EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014540 (Gene tree)
Gene ID: 111230696
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7364 bases
Position: chrBDQW01000278.1:663645-671008
Accession: 111230696
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020007	zf-C2H2	PF00096.26	2.3e-33	1	6
ENSSDUP00000020007	zf-C2H2	PF00096.26	2.3e-33	2	6
ENSSDUP00000020007	zf-C2H2	PF00096.26	2.3e-33	3	6
ENSSDUP00000020007	zf-C2H2	PF00096.26	2.3e-33	4	6
ENSSDUP00000020007	zf-C2H2	PF00096.26	2.3e-33	5	6
ENSSDUP00000020007	zf-C2H2	PF00096.26	2.3e-33	6	6
ENSSDUP00000020007	zf-met	PF12874.7	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020360	-	2547	XM_022757513	ENSSDUP00000020007	848 (aa)	XP_022613234	-

Gene Model

Click here to download ENSSDUG00000014540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014540	znf341	50	31.019	ENSSDUG00000007336	-	94	40.984
ENSSDUG00000014540	znf341	57	36.765	ENSSDUG00000000799	-	71	36.765
ENSSDUG00000014540	znf341	51	33.163	ENSSDUG00000023764	-	88	46.939
ENSSDUG00000014540	znf341	54	30.058	ENSSDUG00000015254	-	82	46.939
ENSSDUG00000014540	znf341	50	38.571	ENSSDUG00000008329	-	79	38.571
ENSSDUG00000014540	znf341	59	47.059	ENSSDUG00000019932	ZNF319	90	32.558
ENSSDUG00000014540	znf341	55	37.500	ENSSDUG00000013904	-	69	37.500
ENSSDUG00000014540	znf341	51	31.183	ENSSDUG00000006463	-	89	31.667
ENSSDUG00000014540	znf341	50	46.000	ENSSDUG00000023765	-	85	46.000
ENSSDUG00000014540	znf341	51	30.952	ENSSDUG00000009534	-	66	30.952
ENSSDUG00000014540	znf341	53	32.184	ENSSDUG00000000705	-	63	32.184
ENSSDUG00000014540	znf341	50	34.158	ENSSDUG00000004835	-	80	30.267
ENSSDUG00000014540	znf341	51	34.337	ENSSDUG00000009601	-	86	44.000
ENSSDUG00000014540	znf341	55	37.500	ENSSDUG00000020397	prdm5	79	37.500
ENSSDUG00000014540	znf341	56	39.130	ENSSDUG00000021415	si:ch211-216l23.1	60	39.167
ENSSDUG00000014540	znf341	53	36.496	ENSSDUG00000015622	-	71	36.496
ENSSDUG00000014540	znf341	53	37.017	ENSSDUG00000004089	-	97	38.596
ENSSDUG00000014540	znf341	51	39.200	ENSSDUG00000004650	-	95	39.200
ENSSDUG00000014540	znf341	52	53.061	ENSSDUG00000011170	znf236	69	53.061
ENSSDUG00000014540	znf341	54	42.857	ENSSDUG00000022412	znf648	64	42.857
ENSSDUG00000014540	znf341	53	31.471	ENSSDUG00000009577	-	76	35.938
ENSSDUG00000014540	znf341	51	30.435	ENSSDUG00000008943	-	82	34.483
ENSSDUG00000014540	znf341	50	30.556	ENSSDUG00000006740	-	82	44.898
ENSSDUG00000014540	znf341	50	38.028	ENSSDUG00000000695	-	77	38.028
ENSSDUG00000014540	znf341	58	38.983	ENSSDUG00000005401	-	88	32.646
ENSSDUG00000014540	znf341	50	45.098	ENSSDUG00000000946	-	97	48.980
ENSSDUG00000014540	znf341	51	40.678	ENSSDUG00000020788	-	66	38.889
ENSSDUG00000014540	znf341	52	38.028	ENSSDUG00000020595	-	95	38.571
ENSSDUG00000014540	znf341	64	33.036	ENSSDUG00000001918	znf366	64	33.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014540	znf341	100	78.466	ENSAPOG00000016509	znf341	100	78.632	Acanthochromis_polyacanthus
ENSSDUG00000014540	znf341	100	79.064	ENSACIG00000016180	znf341	100	79.064	Amphilophus_citrinellus
ENSSDUG00000014540	znf341	100	78.197	ENSAOCG00000000960	znf341	98	78.197	Amphiprion_ocellaris
ENSSDUG00000014540	znf341	100	85.000	ENSAPEG00000006358	znf341	100	85.116	Amphiprion_percula
ENSSDUG00000014540	znf341	100	78.458	ENSATEG00000003196	znf341	100	78.141	Anabas_testudineus
ENSSDUG00000014540	znf341	100	75.345	ENSACLG00000014349	znf341	100	75.862	Astatotilapia_calliptera
ENSSDUG00000014540	znf341	84	72.554	ENSAMXG00000016921	znf341	97	69.560	Astyanax_mexicanus
