EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014276 (Gene tree)
Gene ID: 111218416
Gene Symbol: wdr3
Alias: sb:cb42|wu:fb92b07
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 13072 bases
Position: chrBDQW01000052.1:20655922-20668993
Accession: 111218416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019677	Utp12	PF04003.12	5.9e-19	1	1
ENSSDUP00000019632	Utp12	PF04003.12	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020026	-	2793	-	ENSSDUP00000019677	930 (aa)	-	-
ENSSDUT00000019981	-	4405	XM_022740712	ENSSDUP00000019632	941 (aa)	XP_022596433	UPI000BBEF5B9

Gene Model

Click here to download ENSSDUG00000014276's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014276	wdr3	58	30.769	ENSSDUG00000019036	-	94	30.769
ENSSDUG00000014276	wdr3	52	31.293	ENSSDUG00000022792	utp15	60	31.293
ENSSDUG00000014276	wdr3	53	31.308	ENSSDUG00000008158	tbl3	61	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014276	wdr3	99	70.869	ENSG00000065183	WDR3	98	70.996	Homo_sapiens
ENSSDUG00000014276	wdr3	100	87.248	ENSAPOG00000005975	wdr3	99	92.022	Acanthochromis_polyacanthus
ENSSDUG00000014276	wdr3	99	70.095	ENSAMEG00000004339	WDR3	98	70.130	Ailuropoda_melanoleuca
ENSSDUG00000014276	wdr3	100	69.710	ENSACIG00000006993	wdr3	100	77.955	Amphilophus_citrinellus
ENSSDUG00000014276	wdr3	100	90.117	ENSAOCG00000023966	wdr3	99	91.461	Amphiprion_ocellaris
ENSSDUG00000014276	wdr3	100	91.817	ENSAPEG00000018223	wdr3	100	91.817	Amphiprion_percula
ENSSDUG00000014276	wdr3	100	93.411	ENSATEG00000000703	wdr3	100	93.411	Anabas_testudineus
ENSSDUG00000014276	wdr3	98	65.517	ENSACAG00000008210	WDR3	98	65.801	Anolis_carolinensis
ENSSDUG00000014276	wdr3	100	70.688	ENSANAG00000033348	WDR3	98	70.887	Aotus_nancymaae
ENSSDUG00000014276	wdr3	100	92.349	ENSACLG00000016975	wdr3	100	92.349	Astatotilapia_calliptera
ENSSDUG00000014276	wdr3	99	82.147	ENSAMXG00000005755	wdr3	99	82.040	Astyanax_mexicanus
ENSSDUG00000014276	wdr3	99	70.233	ENSBTAG00000019937	WDR3	99	70.233	Bos_taurus
ENSSDUG00000014276	wdr3	100	35.924	WBGene00017435	F13H8.2	97	35.851	Caenorhabditis_elegans
ENSSDUG00000014276	wdr3	100	70.265	ENSCJAG00000005749	WDR3	98	70.455	Callithrix_jacchus
ENSSDUG00000014276	wdr3	99	70.201	ENSCAFG00000009916	WDR3	98	70.346	Canis_familiaris
ENSSDUG00000014276	wdr3	96	70.744	ENSCAFG00020020610	WDR3	93	71.207	Canis_lupus_dingo
ENSSDUG00000014276	wdr3	99	70.551	ENSCHIG00000010490	WDR3	99	70.551	Capra_hircus
ENSSDUG00000014276	wdr3	99	70.644	ENSTSYG00000002158	WDR3	98	70.410	Carlito_syrichta
