EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000014528 (Gene tree)
Gene ID: 111216530
Gene Symbol: REXO5
Alias: NEF-sp
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8951 bases
Position: chrBDQW01000035.1:1209013-1217963
Accession: 111216530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000019960	RRM_1	PF00076.22	1.2e-14	1	2
ENSSDUP00000019960	RRM_1	PF00076.22	1.2e-14	2	2
ENSSDUP00000019960	RNase_T	PF00929.24	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020312	REXO5-201	3197	XM_022738058	ENSSDUP00000019960	814 (aa)	XP_022593779	UPI000BBE34B5

Gene Model

Click here to download ENSSDUG00000014528's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014528	REXO5	91	34.941	ENSG00000005189	REXO5	99	59.574	Homo_sapiens
ENSSDUG00000014528	REXO5	97	74.749	ENSAPOG00000008514	REXO5	97	74.340	Acanthochromis_polyacanthus
ENSSDUG00000014528	REXO5	91	35.019	ENSAMEG00000006178	REXO5	91	34.720	Ailuropoda_melanoleuca
ENSSDUG00000014528	REXO5	50	85.294	ENSAOCG00000003481	-	78	85.294	Amphiprion_ocellaris
ENSSDUG00000014528	REXO5	97	74.906	ENSAPEG00000010627	REXO5	98	74.497	Amphiprion_percula
ENSSDUG00000014528	REXO5	74	77.796	ENSATEG00000004682	REXO5	97	78.093	Anabas_testudineus
ENSSDUG00000014528	REXO5	93	34.943	ENSAPLG00000015740	REXO5	97	35.355	Anas_platyrhynchos
ENSSDUG00000014528	REXO5	91	33.730	ENSACAG00000009744	REXO5	91	33.598	Anolis_carolinensis
ENSSDUG00000014528	REXO5	91	33.984	ENSANAG00000034379	REXO5	91	34.076	Aotus_nancymaae
ENSSDUG00000014528	REXO5	78	63.438	ENSACLG00000004778	REXO5	99	63.125	Astatotilapia_calliptera
ENSSDUG00000014528	REXO5	91	34.334	ENSBTAG00000006449	REXO5	89	34.204	Bos_taurus
ENSSDUG00000014528	REXO5	91	34.505	ENSCJAG00000009363	REXO5	85	46.008	Callithrix_jacchus
ENSSDUG00000014528	REXO5	97	33.942	ENSCAFG00000017924	REXO5	97	33.760	Canis_familiaris
ENSSDUG00000014528	REXO5	97	33.661	ENSCAFG00020021846	REXO5	96	33.580	Canis_lupus_dingo
ENSSDUG00000014528	REXO5	91	35.163	ENSCHIG00000022443	REXO5	91	35.233	Capra_hircus
ENSSDUG00000014528	REXO5	91	33.463	ENSCPOG00000008940	REXO5	85	41.096	Cavia_porcellus
ENSSDUG00000014528	REXO5	91	34.375	ENSCCAG00000034936	REXO5	91	34.469	Cebus_capucinus
ENSSDUG00000014528	REXO5	91	35.294	ENSCATG00000044063	REXO5	91	34.948	Cercocebus_atys
ENSSDUG00000014528	REXO5	91	33.636	ENSCLAG00000008033	REXO5	86	33.506	Chinchilla_lanigera
ENSSDUG00000014528	REXO5	91	35.294	ENSCSAG00000007562	REXO5	91	34.948	Chlorocebus_sabaeus
ENSSDUG00000014528	REXO5	91	34.955	ENSCPBG00000019062	REXO5	91	35.188	Chrysemys_picta_bellii
ENSSDUG00000014528	REXO5	91	35.163	ENSCANG00000035776	REXO5	91	34.817	Colobus_angolensis_palliatus
ENSSDUG00000014528	REXO5	91	32.637	ENSCGRG00001016179	-	92	32.326	Cricetulus_griseus_chok1gshd
