EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000014543 (Gene tree)
Gene ID
111218947
Gene Symbol
apobec2b
Alias
apo2b
Full Name
probable C->U-editing enzyme APOBEC-2
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
1898 bases
Position
chrBDQW01000056.1:7272917-7274814
Accession
111218947
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000019992APOBEC_NPF08210.112.4e-4511
ENSSDUP00000019992APOBEC_CPF05240.142.7e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000020345-807XM_022741448ENSSDUP00000019992268 (aa)XP_022597169UPI000BBE7BD4
Gene Model
Click here to download ENSSDUG00000014543's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014543's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000014543apobec2b6233.529ENSSDUG00000009894aicda8533.529
ENSSDUG00000014543apobec2b10051.471ENSSDUG00000007013apobec2a8757.273
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000014543apobec2b6959.067ENSG00000124701APOBEC28659.067Homo_sapiens
ENSSDUG00000014543apobec2b10087.687ENSAPOG00000019390apobec2b10087.687Acanthochromis_polyacanthus
ENSSDUG00000014543apobec2b6556.111ENSAMEG00000004467APOBEC27156.111Ailuropoda_melanoleuca
ENSSDUG00000014543apobec2b7153.646ENSACIG00000016370apobec2a7653.333Amphilophus_citrinellus
ENSSDUG00000014543apobec2b10082.836ENSACIG00000002472APOBEC210074.627Amphilophus_citrinellus
ENSSDUG00000014543apobec2b9154.032ENSAOCG00000003291apobec2a8557.619Amphiprion_ocellaris
ENSSDUG00000014543apobec2b10088.060ENSAOCG00000023355apobec2b10088.060Amphiprion_ocellaris
ENSSDUG00000014543apobec2b10087.313ENSAPEG00000004591apobec2b10087.313Amphiprion_percula
ENSSDUG00000014543apobec2b9151.220ENSAPEG00000003630apobec2a8956.621Amphiprion_percula
ENSSDUG00000014543apobec2b10089.219ENSATEG00000023043APOBEC210089.219Anabas_testudineus
ENSSDUG00000014543apobec2b8851.681ENSATEG00000000956apobec2a9858.286Anabas_testudineus
ENSSDUG00000014543apobec2b7952.995ENSAPLG00000002895APOBEC29652.995Anas_platyrhynchos
ENSSDUG00000014543apobec2b7051.031ENSACAG00000016506APOBEC29553.933Anolis_carolinensis
ENSSDUG00000014543apobec2b6959.067ENSANAG00000026993APOBEC28659.067Aotus_nancymaae
ENSSDUG00000014543apobec2b6459.302ENSACLG00000026736-9759.302Astatotilapia_calliptera
ENSSDUG00000014543apobec2b10082.463ENSACLG00000007634APOBEC210082.463Astatotilapia_calliptera
ENSSDUG00000014543apobec2b9848.889ENSAMXG00000042992apobec2a7561.257Astyanax_mexicanus
ENSSDUG00000014543apobec2b8260.000ENSAMXG00000015966apobec2b8159.912Astyanax_mexicanus
ENSSDUG00000014543apobec2b6958.549ENSBTAG00000005974APOBEC27353.304Bos_taurus
ENSSDUG00000014543apobec2b6959.067ENSCJAG00000004063APOBEC29954.054Callithrix_jacchus
ENSSDUG00000014543apobec2b6958.549ENSCAFG00000001575APOBEC28658.549Canis_familiaris
ENSSDUG00000014543apobec2b6958.549ENSCAFG00020008306APOBEC28658.549Canis_lupus_dingo
ENSSDUG00000014543apobec2b7555.288ENSCHIG00000026348APOBEC29953.153Capra_hircus
ENSSDUG00000014543apobec2b6959.067ENSTSYG00000008206APOBEC29952.889Carlito_syrichta
ENSSDUG00000014543apobec2b6958.031ENSCAPG00000015084APOBEC29952.000Cavia_aperea