ENSSDUG00000014276	wdr3	100	56.946	ENSCAPG00000015805	WDR3	100	52.292	Cavia_aperea
ENSSDUG00000014276	wdr3	99	70.233	ENSCPOG00000011305	WDR3	99	70.233	Cavia_porcellus
ENSSDUG00000014276	wdr3	100	70.657	ENSCCAG00000037237	WDR3	98	70.856	Cebus_capucinus
ENSSDUG00000014276	wdr3	99	70.763	ENSCATG00000037200	WDR3	98	70.887	Cercocebus_atys
ENSSDUG00000014276	wdr3	99	70.233	ENSCLAG00000010657	WDR3	99	70.233	Chinchilla_lanigera
ENSSDUG00000014276	wdr3	99	70.551	ENSCSAG00000001705	WDR3	98	70.671	Chlorocebus_sabaeus
ENSSDUG00000014276	wdr3	81	72.857	ENSCHOG00000006428	WDR3	83	72.857	Choloepus_hoffmanni
ENSSDUG00000014276	wdr3	98	70.842	ENSCPBG00000001426	WDR3	98	70.748	Chrysemys_picta_bellii
ENSSDUG00000014276	wdr3	99	68.823	ENSCGRG00001019544	Wdr3	99	69.035	Cricetulus_griseus_chok1gshd
ENSSDUG00000014276	wdr3	87	67.101	ENSCGRG00000001027	Wdr3	88	67.427	Cricetulus_griseus_crigri
ENSSDUG00000014276	wdr3	100	89.798	ENSCSEG00000009381	wdr3	100	89.586	Cynoglossus_semilaevis
ENSSDUG00000014276	wdr3	100	84.607	ENSCVAG00000014846	wdr3	100	84.395	Cyprinodon_variegatus
ENSSDUG00000014276	wdr3	99	82.147	ENSDARG00000011079	wdr3	99	82.040	Danio_rerio
ENSSDUG00000014276	wdr3	99	70.233	ENSDNOG00000018114	WDR3	98	70.346	Dasypus_novemcinctus
ENSSDUG00000014276	wdr3	99	69.538	ENSDORG00000011031	Wdr3	99	68.896	Dipodomys_ordii
ENSSDUG00000014276	wdr3	98	43.703	FBgn0038597	CG8064	98	43.502	Drosophila_melanogaster
ENSSDUG00000014276	wdr3	99	70.021	ENSEASG00005006393	WDR3	98	70.238	Equus_asinus_asinus
ENSSDUG00000014276	wdr3	99	70.021	ENSECAG00000006575	WDR3	96	70.238	Equus_caballus
ENSSDUG00000014276	wdr3	95	70.628	ENSEEUG00000002218	WDR3	100	70.628	Erinaceus_europaeus
ENSSDUG00000014276	wdr3	99	82.678	ENSELUG00000005997	wdr3	99	83.103	Esox_lucius
ENSSDUG00000014276	wdr3	99	70.732	ENSFCAG00000003469	WDR3	98	70.779	Felis_catus
ENSSDUG00000014276	wdr3	98	68.182	ENSFALG00000005089	WDR3	98	68.182	Ficedula_albicollis
ENSSDUG00000014276	wdr3	99	70.445	ENSFDAG00000016284	WDR3	99	70.233	Fukomys_damarensis
ENSSDUG00000014276	wdr3	100	88.641	ENSFHEG00000012138	wdr3	95	88.641	Fundulus_heteroclitus
ENSSDUG00000014276	wdr3	95	74.393	ENSGMOG00000002962	wdr3	100	74.393	Gadus_morhua
ENSSDUG00000014276	wdr3	98	69.330	ENSGALG00000014791	WDR3	98	69.447	Gallus_gallus
ENSSDUG00000014276	wdr3	100	87.911	ENSGAFG00000013102	wdr3	100	88.123	Gambusia_affinis
ENSSDUG00000014276	wdr3	95	76.909	ENSGACG00000008251	wdr3	100	76.840	Gasterosteus_aculeatus
