EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000014618 (Gene tree)
Gene ID: 111237008
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6118 bases
Position: chrBDQW01000800.1:811795-817912
Accession: 111237008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020108	B3_4	PF03483.17	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020461	-	2693	XM_022765939	ENSSDUP00000020108	559 (aa)	XP_022621660	UPI000BBE8110

Gene Model

Click here to download ENSSDUG00000014618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014618	lrrc47	99	53.472	ENSG00000130764	LRRC47	99	52.850	Homo_sapiens
ENSSDUG00000014618	lrrc47	100	87.120	ENSAPOG00000019553	lrrc47	100	87.120	Acanthochromis_polyacanthus
ENSSDUG00000014618	lrrc47	76	57.306	ENSAMEG00000009152	LRRC47	94	56.193	Ailuropoda_melanoleuca
ENSSDUG00000014618	lrrc47	67	61.880	ENSAPLG00000003167	LRRC47	97	61.497	Anas_platyrhynchos
ENSSDUG00000014618	lrrc47	65	61.580	ENSACAG00000008267	LRRC47	97	60.763	Anolis_carolinensis
ENSSDUG00000014618	lrrc47	99	52.778	ENSANAG00000025576	LRRC47	99	52.062	Aotus_nancymaae
ENSSDUG00000014618	lrrc47	99	53.043	ENSBTAG00000004738	LRRC47	98	52.513	Bos_taurus
ENSSDUG00000014618	lrrc47	99	54.261	ENSCAFG00000019492	LRRC47	97	53.565	Canis_familiaris
ENSSDUG00000014618	lrrc47	99	54.450	ENSCAFG00020009667	LRRC47	99	53.752	Canis_lupus_dingo
ENSSDUG00000014618	lrrc47	99	53.752	ENSCHIG00000022607	LRRC47	98	53.217	Capra_hircus
ENSSDUG00000014618	lrrc47	96	52.432	ENSTSYG00000009326	LRRC47	97	52.548	Carlito_syrichta
ENSSDUG00000014618	lrrc47	66	58.530	ENSCAPG00000016517	LRRC47	97	59.511	Cavia_aperea
ENSSDUG00000014618	lrrc47	99	52.759	ENSCPOG00000014931	LRRC47	93	53.004	Cavia_porcellus
ENSSDUG00000014618	lrrc47	99	52.348	ENSCCAG00000024895	LRRC47	99	51.641	Cebus_capucinus
ENSSDUG00000014618	lrrc47	99	53.993	ENSCATG00000029337	LRRC47	99	53.859	Cercocebus_atys
ENSSDUG00000014618	lrrc47	97	54.529	ENSCLAG00000006093	LRRC47	97	54.174	Chinchilla_lanigera
ENSSDUG00000014618	lrrc47	99	54.167	ENSCSAG00000000727	LRRC47	99	54.031	Chlorocebus_sabaeus
ENSSDUG00000014618	lrrc47	99	51.597	ENSCPBG00000019404	LRRC47	98	51.525	Chrysemys_picta_bellii
ENSSDUG00000014618	lrrc47	79	56.209	ENSCANG00000030701	LRRC47	96	55.773	Colobus_angolensis_palliatus
ENSSDUG00000014618	lrrc47	99	53.659	ENSCGRG00001015159	Lrrc47	88	53.779	Cricetulus_griseus_chok1gshd
ENSSDUG00000014618	lrrc47	66	59.103	ENSCGRG00000017336	Lrrc47	97	59.836	Cricetulus_griseus_crigri
ENSSDUG00000014618	lrrc47	100	80.322	ENSCSEG00000006217	lrrc47	96	80.322	Cynoglossus_semilaevis
ENSSDUG00000014618	lrrc47	66	59.416	ENSDORG00000016594	Lrrc47	97	60.598	Dipodomys_ordii
ENSSDUG00000014618	lrrc47	97	55.752	ENSEASG00005021788	LRRC47	97	55.300	Equus_asinus_asinus
ENSSDUG00000014618	lrrc47	97	55.752	ENSECAG00000022472	LRRC47	88	54.737	Equus_caballus
ENSSDUG00000014618	lrrc47	100	72.310	ENSELUG00000017544	lrrc47	98	73.192	Esox_lucius
ENSSDUG00000014618	lrrc47	89	54.510	ENSFCAG00000011632	LRRC47	89	55.030	Felis_catus
ENSSDUG00000014618	lrrc47	70	60.660	ENSFALG00000009631	LRRC47	96	57.968	Ficedula_albicollis
