EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014403 (Gene tree)
Gene ID: 111221034
Gene Symbol: ythdf3
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8037 bases
Position: chrBDQW01000079.1:1894700-1902736
Accession: 111221034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019804	YTH	PF04146.15	2.2e-39	1	1
ENSSDUP00000019783	YTH	PF04146.15	2.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020154	-	1521	-	ENSSDUP00000019804	506 (aa)	-	-
ENSSDUT00000020133	-	3594	XM_022744358	ENSSDUP00000019783	603 (aa)	XP_022600079	UPI000BBEE64C

Gene Model

Click here to download ENSSDUG00000014403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014403	ythdf3	98	76.016	ENSSDUG00000015823	YTHDF1	98	63.071
ENSSDUG00000014403	ythdf3	97	78.995	ENSSDUG00000016335	ythdf2	98	64.057
ENSSDUG00000014403	ythdf3	94	60.512	ENSSDUG00000000435	ythdf1	96	59.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014403	ythdf3	100	97.844	ENSAPOG00000024006	ythdf3	100	97.844	Acanthochromis_polyacanthus
ENSSDUG00000014403	ythdf3	99	89.094	ENSACIG00000022287	ythdf3	99	89.765	Amphilophus_citrinellus
ENSSDUG00000014403	ythdf3	100	97.844	ENSAOCG00000000723	ythdf3	100	97.844	Amphiprion_ocellaris
ENSSDUG00000014403	ythdf3	100	97.347	ENSAPEG00000020352	ythdf3	100	97.347	Amphiprion_percula
ENSSDUG00000014403	ythdf3	99	100.000	ENSATEG00000011478	ythdf3	97	100.000	Anabas_testudineus
ENSSDUG00000014403	ythdf3	99	74.315	ENSAPLG00000011329	YTHDF3	100	70.812	Anas_platyrhynchos
ENSSDUG00000014403	ythdf3	96	74.690	ENSACAG00000016837	YTHDF3	98	70.855	Anolis_carolinensis
ENSSDUG00000014403	ythdf3	98	96.833	ENSACLG00000026145	ythdf3	99	94.884	Astatotilapia_calliptera
ENSSDUG00000014403	ythdf3	96	87.892	ENSAMXG00000030366	ythdf3	99	77.620	Astyanax_mexicanus
ENSSDUG00000014403	ythdf3	96	74.603	ENSCPBG00000021405	YTHDF3	98	71.652	Chrysemys_picta_bellii
ENSSDUG00000014403	ythdf3	69	49.765	ENSCGRG00000008289	-	93	63.248	Cricetulus_griseus_crigri
ENSSDUG00000014403	ythdf3	100	96.358	ENSCSEG00000014861	ythdf3	99	96.358	Cynoglossus_semilaevis
ENSSDUG00000014403	ythdf3	100	92.040	ENSCVAG00000018114	ythdf3	96	96.429	Cyprinodon_variegatus
ENSSDUG00000014403	ythdf3	100	82.680	ENSDARG00000057939	ythdf3	85	86.404	Danio_rerio
ENSSDUG00000014403	ythdf3	98	74.609	ENSETEG00000007144	YTHDF3	100	71.278	Echinops_telfairi
ENSSDUG00000014403	ythdf3	96	89.912	ENSELUG00000014824	ythdf3	100	81.199	Esox_lucius
ENSSDUG00000014403	ythdf3	99	75.433	ENSFALG00000005503	YTHDF3	99	71.254	Ficedula_albicollis
ENSSDUG00000014403	ythdf3	98	96.804	ENSFHEG00000016395	ythdf3	100	93.986	Fundulus_heteroclitus
ENSSDUG00000014403	ythdf3	95	91.388	ENSGMOG00000014950	ythdf3	85	90.090	Gadus_morhua
ENSSDUG00000014403	ythdf3	99	75.260	ENSGALG00000039774	YTHDF3	98	71.204	Gallus_gallus
ENSSDUG00000014403	ythdf3	100	93.367	ENSGAFG00000006529	ythdf3	100	93.367	Gambusia_affinis
ENSSDUG00000014403	ythdf3	99	93.522	ENSGACG00000002998	ythdf3	99	93.355	Gasterosteus_aculeatus
ENSSDUG00000014403	ythdf3	96	74.603	ENSGAGG00000003851	YTHDF3	98	71.652	Gopherus_agassizii
ENSSDUG00000014403	ythdf3	98	96.833	ENSHBUG00000018631	ythdf3	99	94.572	Haplochromis_burtoni
ENSSDUG00000014403	ythdf3	99	85.546	ENSHCOG00000015277	ythdf3	82	95.890	Hippocampus_comes
ENSSDUG00000014403	ythdf3	96	86.607	ENSIPUG00000014157	YTHDF1	85	85.590	Ictalurus_punctatus
ENSSDUG00000014403	ythdf3	98	97.260	ENSKMAG00000008447	ythdf3	97	97.696	Kryptolebias_marmoratus
ENSSDUG00000014403	ythdf3	100	87.934	ENSLBEG00000017003	ythdf3	99	89.214	Labrus_bergylta
ENSSDUG00000014403	ythdf3	92	88.426	ENSLOCG00000004932	ythdf3	85	86.842	Lepisosteus_oculatus
ENSSDUG00000014403	ythdf3	97	89.691	ENSMAMG00000000414	ythdf3	86	95.890	Mastacembelus_armatus
ENSSDUG00000014403	ythdf3	99	96.512	ENSMZEG00005021836	ythdf3	99	96.512	Maylandia_zebra