ENSSDUG00000014276	wdr3	95	71.669	ENSGAGG00000009171	WDR3	96	71.669	Gopherus_agassizii
ENSSDUG00000014276	wdr3	99	70.975	ENSGGOG00000009982	WDR3	98	71.104	Gorilla_gorilla
ENSSDUG00000014276	wdr3	100	92.561	ENSHBUG00000004367	wdr3	100	92.561	Haplochromis_burtoni
ENSSDUG00000014276	wdr3	100	69.841	ENSHGLG00000017936	WDR3	99	69.915	Heterocephalus_glaber_female
ENSSDUG00000014276	wdr3	100	69.841	ENSHGLG00100008292	WDR3	99	69.915	Heterocephalus_glaber_male
ENSSDUG00000014276	wdr3	100	77.443	ENSHCOG00000017501	wdr3	98	83.586	Hippocampus_comes
ENSSDUG00000014276	wdr3	99	81.316	ENSIPUG00000003396	wdr3	99	81.635	Ictalurus_punctatus
ENSSDUG00000014276	wdr3	99	70.339	ENSSTOG00000003504	WDR3	98	70.238	Ictidomys_tridecemlineatus
ENSSDUG00000014276	wdr3	99	69.304	ENSJJAG00000013861	Wdr3	99	69.312	Jaculus_jaculus
ENSSDUG00000014276	wdr3	100	87.856	ENSKMAG00000016004	wdr3	99	89.832	Kryptolebias_marmoratus
ENSSDUG00000014276	wdr3	100	86.296	ENSLBEG00000013757	wdr3	100	86.218	Labrus_bergylta
ENSSDUG00000014276	wdr3	100	65.041	ENSLACG00000014259	WDR3	100	64.865	Latimeria_chalumnae
ENSSDUG00000014276	wdr3	100	75.265	ENSLOCG00000011052	wdr3	100	74.841	Lepisosteus_oculatus
ENSSDUG00000014276	wdr3	99	70.127	ENSLAFG00000012108	WDR3	99	70.021	Loxodonta_africana
ENSSDUG00000014276	wdr3	99	70.763	ENSMFAG00000034570	WDR3	98	70.887	Macaca_fascicularis
ENSSDUG00000014276	wdr3	99	70.657	ENSMMUG00000008513	WDR3	98	70.779	Macaca_mulatta
ENSSDUG00000014276	wdr3	99	70.763	ENSMNEG00000039555	WDR3	98	70.887	Macaca_nemestrina
ENSSDUG00000014276	wdr3	99	70.657	ENSMLEG00000035516	WDR3	98	70.779	Mandrillus_leucophaeus
ENSSDUG00000014276	wdr3	100	87.419	ENSMAMG00000020737	wdr3	100	87.742	Mastacembelus_armatus
ENSSDUG00000014276	wdr3	100	86.335	ENSMZEG00005019253	wdr3	100	86.123	Maylandia_zebra
ENSSDUG00000014276	wdr3	97	65.502	ENSMGAG00000014241	WDR3	97	65.608	Meleagris_gallopavo
ENSSDUG00000014276	wdr3	99	68.823	ENSMAUG00000002574	Wdr3	99	68.823	Mesocricetus_auratus
ENSSDUG00000014276	wdr3	100	70.613	ENSMICG00000001783	WDR3	98	70.250	Microcebus_murinus
ENSSDUG00000014276	wdr3	99	69.492	ENSMOCG00000014361	Wdr3	99	69.386	Microtus_ochrogaster
ENSSDUG00000014276	wdr3	100	83.633	ENSMMOG00000019419	wdr3	100	84.055	Mola_mola
ENSSDUG00000014276	wdr3	100	69.841	ENSMODG00000005243	WDR3	100	69.524	Monodelphis_domestica
ENSSDUG00000014276	wdr3	99	82.385	ENSMALG00000016265	wdr3	99	81.886	Monopterus_albus
ENSSDUG00000014276	wdr3	99	68.856	MGP_CAROLIEiJ_G0025421	Wdr3	99	68.856	Mus_caroli
