EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000014161 (Gene tree)
Gene ID: 111217177
Gene Symbol: exosc8
Alias: Opa-interacting protein 2 (3' exoribonuclease family)|wu:fb79a10|zgc:110381
Full Name: exosome component 8
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4764 bases
Position: chrBDQW01000040.1:2751005-2755768
Accession: 111217177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019429	RNase_PH	PF01138.21	4.1e-28	1	1
ENSSDUP00000019429	RNase_PH_C	PF03725.15	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000019776	-	2407	XM_022738935	ENSSDUP00000019429	277 (aa)	XP_022594656	UPI000BBE823E

Gene Model

Click here to download ENSSDUG00000014161's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014161	exosc8	99	73.723	ENSG00000120699	EXOSC8	96	83.333	Homo_sapiens
ENSSDUG00000014161	exosc8	94	80.345	ENSAPOG00000002211	exosc8	95	80.345	Acanthochromis_polyacanthus
ENSSDUG00000014161	exosc8	99	73.455	ENSAMEG00000015762	EXOSC8	99	73.455	Ailuropoda_melanoleuca
ENSSDUG00000014161	exosc8	100	85.199	ENSACIG00000023510	exosc8	100	85.199	Amphilophus_citrinellus
ENSSDUG00000014161	exosc8	98	89.706	ENSAOCG00000015357	exosc8	100	83.333	Amphiprion_ocellaris
ENSSDUG00000014161	exosc8	100	81.588	ENSAPEG00000020401	exosc8	100	81.588	Amphiprion_percula
ENSSDUG00000014161	exosc8	100	88.087	ENSATEG00000002924	exosc8	100	88.087	Anabas_testudineus
ENSSDUG00000014161	exosc8	99	72.727	ENSAPLG00000007895	EXOSC8	89	72.727	Anas_platyrhynchos
ENSSDUG00000014161	exosc8	99	71.062	ENSACAG00000017648	EXOSC8	98	71.062	Anolis_carolinensis
ENSSDUG00000014161	exosc8	99	73.358	ENSANAG00000028910	EXOSC8	99	73.358	Aotus_nancymaae
ENSSDUG00000014161	exosc8	100	87.365	ENSACLG00000002981	exosc8	100	87.365	Astatotilapia_calliptera
ENSSDUG00000014161	exosc8	100	74.368	ENSAMXG00000016238	exosc8	100	74.368	Astyanax_mexicanus
ENSSDUG00000014161	exosc8	56	33.333	ENSAMXG00000035439	exosc7	53	33.333	Astyanax_mexicanus
ENSSDUG00000014161	exosc8	99	72.263	ENSBTAG00000011855	EXOSC8	99	72.263	Bos_taurus
ENSSDUG00000014161	exosc8	99	73.723	ENSCJAG00000018078	EXOSC8	99	73.723	Callithrix_jacchus
ENSSDUG00000014161	exosc8	99	74.453	ENSCAFG00000006115	EXOSC8	99	74.453	Canis_familiaris
ENSSDUG00000014161	exosc8	98	73.063	ENSCAFG00020021481	EXOSC8	85	73.063	Canis_lupus_dingo
ENSSDUG00000014161	exosc8	97	70.370	ENSCHIG00000008153	EXOSC8	98	70.370	Capra_hircus
ENSSDUG00000014161	exosc8	99	73.723	ENSTSYG00000013226	EXOSC8	99	73.723	Carlito_syrichta
ENSSDUG00000014161	exosc8	83	30.833	ENSCAPG00000016467	EXOSC7	74	30.833	Cavia_aperea
