EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014360 (Gene tree)
Gene ID: 111234081
Gene Symbol: -
Alias: -
Full Name: RNA polymerase III subunit G like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7425 bases
Position: chrBDQW01000435.1:305307-312731
Accession: 111234081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019716	RNA_pol_3_Rpc31	PF11705.8	5.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020065	-	4376	XM_022761997	ENSSDUP00000019716	223 (aa)	XP_022617718	UPI000BBE5AD8

Gene Model

Click here to download ENSSDUG00000014360's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03020	RNA polymerase	KEGG
sdu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014360	-	100	45.374	ENSSDUG00000018449	-	100	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014360	-	100	78.571	ENSAPOG00000021349	-	100	74.107	Acanthochromis_polyacanthus
ENSSDUG00000014360	-	100	60.987	ENSAOCG00000023705	-	62	81.148	Amphiprion_ocellaris
ENSSDUG00000014360	-	100	77.778	ENSAPEG00000012672	-	100	74.667	Amphiprion_percula
ENSSDUG00000014360	-	100	71.491	ENSHBUG00000009915	-	100	71.491	Haplochromis_burtoni
ENSSDUG00000014360	-	96	78.802	ENSLBEG00000020028	-	98	80.000	Labrus_bergylta
ENSSDUG00000014360	-	100	86.547	ENSMAMG00000017037	-	100	86.547	Mastacembelus_armatus
ENSSDUG00000014360	-	100	71.491	ENSMZEG00005010079	-	100	71.491	Maylandia_zebra
ENSSDUG00000014360	-	100	52.018	ENSNBRG00000008808	-	96	55.310	Neolamprologus_brichardi
ENSSDUG00000014360	-	100	76.233	ENSONIG00000001460	-	98	76.233	Oreochromis_niloticus
ENSSDUG00000014360	-	95	60.849	ENSORLG00000020581	-	51	73.786	Oryzias_latipes
ENSSDUG00000014360	-	91	59.709	ENSORLG00015013774	-	100	57.778	Oryzias_latipes_hsok
ENSSDUG00000014360	-	93	68.269	ENSPFOG00000014955	-	100	69.507	Poecilia_formosa
ENSSDUG00000014360	-	93	63.942	ENSPLAG00000018896	-	100	65.471	Poecilia_latipinna
ENSSDUG00000014360	-	93	68.269	ENSPMEG00000000239	-	100	69.507	Poecilia_mexicana
ENSSDUG00000014360	-	93	53.589	ENSPREG00000015562	-	100	61.181	Poecilia_reticulata
ENSSDUG00000014360	-	100	74.888	ENSSPAG00000010477	-	99	76.339	Stegastes_partitus
ENSSDUG00000014360	-	56	65.600	ENSTNIG00000002936	-	99	56.502	Tetraodon_nigroviridis