ENSSDUG00000014276	wdr3	99	69.174	ENSMUSG00000033285	Wdr3	99	69.068	Mus_musculus
ENSSDUG00000014276	wdr3	99	69.068	MGP_PahariEiJ_G0026865	Wdr3	99	68.962	Mus_pahari
ENSSDUG00000014276	wdr3	99	68.750	MGP_SPRETEiJ_G0026371	Wdr3	99	68.644	Mus_spretus
ENSSDUG00000014276	wdr3	99	70.276	ENSMPUG00000001565	WDR3	98	70.423	Mustela_putorius_furo
ENSSDUG00000014276	wdr3	99	70.657	ENSMLUG00000003500	WDR3	98	70.779	Myotis_lucifugus
ENSSDUG00000014276	wdr3	99	69.459	ENSNGAG00000021117	Wdr3	99	69.565	Nannospalax_galili
ENSSDUG00000014276	wdr3	100	81.136	ENSNBRG00000015140	wdr3	100	81.243	Neolamprologus_brichardi
ENSSDUG00000014276	wdr3	99	70.551	ENSNLEG00000005304	WDR3	98	70.671	Nomascus_leucogenys
ENSSDUG00000014276	wdr3	95	84.483	ENSMEUG00000009673	WDR3	78	84.483	Notamacropus_eugenii
ENSSDUG00000014276	wdr3	94	68.932	ENSOPRG00000001857	WDR3	99	63.425	Ochotona_princeps
ENSSDUG00000014276	wdr3	93	70.629	ENSODEG00000000136	WDR3	100	70.629	Octodon_degus
ENSSDUG00000014276	wdr3	100	92.136	ENSONIG00000015678	wdr3	100	92.136	Oreochromis_niloticus
ENSSDUG00000014276	wdr3	98	67.454	ENSOANG00000003070	WDR3	98	68.152	Ornithorhynchus_anatinus
ENSSDUG00000014276	wdr3	99	70.763	ENSOCUG00000007572	WDR3	99	70.763	Oryctolagus_cuniculus
ENSSDUG00000014276	wdr3	100	87.566	ENSORLG00020022391	wdr3	100	87.354	Oryzias_latipes_hni
ENSSDUG00000014276	wdr3	100	87.991	ENSORLG00015023208	wdr3	100	87.779	Oryzias_latipes_hsok
ENSSDUG00000014276	wdr3	100	89.479	ENSOMEG00000017592	wdr3	100	89.479	Oryzias_melastigma
ENSSDUG00000014276	wdr3	99	70.763	ENSOGAG00000007399	WDR3	98	70.887	Otolemur_garnettii
ENSSDUG00000014276	wdr3	99	70.613	ENSOARG00000020325	WDR3	99	70.613	Ovis_aries
ENSSDUG00000014276	wdr3	99	70.975	ENSPPAG00000029068	WDR3	98	71.104	Pan_paniscus
ENSSDUG00000014276	wdr3	99	70.626	ENSPPRG00000022972	WDR3	98	70.671	Panthera_pardus
ENSSDUG00000014276	wdr3	99	70.520	ENSPTIG00000016747	WDR3	98	70.563	Panthera_tigris_altaica
ENSSDUG00000014276	wdr3	99	70.975	ENSPTRG00000001168	WDR3	98	71.104	Pan_troglodytes
ENSSDUG00000014276	wdr3	99	70.763	ENSPANG00000020680	WDR3	98	70.887	Papio_anubis
ENSSDUG00000014276	wdr3	100	79.193	ENSPKIG00000024900	wdr3	100	78.981	Paramormyrops_kingsleyae
ENSSDUG00000014276	wdr3	98	70.639	ENSPSIG00000017455	WDR3	98	70.206	Pelodiscus_sinensis
ENSSDUG00000014276	wdr3	98	84.891	ENSPMGG00000022686	wdr3	99	83.370	Periophthalmus_magnuspinnatus
ENSSDUG00000014276	wdr3	99	68.929	ENSPEMG00000011928	Wdr3	99	69.035	Peromyscus_maniculatus_bairdii
ENSSDUG00000014276	wdr3	95	69.700	ENSPCIG00000000938	WDR3	99	70.022	Phascolarctos_cinereus