ENSSDUG00000014161	exosc8	99	74.088	ENSCPOG00000004450	EXOSC8	99	74.088	Cavia_porcellus
ENSSDUG00000014161	exosc8	99	73.723	ENSCCAG00000023491	EXOSC8	99	73.723	Cebus_capucinus
ENSSDUG00000014161	exosc8	99	73.723	ENSCATG00000040502	EXOSC8	99	73.723	Cercocebus_atys
ENSSDUG00000014161	exosc8	99	73.626	ENSCLAG00000003456	EXOSC8	99	73.626	Chinchilla_lanigera
ENSSDUG00000014161	exosc8	99	73.723	ENSCSAG00000017867	EXOSC8	99	73.723	Chlorocebus_sabaeus
ENSSDUG00000014161	exosc8	97	74.254	ENSCHOG00000009005	EXOSC8	99	74.254	Choloepus_hoffmanni
ENSSDUG00000014161	exosc8	99	74.453	ENSCPBG00000003168	EXOSC8	99	74.453	Chrysemys_picta_bellii
ENSSDUG00000014161	exosc8	97	52.045	ENSCING00000004231	-	96	52.045	Ciona_intestinalis
ENSSDUG00000014161	exosc8	97	48.327	ENSCSAVG00000002321	-	99	48.327	Ciona_savignyi
ENSSDUG00000014161	exosc8	99	73.723	ENSCANG00000040247	EXOSC8	99	73.723	Colobus_angolensis_palliatus
ENSSDUG00000014161	exosc8	99	71.898	ENSCGRG00001012262	Exosc8	99	71.898	Cricetulus_griseus_chok1gshd
ENSSDUG00000014161	exosc8	97	71.269	ENSCGRG00000003184	Exosc8	99	71.269	Cricetulus_griseus_crigri
ENSSDUG00000014161	exosc8	99	85.348	ENSCSEG00000019201	exosc8	99	85.348	Cynoglossus_semilaevis
ENSSDUG00000014161	exosc8	94	85.057	ENSCVAG00000010277	exosc8	96	84.388	Cyprinodon_variegatus
ENSSDUG00000014161	exosc8	100	76.895	ENSDARG00000068755	exosc8	100	76.895	Danio_rerio
ENSSDUG00000014161	exosc8	60	30.357	ENSDARG00000006392	exosc9	69	30.357	Danio_rerio
ENSSDUG00000014161	exosc8	99	72.993	ENSDNOG00000019133	EXOSC8	91	72.993	Dasypus_novemcinctus
ENSSDUG00000014161	exosc8	99	74.088	ENSDORG00000011062	Exosc8	99	74.088	Dipodomys_ordii
ENSSDUG00000014161	exosc8	99	51.095	ENSETEG00000003498	EXOSC8	99	51.095	Echinops_telfairi
ENSSDUG00000014161	exosc8	57	67.296	ENSEBUG00000008140	exosc8	77	67.296	Eptatretus_burgeri
ENSSDUG00000014161	exosc8	97	72.963	ENSEASG00005019832	EXOSC8	98	72.963	Equus_asinus_asinus
ENSSDUG00000014161	exosc8	99	73.723	ENSECAG00000012606	EXOSC8	99	73.723	Equus_caballus
ENSSDUG00000014161	exosc8	97	64.179	ENSEEUG00000000433	EXOSC8	99	64.179	Erinaceus_europaeus
ENSSDUG00000014161	exosc8	100	80.144	ENSELUG00000008648	exosc8	100	80.144	Esox_lucius
ENSSDUG00000014161	exosc8	99	74.453	ENSFCAG00000003815	EXOSC8	99	74.453	Felis_catus
ENSSDUG00000014161	exosc8	96	72.285	ENSFALG00000008262	EXOSC8	83	72.285	Ficedula_albicollis
ENSSDUG00000014161	exosc8	91	30.075	ENSFALG00000002600	EXOSC7	88	30.075	Ficedula_albicollis