ENSSDUG00000014543apobec2b6958.031ENSCPOG00000036103APOBEC29952.000Cavia_porcellus
ENSSDUG00000014543apobec2b6959.067ENSCCAG00000033987APOBEC28659.067Cebus_capucinus
ENSSDUG00000014543apobec2b6959.585ENSCATG00000010691APOBEC28659.585Cercocebus_atys
ENSSDUG00000014543apobec2b6958.549ENSCLAG00000013817APOBEC28558.549Chinchilla_lanigera
ENSSDUG00000014543apobec2b6959.585ENSCSAG00000011177APOBEC29954.054Chlorocebus_sabaeus
ENSSDUG00000014543apobec2b6556.667ENSCHOG00000008930APOBEC210056.667Choloepus_hoffmanni
ENSSDUG00000014543apobec2b6755.676ENSCPBG00000017469APOBEC29851.613Chrysemys_picta_bellii
ENSSDUG00000014543apobec2b6959.585ENSCANG00000035072APOBEC29954.054Colobus_angolensis_palliatus
ENSSDUG00000014543apobec2b7653.953ENSCGRG00001014983Apobec29653.953Cricetulus_griseus_chok1gshd
ENSSDUG00000014543apobec2b7653.953ENSCGRG00000007835Apobec29653.953Cricetulus_griseus_crigri
ENSSDUG00000014543apobec2b9151.969ENSCSEG00000020201apobec2a8954.911Cynoglossus_semilaevis
ENSSDUG00000014543apobec2b7076.596ENSCSEG00000000690-7773.039Cynoglossus_semilaevis
ENSSDUG00000014543apobec2b10077.239ENSCVAG00000012342apobec2b10076.866Cyprinodon_variegatus
ENSSDUG00000014543apobec2b6965.957ENSDARG00000018881apobec2a8361.261Danio_rerio
ENSSDUG00000014543apobec2b8461.373ENSDARG00000113992apobec2b8261.404Danio_rerio
ENSSDUG00000014543apobec2b6942.640ENSDNOG00000033914APOBEC29940.086Dasypus_novemcinctus
ENSSDUG00000014543apobec2b6956.995ENSDORG00000006447Apobec28456.995Dipodomys_ordii
ENSSDUG00000014543apobec2b6957.513ENSETEG00000000624APOBEC28457.513Echinops_telfairi
ENSSDUG00000014543apobec2b5957.143ENSEASG00005002937APOBEC28457.143Equus_asinus_asinus
ENSSDUG00000014543apobec2b6958.031ENSECAG00000006576APOBEC28658.031Equus_caballus
ENSSDUG00000014543apobec2b6958.549ENSEEUG00000006046APOBEC29953.604Erinaceus_europaeus
ENSSDUG00000014543apobec2b7062.434ENSELUG00000003736apobec2a7358.937Esox_lucius
ENSSDUG00000014543apobec2b6958.031ENSFCAG00000004108APOBEC28658.031Felis_catus
ENSSDUG00000014543apobec2b6848.936ENSFALG00000003910APOBEC29745.161Ficedula_albicollis
ENSSDUG00000014543apobec2b6958.031ENSFDAG00000006015APOBEC28658.031Fukomys_damarensis
ENSSDUG00000014543apobec2b7982.075ENSFHEG00000005492apobec2b9481.448Fundulus_heteroclitus
ENSSDUG00000014543apobec2b6559.091ENSGMOG00000007028apobec2a10059.091Gadus_morhua
ENSSDUG00000014543apobec2b7772.249ENSGMOG00000006819apobec2b9466.957Gadus_morhua
ENSSDUG00000014543apobec2b7952.752ENSGALG00000003226APOBEC29852.752Gallus_gallus
ENSSDUG00000014543apobec2b10079.104ENSGAFG00000007634apobec2b7283.258Gambusia_affinis
ENSSDUG00000014543apobec2b6959.043ENSGACG00000011671apobec2a10059.043Gasterosteus_aculeatus
ENSSDUG00000014543apobec2b10078.358ENSGACG00000009663apobec2b9689.815Gasterosteus_aculeatus
ENSSDUG00000014543apobec2b6755.676ENSGAGG00000010347APOBEC29851.152Gopherus_agassizii
ENSSDUG00000014543apobec2b6959.067ENSGGOG00000001099APOBEC29953.070Gorilla_gorilla
ENSSDUG00000014543apobec2b8355.794ENSHBUG00000015890apobec2a9256.332Haplochromis_burtoni