ENSSDUG00000014540	znf341	99	73.239	ENSCSEG00000003536	znf341	99	72.802	Cynoglossus_semilaevis
ENSSDUG00000014540	znf341	95	72.800	ENSCVAG00000016325	znf341	94	75.572	Cyprinodon_variegatus
ENSSDUG00000014540	znf341	92	67.419	ENSDARG00000103725	znf341	96	68.869	Danio_rerio
ENSSDUG00000014540	znf341	92	73.871	ENSELUG00000018438	znf341	97	74.241	Esox_lucius
ENSSDUG00000014540	znf341	100	71.201	ENSFHEG00000009763	znf341	99	74.567	Fundulus_heteroclitus
ENSSDUG00000014540	znf341	100	71.030	ENSGAFG00000020131	znf341	100	71.137	Gambusia_affinis
ENSSDUG00000014540	znf341	100	75.372	ENSHBUG00000012828	znf341	100	75.780	Haplochromis_burtoni
ENSSDUG00000014540	znf341	95	78.329	ENSHCOG00000004879	znf341	98	79.229	Hippocampus_comes
ENSSDUG00000014540	znf341	89	68.408	ENSIPUG00000002075	znf341	97	67.537	Ictalurus_punctatus
ENSSDUG00000014540	znf341	100	72.899	ENSKMAG00000006686	znf341	100	72.689	Kryptolebias_marmoratus
ENSSDUG00000014540	znf341	100	76.155	ENSLBEG00000016666	znf341	100	75.761	Labrus_bergylta
ENSSDUG00000014540	znf341	98	66.361	ENSLOCG00000000947	znf341	92	72.529	Lepisosteus_oculatus
ENSSDUG00000014540	znf341	100	95.706	ENSMAMG00000008000	znf341	100	79.167	Mastacembelus_armatus
ENSSDUG00000014540	znf341	100	75.452	ENSMZEG00005021851	znf341	100	75.970	Maylandia_zebra
ENSSDUG00000014540	znf341	91	77.806	ENSMMOG00000019626	znf341	98	78.553	Mola_mola
ENSSDUG00000014540	znf341	61	61.059	ENSMODG00000002856	ZNF341	87	60.375	Monodelphis_domestica
ENSSDUG00000014540	znf341	85	81.784	ENSMALG00000006492	znf341	97	81.908	Monopterus_albus
ENSSDUG00000014540	znf341	100	79.030	ENSNBRG00000019550	znf341	100	78.579	Neolamprologus_brichardi
ENSSDUG00000014540	znf341	100	76.809	ENSONIG00000009210	znf341	96	84.171	Oreochromis_niloticus
ENSSDUG00000014540	znf341	96	75.721	ENSORLG00000000956	znf341	91	80.131	Oryzias_latipes
ENSSDUG00000014540	znf341	88	82.759	ENSORLG00020004162	znf341	100	69.264	Oryzias_latipes_hni
ENSSDUG00000014540	znf341	100	74.508	ENSORLG00015018360	znf341	100	73.702	Oryzias_latipes_hsok
ENSSDUG00000014540	znf341	100	71.872	ENSOMEG00000014403	znf341	100	71.383	Oryzias_melastigma
ENSSDUG00000014540	znf341	98	68.750	ENSPKIG00000023946	znf341	90	72.258	Paramormyrops_kingsleyae
ENSSDUG00000014540	znf341	100	71.228	ENSPMGG00000014849	znf341	100	70.418	Periophthalmus_magnuspinnatus
ENSSDUG00000014540	znf341	100	70.582	ENSPFOG00000013875	znf341	98	78.058	Poecilia_formosa
ENSSDUG00000014540	znf341	100	70.690	ENSPLAG00000014192	znf341	93	74.734	Poecilia_latipinna
ENSSDUG00000014540	znf341	100	70.842	ENSPMEG00000020155	znf341	93	74.793	Poecilia_mexicana
ENSSDUG00000014540	znf341	100	71.227	ENSPREG00000001388	znf341	93	75.238	Poecilia_reticulata
ENSSDUG00000014540	znf341	100	81.040	ENSPNYG00000015106	znf341	100	80.694	Pundamilia_nyererei
ENSSDUG00000014540	znf341	97	66.667	ENSPNAG00000027229	znf341	96	69.593	Pygocentrus_nattereri
ENSSDUG00000014540	znf341	84	76.171	ENSSFOG00015014678	znf341	89	72.739	Scleropages_formosus
ENSSDUG00000014540	znf341	100	95.092	ENSSMAG00000006473	znf341	94	95.092	Scophthalmus_maximus
ENSSDUG00000014540	znf341	100	97.527	ENSSLDG00000019660	znf341	100	97.527	Seriola_lalandi_dorsalis
ENSSDUG00000014540	znf341	95	74.668	ENSTRUG00000011385	znf341	99	75.028	Takifugu_rubripes
ENSSDUG00000014540	znf341	83	80.863	ENSTNIG00000005051	znf341	100	80.863	Tetraodon_nigroviridis
ENSSDUG00000014540	znf341	71	82.343	ENSXCOG00000000036	znf341	91	81.064	Xiphophorus_couchianus
ENSSDUG00000014540	znf341	100	72.091	ENSXMAG00000014133	znf341	100	72.091	Xiphophorus_maculatus