ENSSDUG00000014161	exosc8	99	74.545	ENSFDAG00000000161	EXOSC8	83	74.545	Fukomys_damarensis
ENSSDUG00000014161	exosc8	100	86.643	ENSFHEG00000001409	exosc8	100	86.643	Fundulus_heteroclitus
ENSSDUG00000014161	exosc8	100	80.144	ENSGMOG00000012314	exosc8	100	80.144	Gadus_morhua
ENSSDUG00000014161	exosc8	91	30.075	ENSGALG00000030084	EXOSC7	88	30.075	Gallus_gallus
ENSSDUG00000014161	exosc8	99	72.993	ENSGALG00000017048	EXOSC8	99	72.993	Gallus_gallus
ENSSDUG00000014161	exosc8	100	84.946	ENSGAFG00000020868	exosc8	100	84.946	Gambusia_affinis
ENSSDUG00000014161	exosc8	100	85.921	ENSGACG00000020564	exosc8	100	85.921	Gasterosteus_aculeatus
ENSSDUG00000014161	exosc8	76	70.476	ENSGAGG00000006811	EXOSC8	96	70.476	Gopherus_agassizii
ENSSDUG00000014161	exosc8	99	73.358	ENSGGOG00000011902	EXOSC8	99	73.358	Gorilla_gorilla
ENSSDUG00000014161	exosc8	98	87.085	ENSHBUG00000006959	exosc8	99	87.085	Haplochromis_burtoni
ENSSDUG00000014161	exosc8	99	73.723	ENSHGLG00000002963	EXOSC8	99	73.723	Heterocephalus_glaber_female
ENSSDUG00000014161	exosc8	99	73.723	ENSHGLG00100011167	-	99	73.723	Heterocephalus_glaber_male
ENSSDUG00000014161	exosc8	99	78.388	ENSHCOG00000011740	exosc8	99	78.388	Hippocampus_comes
ENSSDUG00000014161	exosc8	100	75.451	ENSIPUG00000009497	exosc8	86	75.451	Ictalurus_punctatus
ENSSDUG00000014161	exosc8	86	30.041	ENSIPUG00000012381	exosc7	83	30.041	Ictalurus_punctatus
ENSSDUG00000014161	exosc8	99	48.540	ENSSTOG00000033940	-	96	48.540	Ictidomys_tridecemlineatus
ENSSDUG00000014161	exosc8	99	71.898	ENSJJAG00000010023	-	99	71.898	Jaculus_jaculus
ENSSDUG00000014161	exosc8	97	72.388	ENSJJAG00000022752	-	99	72.388	Jaculus_jaculus
ENSSDUG00000014161	exosc8	100	88.809	ENSKMAG00000005249	exosc8	100	88.809	Kryptolebias_marmoratus
ENSSDUG00000014161	exosc8	99	88.278	ENSLBEG00000020568	exosc8	95	86.920	Labrus_bergylta
ENSSDUG00000014161	exosc8	86	74.790	ENSLACG00000009536	EXOSC8	98	74.790	Latimeria_chalumnae
ENSSDUG00000014161	exosc8	84	30.579	ENSLOCG00000002116	exosc7	81	30.579	Lepisosteus_oculatus
ENSSDUG00000014161	exosc8	99	71.739	ENSLOCG00000008503	exosc8	99	71.739	Lepisosteus_oculatus
ENSSDUG00000014161	exosc8	99	74.453	ENSLAFG00000014242	EXOSC8	99	74.453	Loxodonta_africana
ENSSDUG00000014161	exosc8	99	73.723	ENSMFAG00000027794	EXOSC8	99	73.723	Macaca_fascicularis
ENSSDUG00000014161	exosc8	99	73.723	ENSMMUG00000003588	EXOSC8	96	83.333	Macaca_mulatta
ENSSDUG00000014161	exosc8	99	73.723	ENSMNEG00000032970	EXOSC8	99	73.723	Macaca_nemestrina
ENSSDUG00000014161	exosc8	97	70.000	ENSMLEG00000040861	EXOSC8	98	70.000	Mandrillus_leucophaeus