ENSSDUG00000014543apobec2b10081.343ENSHBUG00000005993apobec2b10081.343Haplochromis_burtoni
ENSSDUG00000014543apobec2b6957.513ENSHGLG00000017169APOBEC29952.889Heterocephalus_glaber_female
ENSSDUG00000014543apobec2b6957.513ENSHGLG00100019442APOBEC29952.889Heterocephalus_glaber_male
ENSSDUG00000014543apobec2b10077.037ENSHCOG00000002712APOBEC210077.037Hippocampus_comes
ENSSDUG00000014543apobec2b7058.947ENSHCOG00000020319apobec2a7858.947Hippocampus_comes
ENSSDUG00000014543apobec2b7956.422ENSIPUG00000017355apobec2a6455.752Ictalurus_punctatus
ENSSDUG00000014543apobec2b10057.762ENSIPUG00000013784Apobec28460.793Ictalurus_punctatus
ENSSDUG00000014543apobec2b6959.067ENSSTOG00000023643APOBEC28659.067Ictidomys_tridecemlineatus
ENSSDUG00000014543apobec2b6957.513ENSJJAG00000009733Apobec29952.703Jaculus_jaculus
ENSSDUG00000014543apobec2b9978.652ENSKMAG00000020631apobec2b9978.277Kryptolebias_marmoratus
ENSSDUG00000014543apobec2b9151.406ENSLBEG00000025214apobec2a9354.911Labrus_bergylta
ENSSDUG00000014543apobec2b10075.357ENSLBEG00000009422-10078.292Labrus_bergylta
ENSSDUG00000014543apobec2b8356.889ENSLACG00000015985APOBEC29458.636Latimeria_chalumnae
ENSSDUG00000014543apobec2b7363.500ENSLOCG00000012415apobec2b8159.735Lepisosteus_oculatus
ENSSDUG00000014543apobec2b7556.731ENSLAFG00000016563APOBEC29954.505Loxodonta_africana
ENSSDUG00000014543apobec2b6959.585ENSMFAG00000044645APOBEC29954.054Macaca_fascicularis
ENSSDUG00000014543apobec2b6959.585ENSMMUG00000021171APOBEC29954.054Macaca_mulatta
ENSSDUG00000014543apobec2b6959.585ENSMNEG00000045497APOBEC29954.054Macaca_nemestrina
ENSSDUG00000014543apobec2b6959.585ENSMLEG00000028328APOBEC29954.054Mandrillus_leucophaeus
ENSSDUG00000014543apobec2b10084.926ENSMAMG00000007926APOBEC210083.456Mastacembelus_armatus
ENSSDUG00000014543apobec2b9353.543ENSMAMG00000023685apobec2a8459.259Mastacembelus_armatus
ENSSDUG00000014543apobec2b8255.652ENSMZEG00005005240-9855.652Maylandia_zebra
ENSSDUG00000014543apobec2b10082.836ENSMZEG00005027159APOBEC210082.836Maylandia_zebra
ENSSDUG00000014543apobec2b7952.752ENSMGAG00000010173APOBEC29455.866Meleagris_gallopavo
ENSSDUG00000014543apobec2b6958.031ENSMAUG00000011016Apobec29953.153Mesocricetus_auratus
ENSSDUG00000014543apobec2b6960.104ENSMICG00000043339APOBEC29954.505Microcebus_murinus
ENSSDUG00000014543apobec2b6958.549ENSMOCG00000001904Apobec29953.604Microtus_ochrogaster
ENSSDUG00000014543apobec2b10080.224ENSMMOG00000008681apobec2b10079.104Mola_mola
ENSSDUG00000014543apobec2b6955.729ENSMODG00000013090APOBEC28755.729Monodelphis_domestica
ENSSDUG00000014543apobec2b10080.370ENSMALG00000013779APOBEC210079.630Monopterus_albus
ENSSDUG00000014543apobec2b8853.361ENSMALG00000020523apobec2a8855.708Monopterus_albus
ENSSDUG00000014543apobec2b6957.513MGP_CAROLIEiJ_G0021727Apobec29952.703Mus_caroli
ENSSDUG00000014543apobec2b6957.513ENSMUSG00000040694Apobec29952.703Mus_musculus
ENSSDUG00000014543apobec2b6957.513MGP_PahariEiJ_G0020716Apobec29952.703Mus_pahari
ENSSDUG00000014543apobec2b6959.067ENSMPUG00000013691APOBEC29953.017Mustela_putorius_furo
ENSSDUG00000014543apobec2b6957.513ENSMLUG00000011327APOBEC29951.316Myotis_lucifugus
