:cabz01085950.1	100	68.812	Petromyzon_marinus
ENSSDUG00000014082	si:cabz01085950.1	100	96.500	ENSPFOG00000008678	si:cabz01085950.1	100	96.500	Poecilia_formosa
ENSSDUG00000014082	si:cabz01085950.1	100	96.500	ENSPMEG00000011210	si:cabz01085950.1	100	96.500	Poecilia_mexicana
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSPPYG00000004331	RERG	100	82.000	Pongo_abelii
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSPVAG00000013319	RERG	100	82.500	Pteropus_vampyrus
ENSSDUG00000014082	si:cabz01085950.1	100	87.685	ENSPNAG00000028497	si:cabz01085950.1	100	87.685	Pygocentrus_nattereri
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSRBIG00000036581	RERG	100	82.000	Rhinopithecus_bieti
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSRROG00000042897	RERG	100	82.000	Rhinopithecus_roxellana
ENSSDUG00000014082	si:cabz01085950.1	100	83.000	ENSSBOG00000034195	RERG	100	83.000	Saimiri_boliviensis_boliviensis
ENSSDUG00000014082	si:cabz01085950.1	100	99.000	ENSSMAG00000014329	si:cabz01085950.1	100	99.000	Scophthalmus_maximus
ENSSDUG00000014082	si:cabz01085950.1	100	99.500	ENSSLDG00000013333	si:cabz01085950.1	100	99.500	Seriola_lalandi_dorsalis
ENSSDUG00000014082	si:cabz01085950.1	100	99.500	ENSSPAG00000018992	si:cabz01085950.1	100	99.500	Stegastes_partitus
ENSSDUG00000014082	si:cabz01085950.1	100	96.000	ENSTRUG00000023011	rerg	100	96.000	Takifugu_rubripes
ENSSDUG00000014082	si:cabz01085950.1	65	97.692	ENSTNIG00000006917	si:cabz01085950.1	100	97.692	Tetraodon_nigroviridis
ENSSDUG00000014082	si:cabz01085950.1	100	82.000	ENSTTRG00000015290	RERG	100	82.000	Tursiops_truncatus
ENSSDUG00000014082	si:cabz01085950.1	100	83.000	ENSUAMG00000010578	RERG	100	83.000	Ursus_americanus
ENSSDUG00000014082	si:cabz01085950.1	100	83.000	ENSUMAG00000002671	RERG	100	83.000	Ursus_maritimus
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSVPAG00000002449	RERG	100	82.500	Vicugna_pacos
ENSSDUG00000014082	si:cabz01085950.1	100	82.500	ENSVVUG00000004380	RERG	100	82.500	Vulpes_vulpes
ENSSDUG00000014082	si:cabz01085950.1	100	78.500	ENSXETG00000022517	rerg	100	78.500	Xenopus_tropicalis
ENSSDUG00000014082	si:cabz01085950.1	100	97.000	ENSXMAG00000024024	si:cabz01085950.1	100	97.000	Xiphophorus_maculatus