EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000014507 (Gene tree)
Gene ID
111222168
Gene Symbol
msi2a
Alias
cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name
musashi RNA binding protein 2
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
222519 bases
Position
chrBDQW01000091.1:388837-611355
Accession
111222168
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000020028RRM_1PF00076.222e-3312
ENSSDUP00000020028RRM_1PF00076.222e-3322
ENSSDUP00000020004RRM_1PF00076.222.8e-3312
ENSSDUP00000020004RRM_1PF00076.222.8e-3322
ENSSDUP00000019978RRM_1PF00076.224.4e-3312
ENSSDUP00000019978RRM_1PF00076.224.4e-3322
ENSSDUP00000020063RRM_1PF00076.224e-2912
ENSSDUP00000020063RRM_1PF00076.224e-2922
ENSSDUP00000020074RRM_1PF00076.222.2e-2612
ENSSDUP00000020074RRM_1PF00076.222.2e-2622
ENSSDUP00000020101RRM_1PF00076.228.4e-2311
ENSSDUP00000020087RRM_1PF00076.223.2e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000020381-1196-ENSSDUP00000020028307 (aa)-UPI00049794F1
ENSSDUT00000020357-1316-ENSSDUP00000020004347 (aa)-UPI0004966EDC
ENSSDUT00000020331-1496XM_022745758ENSSDUP00000019978407 (aa)XP_022601479UPI0004963CD1
ENSSDUT00000020427-1378-ENSSDUP00000020074226 (aa)--
ENSSDUT00000020453-1490-ENSSDUP00000020101165 (aa)--
ENSSDUT00000020416-942-ENSSDUP00000020063313 (aa)--
ENSSDUT00000020440-843-ENSSDUP00000020087200 (aa)--
Gene Model
Click here to download ENSSDUG00000014507's gene model file
Pathways
Pathway IDPathway NameSource
sdu03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014507's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000014507msi2a10069.301ENSSDUG00000022697-10069.301
ENSSDUG00000014507msi2a7653.600ENSSDUG00000009050-5353.175
ENSSDUG00000014507msi2a6946.552ENSSDUG00000013908hnrnpa1a8540.341
ENSSDUG00000014507msi2a7655.200ENSSDUG00000004787hnrnpaba5154.762
ENSSDUG00000014507msi2a7637.500ENSSDUG00000002394-8936.943
ENSSDUG00000014507msi2a10068.000ENSSDUG00000001027MSI19772.161
ENSSDUG00000014507msi2a10084.478ENSSDUG00000021968-9994.040
ENSSDUG00000014507msi2a6943.103ENSSDUG00000000381hnrnpa39534.932
ENSSDUG00000014507msi2a7651.587ENSSDUG00000010792hnrnpd5451.220
ENSSDUG00000014507msi2a8134.615ENSSDUG00000002431-8535.393
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000014507msi2a10088.110ENSG00000153944MSI29793.227Homo_sapiens
ENSSDUG00000014507msi2a100100.000ENSAPOG00000001658msi2a100100.000Acanthochromis_polyacanthus
ENSSDUG00000014507msi2a9884.356ENSAMEG00000002697MSI29988.650Ailuropoda_melanoleuca
ENSSDUG00000014507msi2a100100.000ENSACIG00000009475msi2a10090.511Amphilophus_citrinellus
ENSSDUG00000014507msi2a8288.889ENSAOCG00000014822msi2a6991.111Amphiprion_ocellaris
ENSSDUG00000014507msi2a100100.000ENSAPEG00000007706msi2a100100.000Amphiprion_percula
ENSSDUG00000014507msi2a100100.000ENSATEG00000010498msi2a100100.000Anabas_testudineus
ENSSDUG00000014507msi2a9393.165ENSATEG00000003301-10093.165Anabas_testudineus