ENSSDUG00000014528	REXO5	83	44.528	ENSCGRG00000010868	-	83	44.528	Cricetulus_griseus_crigri
ENSSDUG00000014528	REXO5	70	63.715	ENSCSEG00000002060	-	99	63.368	Cynoglossus_semilaevis
ENSSDUG00000014528	REXO5	53	70.833	ENSCVAG00000014887	-	81	70.833	Cyprinodon_variegatus
ENSSDUG00000014528	REXO5	93	35.149	ENSEASG00005007266	REXO5	98	33.565	Equus_asinus_asinus
ENSSDUG00000014528	REXO5	93	34.359	ENSECAG00000018769	REXO5	82	34.194	Equus_caballus
ENSSDUG00000014528	REXO5	80	49.240	ENSEEUG00000003572	REXO5	84	49.240	Erinaceus_europaeus
ENSSDUG00000014528	REXO5	91	33.812	ENSFCAG00000015160	REXO5	91	33.290	Felis_catus
ENSSDUG00000014528	REXO5	91	35.317	ENSFALG00000014026	REXO5	97	35.379	Ficedula_albicollis
ENSSDUG00000014528	REXO5	99	61.916	ENSFHEG00000013388	REXO5	98	62.547	Fundulus_heteroclitus
ENSSDUG00000014528	REXO5	91	34.941	ENSGALG00000002239	REXO5	92	34.681	Gallus_gallus
ENSSDUG00000014528	REXO5	98	57.353	ENSGAFG00000011045	REXO5	96	58.406	Gambusia_affinis
ENSSDUG00000014528	REXO5	91	35.678	ENSGAGG00000008242	REXO5	91	35.484	Gopherus_agassizii
ENSSDUG00000014528	REXO5	91	35.072	ENSGGOG00000004539	REXO5	91	34.555	Gorilla_gorilla
ENSSDUG00000014528	REXO5	98	63.761	ENSHBUG00000017976	REXO5	98	64.187	Haplochromis_burtoni
ENSSDUG00000014528	REXO5	86	33.104	ENSHGLG00000012652	REXO5	98	33.104	Heterocephalus_glaber_female
ENSSDUG00000014528	REXO5	93	32.861	ENSHGLG00100013255	REXO5	91	38.571	Heterocephalus_glaber_male
ENSSDUG00000014528	REXO5	66	55.229	ENSHCOG00000008648	REXO5	90	57.824	Hippocampus_comes
ENSSDUG00000014528	REXO5	66	39.928	ENSSTOG00000007071	REXO5	79	39.928	Ictidomys_tridecemlineatus
ENSSDUG00000014528	REXO5	91	35.106	ENSJJAG00000023821	-	91	34.840	Jaculus_jaculus
ENSSDUG00000014528	REXO5	99	66.087	ENSKMAG00000009488	REXO5	97	66.667	Kryptolebias_marmoratus
ENSSDUG00000014528	REXO5	100	68.940	ENSLBEG00000009276	REXO5	98	69.962	Labrus_bergylta
ENSSDUG00000014528	REXO5	78	37.670	ENSLACG00000001758	REXO5	99	37.900	Latimeria_chalumnae
ENSSDUG00000014528	REXO5	91	35.564	ENSLAFG00000006157	REXO5	92	35.696	Loxodonta_africana
ENSSDUG00000014528	REXO5	91	35.294	ENSMFAG00000036613	REXO5	91	34.948	Macaca_fascicularis
ENSSDUG00000014528	REXO5	91	35.611	ENSMMUG00000016748	REXO5	91	35.395	Macaca_mulatta
ENSSDUG00000014528	REXO5	91	35.294	ENSMNEG00000045028	REXO5	91	34.948	Macaca_nemestrina
ENSSDUG00000014528	REXO5	91	35.294	ENSMLEG00000029851	REXO5	91	34.948	Mandrillus_leucophaeus
ENSSDUG00000014528	REXO5	99	74.476	ENSMAMG00000006915	REXO5	94	75.282	Mastacembelus_armatus
ENSSDUG00000014528	REXO5	98	63.014	ENSMZEG00005013657	REXO5	98	63.430	Maylandia_zebra