ENSSDUG00000014161	exosc8	100	87.726	ENSMAMG00000014077	exosc8	100	87.726	Mastacembelus_armatus
ENSSDUG00000014161	exosc8	100	87.365	ENSMZEG00005024472	exosc8	100	87.365	Maylandia_zebra
ENSSDUG00000014161	exosc8	97	72.325	ENSMGAG00000015057	EXOSC8	98	72.325	Meleagris_gallopavo
ENSSDUG00000014161	exosc8	91	30.075	ENSMGAG00000011656	EXOSC7	88	30.075	Meleagris_gallopavo
ENSSDUG00000014161	exosc8	84	68.803	ENSMAUG00000017812	Exosc8	97	68.803	Mesocricetus_auratus
ENSSDUG00000014161	exosc8	99	73.358	ENSMICG00000003353	EXOSC8	99	73.358	Microcebus_murinus
ENSSDUG00000014161	exosc8	85	69.362	ENSMOCG00000017293	Exosc8	94	69.362	Microtus_ochrogaster
ENSSDUG00000014161	exosc8	81	85.650	ENSMMOG00000010530	exosc8	100	85.650	Mola_mola
ENSSDUG00000014161	exosc8	99	72.628	ENSMODG00000010052	EXOSC8	99	72.628	Monodelphis_domestica
ENSSDUG00000014161	exosc8	95	88.931	ENSMALG00000010744	exosc8	100	88.846	Monopterus_albus
ENSSDUG00000014161	exosc8	99	71.168	MGP_CAROLIEiJ_G0024992	Exosc8	100	76.923	Mus_caroli
ENSSDUG00000014161	exosc8	99	71.168	ENSMUSG00000027752	Exosc8	100	76.923	Mus_musculus
ENSSDUG00000014161	exosc8	99	72.263	MGP_PahariEiJ_G0026433	Exosc8	100	79.231	Mus_pahari
ENSSDUG00000014161	exosc8	99	71.533	MGP_SPRETEiJ_G0025927	Exosc8	100	76.923	Mus_spretus
ENSSDUG00000014161	exosc8	99	74.453	ENSMPUG00000001833	EXOSC8	99	74.453	Mustela_putorius_furo
ENSSDUG00000014161	exosc8	98	71.533	ENSNGAG00000020518	Exosc8	99	72.285	Nannospalax_galili
ENSSDUG00000014161	exosc8	100	77.352	ENSNBRG00000012967	exosc8	100	77.352	Neolamprologus_brichardi
ENSSDUG00000014161	exosc8	99	74.453	ENSNLEG00000001745	EXOSC8	99	74.453	Nomascus_leucogenys
ENSSDUG00000014161	exosc8	99	70.073	ENSMEUG00000008050	EXOSC8	99	70.073	Notamacropus_eugenii
ENSSDUG00000014161	exosc8	99	70.438	ENSOPRG00000004966	EXOSC8	99	70.438	Ochotona_princeps
ENSSDUG00000014161	exosc8	96	70.301	ENSODEG00000003316	-	97	70.301	Octodon_degus
ENSSDUG00000014161	exosc8	99	63.139	ENSODEG00000017401	-	99	63.139	Octodon_degus
ENSSDUG00000014161	exosc8	99	73.358	ENSODEG00000009230	-	99	73.358	Octodon_degus
ENSSDUG00000014161	exosc8	99	66.788	ENSODEG00000014890	-	99	66.788	Octodon_degus
ENSSDUG00000014161	exosc8	100	86.643	ENSONIG00000012607	exosc8	100	86.643	Oreochromis_niloticus
ENSSDUG00000014161	exosc8	99	71.168	ENSOANG00000015500	EXOSC8	90	71.168	Ornithorhynchus_anatinus
ENSSDUG00000014161	exosc8	99	74.453	ENSOCUG00000007465	EXOSC8	99	74.453	Oryctolagus_cuniculus
ENSSDUG00000014161	exosc8	100	84.477	ENSORLG00000004025	exosc8	100	84.477	Oryzias_latipes