ENSSDUG00000014507msi2a9393.011ENSACAG00000005452MSI28875.871Anolis_carolinensis
ENSSDUG00000014507msi2a10088.110ENSANAG00000037827MSI29793.227Aotus_nancymaae
ENSSDUG00000014507msi2a10099.588ENSACLG00000007752msi2a10099.588Astatotilapia_calliptera
ENSSDUG00000014507msi2a10096.296ENSAMXG00000032796msi2a9796.414Astyanax_mexicanus
ENSSDUG00000014507msi2a10096.296ENSAMXG00000010474msi2b10094.569Astyanax_mexicanus
ENSSDUG00000014507msi2a9888.961ENSBTAG00000004406MSI29494.348Bos_taurus
ENSSDUG00000014507msi2a7270.940WBGene00003423msi-16670.940Caenorhabditis_elegans
ENSSDUG00000014507msi2a10088.110ENSCJAG00000013998MSI29793.227Callithrix_jacchus
ENSSDUG00000014507msi2a9487.580ENSCAFG00020025620MSI28187.188Canis_lupus_dingo
ENSSDUG00000014507msi2a10087.195ENSCHIG00000016580MSI29791.633Capra_hircus
ENSSDUG00000014507msi2a9388.298ENSCPOG00000034042MSI29988.298Cavia_porcellus
ENSSDUG00000014507msi2a10088.110ENSCCAG00000033927MSI29793.227Cebus_capucinus
ENSSDUG00000014507msi2a9392.444ENSCATG00000040879MSI29792.829Cercocebus_atys
ENSSDUG00000014507msi2a10087.749ENSCLAG00000014325MSI210088.184Chinchilla_lanigera
ENSSDUG00000014507msi2a10088.110ENSCSAG00000005633MSI29793.227Chlorocebus_sabaeus
ENSSDUG00000014507msi2a7188.000ENSCHOG00000008660MSI28386.275Choloepus_hoffmanni
ENSSDUG00000014507msi2a10087.692ENSCPBG00000009942MSI28994.475Chrysemys_picta_bellii
ENSSDUG00000014507msi2a6980.645ENSCING00000018579-9053.659Ciona_intestinalis
ENSSDUG00000014507msi2a8753.667ENSCSAVG00000010397-9553.667Ciona_savignyi
ENSSDUG00000014507msi2a9392.444ENSCANG00000036414MSI210088.615Colobus_angolensis_palliatus
ENSSDUG00000014507msi2a10087.538ENSCGRG00001013330Msi29792.829Cricetulus_griseus_chok1gshd
ENSSDUG00000014507msi2a9884.098ENSCGRG00000003141Msi210088.379Cricetulus_griseus_crigri
ENSSDUG00000014507msi2a8297.037ENSCSEG00000013549msi2a10077.596Cynoglossus_semilaevis
ENSSDUG00000014507msi2a10081.173ENSCSEG00000003266-10081.173Cynoglossus_semilaevis
ENSSDUG00000014507msi2a8181.443ENSCSEG00000013557msi2a7993.846Cynoglossus_semilaevis
ENSSDUG00000014507msi2a100100.000ENSCVAG00000017075msi2a10099.712Cyprinodon_variegatus
ENSSDUG00000014507msi2a10093.827ENSDARG00000033901msi2a10084.275Danio_rerio
ENSSDUG00000014507msi2a10097.119ENSDARG00000032614msi2b10097.647Danio_rerio
ENSSDUG00000014507msi2a9393.056ENSDNOG00000014501MSI210093.056Dasypus_novemcinctus
ENSSDUG00000014507msi2a8181.726ENSDORG00000005394Msi27989.231Dipodomys_ordii
ENSSDUG00000014507msi2a6896.460ENSDORG00000028440-10096.460Dipodomys_ordii
ENSSDUG00000014507msi2a6886.667FBgn0260943Rbp68865.278Drosophila_melanogaster
ENSSDUG00000014507msi2a69100.000ENSETEG00000012450-6472.368Echinops_telfairi
ENSSDUG00000014507msi2a9363.578ENSEBUG00000006732msi2a7579.524Eptatretus_burgeri
ENSSDUG00000014507msi2a9390.301ENSEASG00005002965MSI29780.114Equus_asinus_asinus
ENSSDUG00000014507msi2a10085.515ENSECAG00000011435MSI210085.915Equus_caballus