ENSSDUG00000014528	REXO5	91	35.733	ENSMGAG00000010369	REXO5	97	35.518	Meleagris_gallopavo
ENSSDUG00000014528	REXO5	100	33.848	ENSMICG00000014886	REXO5	91	35.111	Microcebus_murinus
ENSSDUG00000014528	REXO5	51	37.471	ENSMOCG00000010062	-	88	37.740	Microtus_ochrogaster
ENSSDUG00000014528	REXO5	52	75.510	ENSMMOG00000011330	-	83	75.510	Mola_mola
ENSSDUG00000014528	REXO5	93	34.125	ENSMODG00000007059	REXO5	87	34.053	Monodelphis_domestica
ENSSDUG00000014528	REXO5	91	32.245	MGP_CAROLIEiJ_G0030385	-	91	32.115	Mus_caroli
ENSSDUG00000014528	REXO5	91	32.637	ENSMUSG00000030924	Rexo5	90	37.799	Mus_musculus
ENSSDUG00000014528	REXO5	91	32.199	MGP_SPRETEiJ_G0031499	-	91	32.068	Mus_spretus
ENSSDUG00000014528	REXO5	91	35.844	ENSMPUG00000013643	REXO5	91	35.770	Mustela_putorius_furo
ENSSDUG00000014528	REXO5	91	34.338	ENSNGAG00000002025	-	89	41.363	Nannospalax_galili
ENSSDUG00000014528	REXO5	70	53.966	ENSNBRG00000006877	REXO5	90	54.561	Neolamprologus_brichardi
ENSSDUG00000014528	REXO5	91	34.420	ENSNLEG00000012334	REXO5	91	33.901	Nomascus_leucogenys
ENSSDUG00000014528	REXO5	91	33.506	ENSMEUG00000015298	REXO5	97	33.464	Notamacropus_eugenii
ENSSDUG00000014528	REXO5	83	35.644	ENSOPRG00000011398	REXO5	81	35.644	Ochotona_princeps
ENSSDUG00000014528	REXO5	98	62.889	ENSONIG00000000148	REXO5	100	64.421	Oreochromis_niloticus
ENSSDUG00000014528	REXO5	91	36.767	ENSOANG00000014291	REXO5	97	36.684	Ornithorhynchus_anatinus
ENSSDUG00000014528	REXO5	93	36.446	ENSOCUG00000009913	REXO5	91	36.399	Oryctolagus_cuniculus
ENSSDUG00000014528	REXO5	98	62.407	ENSORLG00000009738	REXO5	99	62.829	Oryzias_latipes
ENSSDUG00000014528	REXO5	98	62.438	ENSORLG00020010270	REXO5	99	63.079	Oryzias_latipes_hni
ENSSDUG00000014528	REXO5	98	62.360	ENSORLG00015009678	REXO5	99	62.782	Oryzias_latipes_hsok
ENSSDUG00000014528	REXO5	97	60.979	ENSOMEG00000019491	REXO5	97	61.034	Oryzias_melastigma
ENSSDUG00000014528	REXO5	91	33.552	ENSOGAG00000011564	REXO5	91	33.552	Otolemur_garnettii
ENSSDUG00000014528	REXO5	91	35.033	ENSOARG00000013401	REXO5	92	34.923	Ovis_aries
ENSSDUG00000014528	REXO5	91	34.293	ENSPPAG00000035005	REXO5	91	33.903	Pan_paniscus
ENSSDUG00000014528	REXO5	91	32.984	ENSPPRG00000022345	REXO5	90	33.114	Panthera_pardus
ENSSDUG00000014528	REXO5	91	33.898	ENSPTIG00000012096	REXO5	91	33.771	Panthera_tigris_altaica
ENSSDUG00000014528	REXO5	91	34.293	ENSPTRG00000007851	REXO5	91	34.293	Pan_troglodytes
ENSSDUG00000014528	REXO5	91	35.294	ENSPANG00000006898	REXO5	91	34.948	Papio_anubis
ENSSDUG00000014528	REXO5	93	42.214	ENSPKIG00000014406	REXO5	98	41.430	Paramormyrops_kingsleyae
ENSSDUG00000014528	REXO5	97	34.541	ENSPSIG00000012172	REXO5	97	34.390	Pelodiscus_sinensis
ENSSDUG00000014528	REXO5	82	48.563	ENSPCIG00000029238	-	91	33.965	Phascolarctos_cinereus