ENSSDUG00000014403	ythdf3	98	75.742	ENSMGAG00000011168	YTHDF3	99	70.517	Meleagris_gallopavo
ENSSDUG00000014403	ythdf3	62	68.325	ENSMAUG00000012560	Ythdf3	99	67.810	Mesocricetus_auratus
ENSSDUG00000014403	ythdf3	62	53.125	ENSMICG00000009379	-	99	47.493	Microcebus_murinus
ENSSDUG00000014403	ythdf3	97	90.408	ENSMMOG00000003402	ythdf3	96	94.500	Mola_mola
ENSSDUG00000014403	ythdf3	95	86.636	ENSMODG00000008255	YTHDF3	98	71.528	Monodelphis_domestica
ENSSDUG00000014403	ythdf3	100	97.015	ENSMALG00000000147	ythdf3	100	97.015	Monopterus_albus
ENSSDUG00000014403	ythdf3	96	96.833	ENSNBRG00000023433	ythdf3	99	93.825	Neolamprologus_brichardi
ENSSDUG00000014403	ythdf3	50	82.450	ENSNLEG00000003872	YTHDF3	52	81.818	Nomascus_leucogenys
ENSSDUG00000014403	ythdf3	98	86.463	ENSMEUG00000011285	YTHDF3	99	71.826	Notamacropus_eugenii
ENSSDUG00000014403	ythdf3	99	96.523	ENSONIG00000014175	ythdf3	99	96.523	Oreochromis_niloticus
ENSSDUG00000014403	ythdf3	100	92.703	ENSORLG00000008640	ythdf3	100	91.376	Oryzias_latipes
ENSSDUG00000014403	ythdf3	100	92.537	ENSORLG00020014684	ythdf3	100	91.211	Oryzias_latipes_hni
ENSSDUG00000014403	ythdf3	100	92.703	ENSORLG00015014880	ythdf3	100	91.211	Oryzias_latipes_hsok
ENSSDUG00000014403	ythdf3	100	93.698	ENSOMEG00000008212	ythdf3	100	92.206	Oryzias_melastigma
ENSSDUG00000014403	ythdf3	97	88.106	ENSPKIG00000008298	ythdf3	99	78.788	Paramormyrops_kingsleyae
ENSSDUG00000014403	ythdf3	96	74.558	ENSPSIG00000015861	YTHDF3	100	76.565	Pelodiscus_sinensis
ENSSDUG00000014403	ythdf3	99	86.792	ENSPMGG00000023791	ythdf3	96	97.260	Periophthalmus_magnuspinnatus
ENSSDUG00000014403	ythdf3	97	85.965	ENSPCIG00000017629	YTHDF3	98	71.354	Phascolarctos_cinereus
ENSSDUG00000014403	ythdf3	100	94.196	ENSPFOG00000006082	ythdf3	100	94.196	Poecilia_formosa
ENSSDUG00000014403	ythdf3	100	94.362	ENSPLAG00000006902	ythdf3	100	94.362	Poecilia_latipinna
ENSSDUG00000014403	ythdf3	100	94.196	ENSPMEG00000012922	ythdf3	100	94.196	Poecilia_mexicana
ENSSDUG00000014403	ythdf3	100	93.874	ENSPREG00000019781	ythdf3	100	93.874	Poecilia_reticulata
ENSSDUG00000014403	ythdf3	95	87.097	ENSPPYG00000018626	YTHDF3	85	86.026	Pongo_abelii
ENSSDUG00000014403	ythdf3	91	93.617	ENSPVAG00000002740	YTHDF3	85	93.085	Pteropus_vampyrus
ENSSDUG00000014403	ythdf3	98	96.833	ENSPNYG00000002949	ythdf3	99	95.246	Pundamilia_nyererei
ENSSDUG00000014403	ythdf3	95	88.182	ENSPNAG00000021457	ythdf3	84	86.404	Pygocentrus_nattereri
ENSSDUG00000014403	ythdf3	98	85.022	ENSSHAG00000009482	YTHDF3	87	84.279	Sarcophilus_harrisii
ENSSDUG00000014403	ythdf3	96	84.016	ENSSFOG00015015445	ythdf3	97	89.862	Scleropages_formosus
ENSSDUG00000014403	ythdf3	97	95.424	ENSSMAG00000014999	ythdf3	100	95.424	Scophthalmus_maximus
ENSSDUG00000014403	ythdf3	100	100.000	ENSSLDG00000005029	ythdf3	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000014403	ythdf3	98	74.913	ENSSPUG00000009390	YTHDF3	99	71.080	Sphenodon_punctatus
ENSSDUG00000014403	ythdf3	98	98.643	ENSSPAG00000001269	ythdf3	99	96.647	Stegastes_partitus
ENSSDUG00000014403	ythdf3	98	75.826	ENSTGUG00000011243	YTHDF3	100	71.629	Taeniopygia_guttata
ENSSDUG00000014403	ythdf3	98	95.475	ENSTRUG00000007870	ythdf3	100	91.736	Takifugu_rubripes
ENSSDUG00000014403	ythdf3	100	88.760	ENSTNIG00000012698	ythdf3	98	75.795	Tetraodon_nigroviridis
ENSSDUG00000014403	ythdf3	98	71.007	ENSTTRG00000014564	YTHDF3	99	66.259	Tursiops_truncatus
ENSSDUG00000014403	ythdf3	97	87.336	ENSVPAG00000008104	YTHDF3	70	91.160	Vicugna_pacos
ENSSDUG00000014403	ythdf3	96	76.130	ENSXETG00000021659	ythdf3	98	74.867	Xenopus_tropicalis
ENSSDUG00000014403	ythdf3	100	88.391	ENSXCOG00000009687	ythdf3	100	88.060	Xiphophorus_couchianus
ENSSDUG00000014403	ythdf3	100	93.201	ENSXMAG00000009698	ythdf3	100	93.201	Xiphophorus_maculatus