ENSSDUG00000014618	lrrc47	100	68.917	ENSGMOG00000015674	lrrc47	99	70.160	Gadus_morhua
ENSSDUG00000014618	lrrc47	99	50.877	ENSGALG00000050995	LRRC47	98	51.159	Gallus_gallus
ENSSDUG00000014618	lrrc47	100	78.750	ENSGACG00000005550	lrrc47	99	78.393	Gasterosteus_aculeatus
ENSSDUG00000014618	lrrc47	99	50.842	ENSGAGG00000022584	LRRC47	98	51.613	Gopherus_agassizii
ENSSDUG00000014618	lrrc47	99	53.646	ENSGGOG00000015571	LRRC47	99	53.022	Gorilla_gorilla
ENSSDUG00000014618	lrrc47	99	53.043	ENSHGLG00000018278	LRRC47	95	53.043	Heterocephalus_glaber_female
ENSSDUG00000014618	lrrc47	70	59.305	ENSHGLG00100008507	LRRC47	99	58.809	Heterocephalus_glaber_male
ENSSDUG00000014618	lrrc47	100	77.818	ENSHCOG00000006348	lrrc47	98	78.533	Hippocampus_comes
ENSSDUG00000014618	lrrc47	99	53.819	ENSSTOG00000027559	LRRC47	99	53.806	Ictidomys_tridecemlineatus
ENSSDUG00000014618	lrrc47	99	54.957	ENSJJAG00000017474	Lrrc47	96	54.261	Jaculus_jaculus
ENSSDUG00000014618	lrrc47	100	83.721	ENSKMAG00000003414	lrrc47	100	83.721	Kryptolebias_marmoratus
ENSSDUG00000014618	lrrc47	99	54.087	ENSLAFG00000011657	LRRC47	98	54.340	Loxodonta_africana
ENSSDUG00000014618	lrrc47	99	42.832	ENSMFAG00000045730	LRRC47	88	53.975	Macaca_fascicularis
ENSSDUG00000014618	lrrc47	99	53.333	ENSMNEG00000042488	LRRC47	98	53.368	Macaca_nemestrina
ENSSDUG00000014618	lrrc47	77	56.027	ENSMLEG00000043735	LRRC47	90	56.125	Mandrillus_leucophaeus
ENSSDUG00000014618	lrrc47	99	54.196	ENSMAUG00000021337	Lrrc47	96	54.321	Mesocricetus_auratus
ENSSDUG00000014618	lrrc47	99	52.522	ENSMICG00000026816	LRRC47	99	53.195	Microcebus_murinus
ENSSDUG00000014618	lrrc47	99	55.026	ENSMOCG00000021279	Lrrc47	97	54.643	Microtus_ochrogaster
ENSSDUG00000014618	lrrc47	100	83.005	ENSMMOG00000017007	lrrc47	100	83.005	Mola_mola
ENSSDUG00000014618	lrrc47	99	43.633	ENSMODG00000006554	LRRC47	98	52.174	Monodelphis_domestica
ENSSDUG00000014618	lrrc47	97	54.965	MGP_CAROLIEiJ_G0026864	Lrrc47	97	54.610	Mus_caroli
ENSSDUG00000014618	lrrc47	97	55.319	ENSMUSG00000029028	Lrrc47	97	54.787	Mus_musculus
ENSSDUG00000014618	lrrc47	97	54.787	MGP_PahariEiJ_G0029212	Lrrc47	97	54.225	Mus_pahari
ENSSDUG00000014618	lrrc47	97	55.142	MGP_SPRETEiJ_G0027857	Lrrc47	96	54.610	Mus_spretus
ENSSDUG00000014618	lrrc47	66	58.201	ENSMPUG00000007321	LRRC47	75	58.201	Mustela_putorius_furo
ENSSDUG00000014618	lrrc47	99	52.807	ENSNGAG00000022153	Lrrc47	98	53.147	Nannospalax_galili
ENSSDUG00000014618	lrrc47	99	52.613	ENSNLEG00000008131	LRRC47	99	52.265	Nomascus_leucogenys
ENSSDUG00000014618	lrrc47	84	54.098	ENSODEG00000010882	LRRC47	93	53.484	Octodon_degus
ENSSDUG00000014618	lrrc47	97	82.037	ENSORLG00000002532	lrrc47	100	82.037	Oryzias_latipes
ENSSDUG00000014618	lrrc47	100	81.216	ENSORLG00020019601	lrrc47	100	81.216	Oryzias_latipes_hni
ENSSDUG00000014618	lrrc47	100	81.038	ENSORLG00015014040	lrrc47	100	81.038	Oryzias_latipes_hsok
ENSSDUG00000014618	lrrc47	100	81.216	ENSOMEG00000008989	lrrc47	100	81.216	Oryzias_melastigma
ENSSDUG00000014618	lrrc47	99	53.368	ENSOGAG00000001553	LRRC47	99	52.504	Otolemur_garnettii
ENSSDUG00000014618	lrrc47	99	51.130	ENSOARG00000015290	LRRC47	98	50.607	Ovis_aries