ENSSDUG00000014276	wdr3	100	88.136	ENSPFOG00000017900	wdr3	100	88.347	Poecilia_formosa
ENSSDUG00000014276	wdr3	100	88.441	ENSPLAG00000014362	wdr3	100	88.653	Poecilia_latipinna
ENSSDUG00000014276	wdr3	99	70.732	ENSPPYG00000000970	WDR3	98	70.856	Pongo_abelii
ENSSDUG00000014276	wdr3	92	57.506	ENSPCAG00000001265	WDR3	99	57.390	Procavia_capensis
ENSSDUG00000014276	wdr3	100	85.775	ENSPNYG00000006217	wdr3	100	85.244	Pundamilia_nyererei
ENSSDUG00000014276	wdr3	99	81.722	ENSPNAG00000006843	wdr3	99	80.659	Pygocentrus_nattereri
ENSSDUG00000014276	wdr3	99	68.538	ENSRNOG00000019670	Wdr3	99	68.432	Rattus_norvegicus
ENSSDUG00000014276	wdr3	99	70.106	ENSRBIG00000039149	WDR3	97	69.622	Rhinopithecus_bieti
ENSSDUG00000014276	wdr3	99	70.551	ENSRROG00000028066	WDR3	99	70.805	Rhinopithecus_roxellana
ENSSDUG00000014276	wdr3	99	36.912	YLR129W	DIP2	98	36.688	Saccharomyces_cerevisiae
ENSSDUG00000014276	wdr3	100	71.005	ENSSBOG00000015569	WDR3	98	71.212	Saimiri_boliviensis_boliviensis
ENSSDUG00000014276	wdr3	99	69.020	ENSSHAG00000005169	WDR3	98	69.322	Sarcophilus_harrisii
ENSSDUG00000014276	wdr3	100	77.813	ENSSFOG00015000595	wdr3	100	77.176	Scleropages_formosus
ENSSDUG00000014276	wdr3	100	90.572	ENSSMAG00000008334	wdr3	100	90.678	Scophthalmus_maximus
ENSSDUG00000014276	wdr3	100	97.134	ENSSLDG00000012837	wdr3	100	97.134	Seriola_lalandi_dorsalis
ENSSDUG00000014276	wdr3	94	64.520	ENSSARG00000002347	WDR3	99	64.407	Sorex_araneus
ENSSDUG00000014276	wdr3	98	66.376	ENSSPUG00000005582	WDR3	98	65.971	Sphenodon_punctatus
ENSSDUG00000014276	wdr3	99	70.127	ENSSSCG00000006727	WDR3	98	70.346	Sus_scrofa
ENSSDUG00000014276	wdr3	98	68.615	ENSTGUG00000013357	WDR3	98	68.398	Taeniopygia_guttata
ENSSDUG00000014276	wdr3	100	84.926	ENSTRUG00000002727	wdr3	100	84.926	Takifugu_rubripes
ENSSDUG00000014276	wdr3	99	78.216	ENSTNIG00000005299	wdr3	98	78.549	Tetraodon_nigroviridis
ENSSDUG00000014276	wdr3	84	76.562	ENSTBEG00000002549	WDR3	64	76.562	Tupaia_belangeri
ENSSDUG00000014276	wdr3	99	63.030	ENSTTRG00000003817	WDR3	98	63.203	Tursiops_truncatus
ENSSDUG00000014276	wdr3	99	67.060	ENSUAMG00000023139	WDR3	98	66.484	Ursus_americanus
ENSSDUG00000014276	wdr3	90	68.713	ENSVPAG00000000073	WDR3	87	68.944	Vicugna_pacos
ENSSDUG00000014276	wdr3	99	70.201	ENSVVUG00000010629	WDR3	98	70.238	Vulpes_vulpes
ENSSDUG00000014276	wdr3	98	69.405	ENSXETG00000009920	wdr3	98	69.297	Xenopus_tropicalis
ENSSDUG00000014276	wdr3	100	88.123	ENSXMAG00000009827	wdr3	100	88.335	Xiphophorus_maculatus