ENSSDUG00000014161	exosc8	100	83.755	ENSORLG00020013129	exosc8	100	83.755	Oryzias_latipes_hni
ENSSDUG00000014161	exosc8	100	84.477	ENSORLG00015019052	exosc8	100	84.477	Oryzias_latipes_hsok
ENSSDUG00000014161	exosc8	100	83.394	ENSOMEG00000013266	exosc8	100	83.394	Oryzias_melastigma
ENSSDUG00000014161	exosc8	99	72.263	ENSOGAG00000002745	EXOSC8	99	72.263	Otolemur_garnettii
ENSSDUG00000014161	exosc8	99	71.168	ENSOARG00000010229	EXOSC8	99	71.168	Ovis_aries
ENSSDUG00000014161	exosc8	99	73.723	ENSPPAG00000027267	EXOSC8	99	73.723	Pan_paniscus
ENSSDUG00000014161	exosc8	96	55.639	ENSPPRG00000022630	-	98	54.887	Panthera_pardus
ENSSDUG00000014161	exosc8	99	74.453	ENSPPRG00000022901	-	99	74.453	Panthera_pardus
ENSSDUG00000014161	exosc8	99	72.993	ENSPTIG00000001519	EXOSC8	99	72.993	Panthera_tigris_altaica
ENSSDUG00000014161	exosc8	99	73.723	ENSPTRG00000005790	EXOSC8	99	73.723	Pan_troglodytes
ENSSDUG00000014161	exosc8	99	73.723	ENSPANG00000019344	EXOSC8	99	73.723	Papio_anubis
ENSSDUG00000014161	exosc8	85	72.340	ENSPKIG00000023257	exosc8	96	72.340	Paramormyrops_kingsleyae
ENSSDUG00000014161	exosc8	99	74.453	ENSPSIG00000002406	EXOSC8	100	74.453	Pelodiscus_sinensis
ENSSDUG00000014161	exosc8	100	80.144	ENSPMGG00000018185	exosc8	100	80.144	Periophthalmus_magnuspinnatus
ENSSDUG00000014161	exosc8	99	71.898	ENSPEMG00000010801	Exosc8	99	71.898	Peromyscus_maniculatus_bairdii
ENSSDUG00000014161	exosc8	99	65.934	ENSPMAG00000004395	exosc8	98	65.934	Petromyzon_marinus
ENSSDUG00000014161	exosc8	99	72.263	ENSPCIG00000021634	EXOSC8	99	72.263	Phascolarctos_cinereus
ENSSDUG00000014161	exosc8	56	31.169	ENSPLAG00000016410	exosc7	55	31.169	Poecilia_latipinna
ENSSDUG00000014161	exosc8	99	86.813	ENSPLAG00000020762	exosc8	97	87.778	Poecilia_latipinna
ENSSDUG00000014161	exosc8	100	88.087	ENSPMEG00000000980	exosc8	100	88.087	Poecilia_mexicana
ENSSDUG00000014161	exosc8	69	81.675	ENSPMEG00000023498	-	85	81.675	Poecilia_mexicana
ENSSDUG00000014161	exosc8	100	84.588	ENSPREG00000011598	exosc8	100	84.588	Poecilia_reticulata
ENSSDUG00000014161	exosc8	99	72.628	ENSPPYG00000005287	EXOSC8	99	72.628	Pongo_abelii
ENSSDUG00000014161	exosc8	84	56.838	ENSPCAG00000014966	EXOSC8	85	56.838	Procavia_capensis
ENSSDUG00000014161	exosc8	99	73.358	ENSPCOG00000018867	EXOSC8	99	73.358	Propithecus_coquereli
ENSSDUG00000014161	exosc8	99	74.359	ENSPVAG00000014610	EXOSC8	99	74.359	Pteropus_vampyrus
ENSSDUG00000014161	exosc8	95	77.855	ENSPNYG00000013016	exosc8	97	77.855	Pundamilia_nyererei
ENSSDUG00000014161	exosc8	100	74.368	ENSPNAG00000020509	exosc8	100	74.368	Pygocentrus_nattereri