ENSSDUG00000014528	REXO5	98	59.141	ENSPFOG00000012767	REXO5	98	59.950	Poecilia_formosa
ENSSDUG00000014528	REXO5	98	59.018	ENSPLAG00000006408	REXO5	98	59.826	Poecilia_latipinna
ENSSDUG00000014528	REXO5	98	59.141	ENSPMEG00000007726	REXO5	98	60.075	Poecilia_mexicana
ENSSDUG00000014528	REXO5	100	58.384	ENSPREG00000000146	REXO5	98	59.080	Poecilia_reticulata
ENSSDUG00000014528	REXO5	91	34.811	ENSPPYG00000007163	REXO5	91	34.293	Pongo_abelii
ENSSDUG00000014528	REXO5	89	35.591	ENSPCAG00000006265	REXO5	98	35.638	Procavia_capensis
ENSSDUG00000014528	REXO5	100	33.373	ENSPCOG00000018775	REXO5	91	34.980	Propithecus_coquereli
ENSSDUG00000014528	REXO5	91	35.649	ENSPVAG00000003293	REXO5	96	35.649	Pteropus_vampyrus
ENSSDUG00000014528	REXO5	84	58.017	ENSPNYG00000006922	REXO5	92	62.252	Pundamilia_nyererei
ENSSDUG00000014528	REXO5	95	42.574	ENSPNAG00000018866	-	97	42.572	Pygocentrus_nattereri
ENSSDUG00000014528	REXO5	94	32.066	ENSRNOG00000014513	Rexo5	92	31.848	Rattus_norvegicus
ENSSDUG00000014528	REXO5	91	35.348	ENSRBIG00000035163	REXO5	81	35.263	Rhinopithecus_bieti
ENSSDUG00000014528	REXO5	91	35.348	ENSRROG00000034741	REXO5	91	35.263	Rhinopithecus_roxellana
ENSSDUG00000014528	REXO5	91	34.505	ENSSBOG00000029650	REXO5	95	34.551	Saimiri_boliviensis_boliviensis
ENSSDUG00000014528	REXO5	91	35.881	ENSSHAG00000005042	REXO5	91	35.631	Sarcophilus_harrisii
ENSSDUG00000014528	REXO5	93	42.567	ENSSFOG00015007581	REXO5	94	41.814	Scleropages_formosus
ENSSDUG00000014528	REXO5	99	73.358	ENSSMAG00000000709	REXO5	98	73.120	Scophthalmus_maximus
ENSSDUG00000014528	REXO5	97	95.960	ENSSLDG00000007641	REXO5	97	96.086	Seriola_lalandi_dorsalis
ENSSDUG00000014528	REXO5	52	87.500	ENSSPAG00000007050	-	79	87.500	Stegastes_partitus
ENSSDUG00000014528	REXO5	91	35.425	ENSSSCG00000007855	REXO5	91	35.294	Sus_scrofa
ENSSDUG00000014528	REXO5	91	35.271	ENSTGUG00000009219	REXO5	97	35.241	Taeniopygia_guttata
ENSSDUG00000014528	REXO5	99	63.022	ENSTRUG00000015295	-	96	63.250	Takifugu_rubripes
ENSSDUG00000014528	REXO5	65	35.229	ENSTBEG00000008797	REXO5	69	35.229	Tupaia_belangeri
ENSSDUG00000014528	REXO5	91	34.948	ENSTTRG00000016439	REXO5	91	35.256	Tursiops_truncatus
ENSSDUG00000014528	REXO5	86	34.349	ENSUAMG00000017756	REXO5	98	34.211	Ursus_americanus
ENSSDUG00000014528	REXO5	93	30.999	ENSVPAG00000003459	REXO5	92	31.291	Vicugna_pacos
ENSSDUG00000014528	REXO5	97	33.942	ENSVVUG00000023257	REXO5	96	33.863	Vulpes_vulpes
ENSSDUG00000014528	REXO5	93	33.938	ENSXETG00000016735	rexo5	97	33.808	Xenopus_tropicalis
ENSSDUG00000014528	REXO5	93	45.943	ENSXCOG00000015997	REXO5	95	46.899	Xiphophorus_couchianus
ENSSDUG00000014528	REXO5	100	60.048	ENSXMAG00000014770	REXO5	98	60.924	Xiphophorus_maculatus