ENSSDUG00000014543apobec2b6956.995ENSNGAG00000013717Apobec29952.252Nannospalax_galili
ENSSDUG00000014543apobec2b7957.746ENSNBRG00000021776apobec2a8757.674Neolamprologus_brichardi
ENSSDUG00000014543apobec2b10082.463ENSNBRG00000018806apobec2b8982.463Neolamprologus_brichardi
ENSSDUG00000014543apobec2b6959.067ENSNLEG00000005057APOBEC28659.067Nomascus_leucogenys
ENSSDUG00000014543apobec2b6956.250ENSMEUG00000011623APOBEC28756.250Notamacropus_eugenii
ENSSDUG00000014543apobec2b6958.549ENSOPRG00000014808APOBEC29853.363Ochotona_princeps
ENSSDUG00000014543apobec2b6958.549ENSODEG00000016183APOBEC28458.549Octodon_degus
ENSSDUG00000014543apobec2b10083.955ENSONIG00000012289apobec2b10083.955Oreochromis_niloticus
ENSSDUG00000014543apobec2b8356.652ENSONIG00000004644-9257.205Oreochromis_niloticus
ENSSDUG00000014543apobec2b6154.762ENSOANG00000000824APOBEC29853.333Ornithorhynchus_anatinus
ENSSDUG00000014543apobec2b6958.549ENSOCUG00000028008APOBEC28558.549Oryctolagus_cuniculus
ENSSDUG00000014543apobec2b7759.524ENSORLG00000010752apobec2a8859.524Oryzias_latipes
ENSSDUG00000014543apobec2b10080.224ENSORLG00000022372APOBEC28384.163Oryzias_latipes
ENSSDUG00000014543apobec2b7759.524ENSORLG00020004153apobec2a8859.524Oryzias_latipes_hni
ENSSDUG00000014543apobec2b10080.597ENSORLG00020006164APOBEC28384.615Oryzias_latipes_hni
ENSSDUG00000014543apobec2b10080.224ENSORLG00015022089-8384.615Oryzias_latipes_hsok
ENSSDUG00000014543apobec2b7759.524ENSORLG00015021781apobec2a8859.524Oryzias_latipes_hsok
ENSSDUG00000014543apobec2b10081.716ENSOMEG00000015449APOBEC210081.343Oryzias_melastigma
ENSSDUG00000014543apobec2b8654.701ENSOMEG00000001311apobec2a8858.962Oryzias_melastigma
ENSSDUG00000014543apobec2b7853.153ENSOGAG00000002632APOBEC29953.153Otolemur_garnettii
ENSSDUG00000014543apobec2b7555.769ENSOARG00000000820APOBEC29953.604Ovis_aries
ENSSDUG00000014543apobec2b6959.067ENSPPAG00000035598APOBEC29953.070Pan_paniscus
ENSSDUG00000014543apobec2b6958.031ENSPPRG00000008530APOBEC28658.031Panthera_pardus
ENSSDUG00000014543apobec2b6958.031ENSPTIG00000011084APOBEC28658.031Panthera_tigris_altaica
ENSSDUG00000014543apobec2b6959.067ENSPTRG00000029679APOBEC29953.070Pan_troglodytes
ENSSDUG00000014543apobec2b6959.585ENSPANG00000007121APOBEC29954.054Papio_anubis
ENSSDUG00000014543apobec2b8760.996ENSPKIG00000004741apobec2b8361.842Paramormyrops_kingsleyae
ENSSDUG00000014543apobec2b8955.556ENSPKIG00000005395apobec2a7964.948Paramormyrops_kingsleyae
ENSSDUG00000014543apobec2b6757.297ENSPSIG00000013480APOBEC29852.000Pelodiscus_sinensis
ENSSDUG00000014543apobec2b10076.449ENSPMGG00000002686APOBEC26580.995Periophthalmus_magnuspinnatus
ENSSDUG00000014543apobec2b8457.642ENSPMGG00000004044apobec2a9257.642Periophthalmus_magnuspinnatus
ENSSDUG00000014543apobec2b6958.031ENSPEMG00000005724Apobec29654.419Peromyscus_maniculatus_bairdii
ENSSDUG00000014543apobec2b10077.985ENSPFOG00000001216apobec2b10078.358Poecilia_formosa
ENSSDUG00000014543apobec2b10077.239ENSPLAG00000002074apobec2b10077.612Poecilia_latipinna
ENSSDUG00000014543apobec2b10078.358ENSPMEG00000017537apobec2b10078.731Poecilia_mexicana