ENSSDUG00000014507msi2a8677.470ENSEEUG00000007810MSI210077.470Erinaceus_europaeus
ENSSDUG00000014507msi2a10095.902ENSELUG00000001361msi2b10088.657Esox_lucius
ENSSDUG00000014507msi2a10095.208ENSELUG00000011747msi2a10095.208Esox_lucius
ENSSDUG00000014507msi2a10088.110ENSFCAG00000041686MSI29793.227Felis_catus
ENSSDUG00000014507msi2a8278.519ENSFCAG00000033787-8375.159Felis_catus
ENSSDUG00000014507msi2a9785.358ENSFDAG00000016118MSI210088.650Fukomys_damarensis
ENSSDUG00000014507msi2a100100.000ENSFHEG00000000084msi2a10099.509Fundulus_heteroclitus
ENSSDUG00000014507msi2a6597.115ENSGMOG00000007596-10097.115Gadus_morhua
ENSSDUG00000014507msi2a10086.895ENSGALG00000005567MSI210087.320Gallus_gallus
ENSSDUG00000014507msi2a9690.164ENSGAFG00000006974msi2a90100.000Gambusia_affinis
ENSSDUG00000014507msi2a10088.934ENSGAGG00000016542MSI210085.246Gopherus_agassizii
ENSSDUG00000014507msi2a9392.444ENSGGOG00000013182MSI210088.615Gorilla_gorilla
ENSSDUG00000014507msi2a10099.588ENSHBUG00000020800msi2a10099.588Haplochromis_burtoni
ENSSDUG00000014507msi2a10078.917ENSHGLG00000012444MSI210079.251Heterocephalus_glaber_female
ENSSDUG00000014507msi2a6896.460ENSHGLG00100004028-8796.491Heterocephalus_glaber_male
ENSSDUG00000014507msi2a7884.058ENSHGLG00100003744MSI210084.615Heterocephalus_glaber_male
ENSSDUG00000014507msi2a10099.588ENSHCOG00000000266msi2a10098.280Hippocampus_comes
ENSSDUG00000014507msi2a9582.422ENSHCOG00000017241-9871.571Hippocampus_comes
ENSSDUG00000014507msi2a10096.296ENSIPUG00000003732msi2b10090.415Ictalurus_punctatus
ENSSDUG00000014507msi2a10095.062ENSIPUG00000021097msi2a10095.062Ictalurus_punctatus
ENSSDUG00000014507msi2a9388.298ENSSTOG00000007884MSI29988.298Ictidomys_tridecemlineatus
ENSSDUG00000014507msi2a7878.894ENSJJAG00000006292-10078.392Jaculus_jaculus
ENSSDUG00000014507msi2a6896.460ENSJJAG00000009467-10096.460Jaculus_jaculus
ENSSDUG00000014507msi2a10099.588ENSKMAG00000009494msi2a10094.349Kryptolebias_marmoratus
ENSSDUG00000014507msi2a100100.000ENSLBEG00000007061msi2a100100.000Labrus_bergylta
ENSSDUG00000014507msi2a9386.528ENSLBEG00000026223-10086.528Labrus_bergylta
ENSSDUG00000014507msi2a5992.308ENSLACG00000016798MSI29892.308Latimeria_chalumnae
ENSSDUG00000014507msi2a10097.119ENSLOCG00000004675msi2b10088.698Lepisosteus_oculatus
ENSSDUG00000014507msi2a9392.444ENSMFAG00000003775MSI210088.615Macaca_fascicularis
ENSSDUG00000014507msi2a9392.444ENSMMUG00000002069MSI210088.615Macaca_mulatta
ENSSDUG00000014507msi2a10088.110ENSMNEG00000045275MSI29793.227Macaca_nemestrina
ENSSDUG00000014507msi2a9392.444ENSMLEG00000033888MSI210088.615Mandrillus_leucophaeus
ENSSDUG00000014507msi2a100100.000ENSMAMG00000010503msi2a100100.000Mastacembelus_armatus
ENSSDUG00000014507msi2a10094.650ENSMAMG00000002488-9994.040Mastacembelus_armatus
ENSSDUG00000014507msi2a10099.588ENSMZEG00005007676msi2a10099.509Maylandia_zebra
ENSSDUG00000014507msi2a10087.216ENSMAUG00000003862Msi210087.644Mesocricetus_auratus
