EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014675 (Gene tree)
Gene ID: 111228406
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6054 bases
Position: chrBDQW01000219.1:4090429-4096482
Accession: 111228406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020193	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSSDUP00000020175	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020530	-	3482	-	ENSSDUP00000020175	181 (aa)	-	-
ENSSDUT00000020575	-	471	-	ENSSDUP00000020215	156 (aa)	-	-
ENSSDUT00000020549	-	1164	XM_022754261	ENSSDUP00000020193	180 (aa)	XP_022609982	UPI000BBEA272

Gene Model

Click here to download ENSSDUG00000014675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014675	-	91	45.399	ENSSDUG00000013976	arl3	90	45.399
ENSSDUG00000014675	-	63	30.081	ENSSDUG00000016888	rab1ab	50	30.328
ENSSDUG00000014675	-	88	46.341	ENSSDUG00000010935	arl4d	82	46.341
ENSSDUG00000014675	-	99	42.778	ENSSDUG00000004762	-	98	42.778
ENSSDUG00000014675	-	100	79.444	ENSSDUG00000017254	-	100	79.444
ENSSDUG00000014675	-	97	45.977	ENSSDUG00000007515	ARL5B	97	45.977
ENSSDUG00000014675	-	91	41.667	ENSSDUG00000013427	-	92	41.667
ENSSDUG00000014675	-	96	82.659	ENSSDUG00000017356	-	96	82.659
ENSSDUG00000014675	-	94	59.412	ENSSDUG00000013898	arl1	96	59.412
ENSSDUG00000014675	-	98	45.198	ENSSDUG00000012261	arl5a	98	45.198
ENSSDUG00000014675	-	98	80.226	ENSSDUG00000007524	arf3b	96	80.226
ENSSDUG00000014675	-	88	45.732	ENSSDUG00000000586	arl4aa	82	45.732
ENSSDUG00000014675	-	54	54.545	ENSSDUG00000023723	-	88	54.545
ENSSDUG00000014675	-	99	91.061	ENSSDUG00000005105	arf5	99	91.061
ENSSDUG00000014675	-	98	34.392	ENSSDUG00000007121	arfrp1	93	34.392
ENSSDUG00000014675	-	89	31.429	ENSSDUG00000019629	-	87	31.429
ENSSDUG00000014675	-	95	46.893	ENSSDUG00000012868	arl4cb	92	46.893
ENSSDUG00000014675	-	92	32.530	ENSSDUG00000000578	arl8a	89	32.530
ENSSDUG00000014675	-	73	32.331	ENSSDUG00000020926	sar1b	80	34.343
ENSSDUG00000014675	-	95	41.618	ENSSDUG00000003943	arl3l2	93	41.618
ENSSDUG00000014675	-	93	45.977	ENSSDUG00000011151	-	87	45.977
ENSSDUG00000014675	-	89	30.857	ENSSDUG00000010773	sar1ab	87	30.857
ENSSDUG00000014675	-	88	45.783	ENSSDUG00000017586	-	82	45.783
ENSSDUG00000014675	-	100	40.000	ENSSDUG00000022640	arl5c	100	40.000
ENSSDUG00000014675	-	84	36.047	ENSSDUG00000006652	ARL6	91	36.047
ENSSDUG00000014675	-	98	80.226	ENSSDUG00000013041	-	98	80.226
ENSSDUG00000014675	-	91	49.091	ENSSDUG00000021397	arl2	89	49.091
ENSSDUG00000014675	-	85	42.857	ENSSDUG00000004422	arl11	91	42.857
ENSSDUG00000014675	-	92	33.735	ENSSDUG00000012529	arl8bb	89	33.735
ENSSDUG00000014675	-	100	67.222	ENSSDUG00000020599	-	100	67.222
ENSSDUG00000014675	-	92	34.337	ENSSDUG00000021055	arl8ba	75	34.337
ENSSDUG00000014675	-	98	83.616	ENSSDUG00000007780	arf2b	98	83.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014675	-	99	86.592	ENSCAFG00000001726	ARF5	99	86.592	Canis_familiaris
ENSSDUG00000014675	-	100	89.444	ENSELUG00000019582	-	100	89.444	Esox_lucius
ENSSDUG00000014675	-	84	90.132	ENSGALG00000043476	-	100	90.132	Gallus_gallus
ENSSDUG00000014675	-	91	88.415	ENSKMAG00000008864	-	95	88.415	Kryptolebias_marmoratus
ENSSDUG00000014675	-	84	78.289	ENSLACG00000012168	-	97	78.289	Latimeria_chalumnae
ENSSDUG00000014675	-	73	90.152	ENSMGAG00000008562	-	100	90.152	Meleagris_gallopavo
ENSSDUG00000014675	-	85	92.857	ENSORLG00020003354	-	91	92.857	Oryzias_latipes_hni
ENSSDUG00000014675	-	89	89.375	ENSORLG00015002471	-	77	92.857	Oryzias_latipes_hsok
ENSSDUG00000014675	-	74	78.519	ENSPMAG00000005571	-	100	78.519	Petromyzon_marinus
ENSSDUG00000014675	-	62	99.099	ENSSLDG00000005491	-	98	99.099	Seriola_lalandi_dorsalis
ENSSDUG00000014675	-	97	80.114	ENSSPUG00000004465	-	98	80.114	Sphenodon_punctatus
ENSSDUG00000014675	-	84	86.184	ENSTBEG00000007415	-	100	86.184	Tupaia_belangeri