ENSSDUG00000014543apobec2b10079.104ENSPREG00000020060apobec2b8779.478Poecilia_reticulata
ENSSDUG00000014543apobec2b6958.549ENSPPYG00000016586APOBEC28658.549Pongo_abelii
ENSSDUG00000014543apobec2b6959.686ENSPCAG00000011433APOBEC210059.686Procavia_capensis
ENSSDUG00000014543apobec2b6959.067ENSPCOG00000026935APOBEC29953.604Propithecus_coquereli
ENSSDUG00000014543apobec2b6958.549ENSPVAG00000008316APOBEC28658.549Pteropus_vampyrus
ENSSDUG00000014543apobec2b10082.836ENSPNYG00000016747apobec2b10082.836Pundamilia_nyererei
ENSSDUG00000014543apobec2b8059.633ENSPNAG00000013666apobec2b8159.556Pygocentrus_nattereri
ENSSDUG00000014543apobec2b9855.094ENSPNAG00000010382apobec2a7862.019Pygocentrus_nattereri
ENSSDUG00000014543apobec2b6957.513ENSRNOG00000012303Apobec29952.703Rattus_norvegicus
ENSSDUG00000014543apobec2b6959.585ENSRBIG00000044756APOBEC29954.054Rhinopithecus_bieti
ENSSDUG00000014543apobec2b6959.585ENSRROG00000030082APOBEC29954.054Rhinopithecus_roxellana
ENSSDUG00000014543apobec2b6959.067ENSSBOG00000028496APOBEC28659.067Saimiri_boliviensis_boliviensis
ENSSDUG00000014543apobec2b6957.292ENSSHAG00000017771APOBEC28657.292Sarcophilus_harrisii
ENSSDUG00000014543apobec2b8663.519ENSSFOG00015022920apobec27769.194Scleropages_formosus
ENSSDUG00000014543apobec2b6257.396ENSSFOG00015005437-7157.396Scleropages_formosus
ENSSDUG00000014543apobec2b8953.252ENSSMAG00000001011apobec2a6556.621Scophthalmus_maximus
ENSSDUG00000014543apobec2b10083.636ENSSMAG00000005110APOBEC210084.000Scophthalmus_maximus
ENSSDUG00000014543apobec2b100100.000ENSSLDG00000003321apobec2b100100.000Seriola_lalandi_dorsalis
ENSSDUG00000014543apobec2b8854.508ENSSLDG00000020199apobec2a8856.696Seriola_lalandi_dorsalis
ENSSDUG00000014543apobec2b6452.222ENSSPUG00000010839APOBEC28752.222Sphenodon_punctatus
ENSSDUG00000014543apobec2b10088.060ENSSPAG00000005253apobec2b10088.060Stegastes_partitus
ENSSDUG00000014543apobec2b9151.807ENSSPAG00000016299-8259.500Stegastes_partitus
ENSSDUG00000014543apobec2b7556.250ENSSSCG00000036018APOBEC29356.250Sus_scrofa
ENSSDUG00000014543apobec2b6857.979ENSTGUG00000018533APOBEC29853.456Taeniopygia_guttata
ENSSDUG00000014543apobec2b7456.931ENSTRUG00000009123apobec2a8256.931Takifugu_rubripes
ENSSDUG00000014543apobec2b10075.746ENSTRUG00000012839apobec2b8479.638Takifugu_rubripes
ENSSDUG00000014543apobec2b10077.239ENSTNIG00000015038apobec2b8480.995Tetraodon_nigroviridis
ENSSDUG00000014543apobec2b6958.549ENSTBEG00000003553APOBEC29953.604Tupaia_belangeri
ENSSDUG00000014543apobec2b6857.368ENSTTRG00000013392APOBEC28557.368Tursiops_truncatus
ENSSDUG00000014543apobec2b6959.067ENSUAMG00000027667APOBEC28559.067Ursus_americanus
ENSSDUG00000014543apobec2b6958.549ENSVVUG00000026617APOBEC28658.549Vulpes_vulpes
ENSSDUG00000014543apobec2b7448.869ENSXETG00000008007apobec29448.869Xenopus_tropicalis
ENSSDUG00000014543apobec2b10076.471ENSXCOG00000007398apobec2b10077.574Xiphophorus_couchianus
ENSSDUG00000014543apobec2b10076.103ENSXMAG00000008134apobec2b10077.206Xiphophorus_maculatus

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