ENSSDUG00000014507msi2a10071.264ENSMICG00000032913-9679.710Microcebus_murinus
ENSSDUG00000014507msi2a10088.110ENSMICG00000013598-9793.227Microcebus_murinus
ENSSDUG00000014507msi2a10087.464ENSMOCG00000005820Msi210087.896Microtus_ochrogaster
ENSSDUG00000014507msi2a9693.827ENSMMOG00000008348msi2a90100.000Mola_mola
ENSSDUG00000014507msi2a7883.575ENSMODG00000014790MSI210084.135Monodelphis_domestica
ENSSDUG00000014507msi2a100100.000ENSMALG00000000071msi2a100100.000Monopterus_albus
ENSSDUG00000014507msi2a10087.805MGP_CAROLIEiJ_G0016948Msi210096.460Mus_caroli
ENSSDUG00000014507msi2a10087.805ENSMUSG00000069769Msi210096.460Mus_musculus
ENSSDUG00000014507msi2a10087.805MGP_PahariEiJ_G0018079Msi210096.460Mus_pahari
ENSSDUG00000014507msi2a10087.805MGP_SPRETEiJ_G0017795Msi210096.460Mus_spretus
ENSSDUG00000014507msi2a9889.286ENSMPUG00000015377MSI29494.348Mustela_putorius_furo
ENSSDUG00000014507msi2a9889.286ENSMLUG00000007865MSI29493.913Myotis_lucifugus
ENSSDUG00000014507msi2a10087.464ENSNGAG00000017807Msi210087.896Nannospalax_galili
ENSSDUG00000014507msi2a10099.588ENSNBRG00000014596msi2a10099.361Neolamprologus_brichardi
ENSSDUG00000014507msi2a9392.444ENSNLEG00000008059MSI29692.891Nomascus_leucogenys
ENSSDUG00000014507msi2a68100.000ENSOPRG00000000872-6483.553Ochotona_princeps
ENSSDUG00000014507msi2a10087.749ENSODEG00000011974MSI210088.184Octodon_degus
ENSSDUG00000014507msi2a82100.000ENSONIG00000001972msi2a84100.000Oreochromis_niloticus
ENSSDUG00000014507msi2a9792.308ENSOANG00000005667MSI29978.960Ornithorhynchus_anatinus
ENSSDUG00000014507msi2a9889.286ENSOCUG00000010440MSI29494.348Oryctolagus_cuniculus
ENSSDUG00000014507msi2a100100.000ENSORLG00000009671msi2a10097.125Oryzias_latipes
ENSSDUG00000014507msi2a100100.000ENSORLG00020021556msi2a100100.000Oryzias_latipes_hni
ENSSDUG00000014507msi2a100100.000ENSORLG00015004592msi2a10097.125Oryzias_latipes_hsok
ENSSDUG00000014507msi2a100100.000ENSOMEG00000000146msi2a100100.000Oryzias_melastigma
ENSSDUG00000014507msi2a9885.714ENSOGAG00000005621MSI29789.565Otolemur_garnettii
ENSSDUG00000014507msi2a9785.358ENSPPAG00000037697MSI210088.615Pan_paniscus
ENSSDUG00000014507msi2a9790.429ENSPPRG00000001848MSI29194.348Panthera_pardus
ENSSDUG00000014507msi2a9487.658ENSPTIG00000021678MSI29688.141Panthera_tigris_altaica
ENSSDUG00000014507msi2a7875.314ENSPTIG00000021873-9175.314Panthera_tigris_altaica
ENSSDUG00000014507msi2a9392.444ENSPTRG00000009437MSI210088.615Pan_troglodytes
ENSSDUG00000014507msi2a10088.110ENSPANG00000022319MSI29793.227Papio_anubis
ENSSDUG00000014507msi2a9590.444ENSPKIG00000007038-9693.004Paramormyrops_kingsleyae
ENSSDUG00000014507msi2a5995.604ENSPKIG00000017107-8195.604Paramormyrops_kingsleyae
ENSSDUG00000014507msi2a10095.062ENSPSIG00000008618MSI210081.176Pelodiscus_sinensis
ENSSDUG00000014507msi2a10099.361ENSPMGG00000005888msi2a10099.361Periophthalmus_magnuspinnatus
ENSSDUG00000014507msi2a6896.460ENSPEMG00000021793-10096.460Peromyscus_maniculatus_bairdii