ENSSDUG00000014161	exosc8	85	69.787	ENSRNOG00000051623	Exosc8	97	69.787	Rattus_norvegicus
ENSSDUG00000014161	exosc8	99	73.358	ENSRBIG00000027590	EXOSC8	99	73.358	Rhinopithecus_bieti
ENSSDUG00000014161	exosc8	99	69.343	ENSRROG00000026332	-	99	69.343	Rhinopithecus_roxellana
ENSSDUG00000014161	exosc8	99	73.358	ENSRROG00000022383	-	99	73.358	Rhinopithecus_roxellana
ENSSDUG00000014161	exosc8	99	73.723	ENSSBOG00000004631	EXOSC8	99	73.723	Saimiri_boliviensis_boliviensis
ENSSDUG00000014161	exosc8	99	73.723	ENSSHAG00000005532	EXOSC8	99	73.723	Sarcophilus_harrisii
ENSSDUG00000014161	exosc8	100	75.812	ENSSFOG00015005651	exosc8	100	75.812	Scleropages_formosus
ENSSDUG00000014161	exosc8	100	88.087	ENSSMAG00000018819	exosc8	100	88.087	Scophthalmus_maximus
ENSSDUG00000014161	exosc8	98	98.529	ENSSLDG00000023126	exosc8	96	98.529	Seriola_lalandi_dorsalis
ENSSDUG00000014161	exosc8	56	33.333	ENSSLDG00000024102	exosc7	51	33.333	Seriola_lalandi_dorsalis
ENSSDUG00000014161	exosc8	99	69.343	ENSSARG00000013914	EXOSC8	99	69.343	Sorex_araneus
ENSSDUG00000014161	exosc8	92	69.531	ENSSPUG00000016825	EXOSC8	99	69.531	Sphenodon_punctatus
ENSSDUG00000014161	exosc8	100	91.697	ENSSPAG00000003434	exosc8	100	91.697	Stegastes_partitus
ENSSDUG00000014161	exosc8	97	70.370	ENSSSCG00000009358	EXOSC8	85	70.370	Sus_scrofa
ENSSDUG00000014161	exosc8	96	71.747	ENSTGUG00000011908	EXOSC8	99	71.747	Taeniopygia_guttata
ENSSDUG00000014161	exosc8	99	81.159	ENSTRUG00000001657	exosc8	100	81.159	Takifugu_rubripes
ENSSDUG00000014161	exosc8	100	82.310	ENSTNIG00000009927	exosc8	100	82.310	Tetraodon_nigroviridis
ENSSDUG00000014161	exosc8	96	48.496	ENSTBEG00000000079	-	99	48.496	Tupaia_belangeri
ENSSDUG00000014161	exosc8	99	73.358	ENSTBEG00000012040	EXOSC8	99	73.358	Tupaia_belangeri
ENSSDUG00000014161	exosc8	97	69.259	ENSTTRG00000007906	EXOSC8	99	69.259	Tursiops_truncatus
ENSSDUG00000014161	exosc8	96	73.684	ENSUAMG00000000695	EXOSC8	92	73.684	Ursus_americanus
ENSSDUG00000014161	exosc8	99	73.818	ENSUMAG00000024024	EXOSC8	99	73.818	Ursus_maritimus
ENSSDUG00000014161	exosc8	99	64.234	ENSVPAG00000007287	EXOSC8	99	64.234	Vicugna_pacos
ENSSDUG00000014161	exosc8	99	74.818	ENSVVUG00000026660	EXOSC8	97	73.704	Vulpes_vulpes
ENSSDUG00000014161	exosc8	99	66.909	ENSXETG00000001819	exosc8	99	66.909	Xenopus_tropicalis
ENSSDUG00000014161	exosc8	99	83.883	ENSXCOG00000010128	exosc8	97	83.883	Xiphophorus_couchianus
ENSSDUG00000014161	exosc8	100	87.726	ENSXMAG00000008621	exosc8	100	87.726	Xiphophorus_maculatus