ENSSDUG00000014618	lrrc47	75	57.477	ENSPPAG00000036370	-	98	56.613	Pan_paniscus
ENSSDUG00000014618	lrrc47	99	52.348	ENSPPRG00000005261	LRRC47	98	52.522	Panthera_pardus
ENSSDUG00000014618	lrrc47	99	53.472	ENSPTRG00000000068	LRRC47	99	52.850	Pan_troglodytes
ENSSDUG00000014618	lrrc47	99	54.167	ENSPANG00000012437	LRRC47	99	54.031	Papio_anubis
ENSSDUG00000014618	lrrc47	66	62.334	ENSPSIG00000004196	LRRC47	97	62.634	Pelodiscus_sinensis
ENSSDUG00000014618	lrrc47	64	61.918	ENSPEMG00000021068	Lrrc47	97	60.929	Peromyscus_maniculatus_bairdii
ENSSDUG00000014618	lrrc47	99	56.021	ENSPCIG00000003638	LRRC47	98	55.478	Phascolarctos_cinereus
ENSSDUG00000014618	lrrc47	94	81.629	ENSPFOG00000000992	lrrc47	94	80.682	Poecilia_formosa
ENSSDUG00000014618	lrrc47	100	81.216	ENSPLAG00000008077	lrrc47	100	80.322	Poecilia_latipinna
ENSSDUG00000014618	lrrc47	100	81.038	ENSPMEG00000007367	lrrc47	100	80.143	Poecilia_mexicana
ENSSDUG00000014618	lrrc47	99	53.472	ENSPPYG00000001960	LRRC47	99	52.850	Pongo_abelii
ENSSDUG00000014618	lrrc47	99	53.472	ENSPCOG00000019161	LRRC47	98	53.460	Propithecus_coquereli
ENSSDUG00000014618	lrrc47	99	53.671	ENSPVAG00000009839	LRRC47	99	53.229	Pteropus_vampyrus
ENSSDUG00000014618	lrrc47	99	64.831	ENSPNAG00000017982	lrrc47	99	66.430	Pygocentrus_nattereri
ENSSDUG00000014618	lrrc47	97	55.142	ENSRNOG00000024796	Lrrc47	97	54.610	Rattus_norvegicus
ENSSDUG00000014618	lrrc47	99	54.167	ENSRBIG00000019437	LRRC47	99	54.031	Rhinopithecus_bieti
ENSSDUG00000014618	lrrc47	99	54.167	ENSRROG00000043182	LRRC47	99	54.031	Rhinopithecus_roxellana
ENSSDUG00000014618	lrrc47	79	55.947	ENSSBOG00000026334	LRRC47	92	54.967	Saimiri_boliviensis_boliviensis
ENSSDUG00000014618	lrrc47	99	50.865	ENSSHAG00000007360	LRRC47	98	49.483	Sarcophilus_harrisii
ENSSDUG00000014618	lrrc47	100	88.571	ENSSMAG00000009344	lrrc47	100	88.571	Scophthalmus_maximus
ENSSDUG00000014618	lrrc47	100	99.106	ENSSLDG00000018908	lrrc47	100	99.106	Seriola_lalandi_dorsalis
ENSSDUG00000014618	lrrc47	99	52.840	ENSSPUG00000010277	LRRC47	98	53.162	Sphenodon_punctatus
ENSSDUG00000014618	lrrc47	100	87.120	ENSSPAG00000005188	lrrc47	100	87.120	Stegastes_partitus
ENSSDUG00000014618	lrrc47	99	53.565	ENSSSCG00000039516	LRRC47	98	52.504	Sus_scrofa
ENSSDUG00000014618	lrrc47	72	59.901	ENSTGUG00000002737	LRRC47	96	61.013	Taeniopygia_guttata
ENSSDUG00000014618	lrrc47	100	79.606	ENSTRUG00000017696	lrrc47	100	79.606	Takifugu_rubripes
ENSSDUG00000014618	lrrc47	100	77.996	ENSTNIG00000010923	lrrc47	99	77.996	Tetraodon_nigroviridis
ENSSDUG00000014618	lrrc47	99	52.604	ENSTTRG00000011751	LRRC47	99	52.431	Tursiops_truncatus
ENSSDUG00000014618	lrrc47	89	53.565	ENSUAMG00000012080	LRRC47	98	53.346	Ursus_americanus
ENSSDUG00000014618	lrrc47	66	58.466	ENSUMAG00000010781	LRRC47	80	57.937	Ursus_maritimus
ENSSDUG00000014618	lrrc47	99	50.347	ENSVVUG00000027118	LRRC47	98	49.653	Vulpes_vulpes
ENSSDUG00000014618	lrrc47	97	58.333	ENSXETG00000006029	lrrc47	97	58.409	Xenopus_tropicalis
ENSSDUG00000014618	lrrc47	99	80.108	ENSXCOG00000002813	lrrc47	99	79.211	Xiphophorus_couchianus
ENSSDUG00000014618	lrrc47	99	80.935	ENSXMAG00000019386	lrrc47	100	79.856	Xiphophorus_maculatus