ENSSDUG00000014507msi2a10086.072ENSPCIG00000006063MSI210086.479Phascolarctos_cinereus
ENSSDUG00000014507msi2a6599.048ENSPFOG00000019337MSI29299.048Poecilia_formosa
ENSSDUG00000014507msi2a82100.000ENSPLAG00000000436msi2a8687.654Poecilia_latipinna
ENSSDUG00000014507msi2a8288.889ENSPMEG00000013247msi2a75100.000Poecilia_mexicana
ENSSDUG00000014507msi2a100100.000ENSPREG00000000881msi2a10099.754Poecilia_reticulata
ENSSDUG00000014507msi2a9389.916ENSPPYG00000008244-10089.916Pongo_abelii
ENSSDUG00000014507msi2a9064.286ENSPCAG00000010552MSI29589.231Procavia_capensis
ENSSDUG00000014507msi2a6996.491ENSPCOG00000019195-9396.154Propithecus_coquereli
ENSSDUG00000014507msi2a9385.274ENSPVAG00000017053MSI29985.274Pteropus_vampyrus
ENSSDUG00000014507msi2a10099.588ENSPNYG00000018393msi2a10099.588Pundamilia_nyererei
ENSSDUG00000014507msi2a10096.296ENSPNAG00000000844msi2b10094.268Pygocentrus_nattereri
ENSSDUG00000014507msi2a10095.885ENSPNAG00000014957msi2a10094.586Pygocentrus_nattereri
ENSSDUG00000014507msi2a9392.806ENSRNOG00000025338Msi210092.806Rattus_norvegicus
ENSSDUG00000014507msi2a5573.626ENSRBIG00000032064-8488.158Rhinopithecus_bieti
ENSSDUG00000014507msi2a6996.491ENSRROG00000034421-9296.491Rhinopithecus_roxellana
ENSSDUG00000014507msi2a9392.857ENSSBOG00000026425MSI210088.615Saimiri_boliviensis_boliviensis
ENSSDUG00000014507msi2a9785.358ENSSHAG00000008672MSI210088.615Sarcophilus_harrisii
ENSSDUG00000014507msi2a9787.459ENSSFOG00015021687-9793.243Scleropages_formosus
ENSSDUG00000014507msi2a10083.673ENSSFOG00015012168msi2b10068.998Scleropages_formosus
ENSSDUG00000014507msi2a100100.000ENSSMAG00000018484msi2a100100.000Scophthalmus_maximus
ENSSDUG00000014507msi2a100100.000ENSSLDG00000017172msi2a100100.000Seriola_lalandi_dorsalis
ENSSDUG00000014507msi2a5579.121ENSSLDG00000021332-6879.121Seriola_lalandi_dorsalis
ENSSDUG00000014507msi2a8295.556ENSSPUG00000000913-9495.556Sphenodon_punctatus
ENSSDUG00000014507msi2a100100.000ENSSPAG00000017793msi2a100100.000Stegastes_partitus
ENSSDUG00000014507msi2a9692.177ENSSSCG00000038505MSI29793.227Sus_scrofa
ENSSDUG00000014507msi2a7884.058ENSTGUG00000008452MSI210084.615Taeniopygia_guttata
ENSSDUG00000014507msi2a9798.477ENSTRUG00000021248msi2a9598.477Takifugu_rubripes
ENSSDUG00000014507msi2a8277.778ENSTBEG00000001241MSI27377.686Tupaia_belangeri
ENSSDUG00000014507msi2a9384.454ENSTTRG00000002189MSI29194.737Tursiops_truncatus
ENSSDUG00000014507msi2a9889.286ENSUAMG00000000700MSI29694.595Ursus_americanus
ENSSDUG00000014507msi2a8992.213ENSUMAG00000000505MSI29593.782Ursus_maritimus
ENSSDUG00000014507msi2a6196.000ENSVPAG00000006837-6281.868Vicugna_pacos
ENSSDUG00000014507msi2a10087.749ENSVVUG00000011783MSI29892.411Vulpes_vulpes
ENSSDUG00000014507msi2a9998.413ENSXCOG00000006113msi2a10093.612Xiphophorus_couchianus
ENSSDUG00000014507msi2a100100.000ENSXMAG00000000608msi2a10099.509Xiphophorus_maculatus

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