EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000014825 (Gene tree)
Gene ID: 111227697
Gene Symbol: -
Alias: -
Full Name: non-canonical poly(A) RNA polymerase PAPD7-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10205 bases
Position: chrBDQW01000191.1:7830891-7841095
Accession: 111227697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020370	PAP_assoc	PF03828.19	7.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020734	-	3864	XM_022753340	ENSSDUP00000020370	813 (aa)	XP_022609061	-

Gene Model

Click here to download ENSSDUG00000014825's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000014825	-	67	50.887	ENSSDUG00000006848	tent4b	82	48.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014825	-	79	50.909	ENSG00000112941	TENT4A	100	77.778	Homo_sapiens
ENSSDUG00000014825	-	60	69.464	ENSAPOG00000002178	tent4a	61	69.464	Acanthochromis_polyacanthus
ENSSDUG00000014825	-	100	82.598	ENSAPOG00000018106	-	100	84.069	Acanthochromis_polyacanthus
ENSSDUG00000014825	-	69	54.188	ENSAMEG00000002806	TENT4A	99	54.188	Ailuropoda_melanoleuca
ENSSDUG00000014825	-	52	62.118	ENSACIG00000013326	tent4a	98	50.000	Amphilophus_citrinellus
ENSSDUG00000014825	-	74	71.215	ENSACIG00000014234	-	91	70.216	Amphilophus_citrinellus
ENSSDUG00000014825	-	100	83.678	ENSAOCG00000013501	-	100	84.531	Amphiprion_ocellaris
ENSSDUG00000014825	-	60	69.231	ENSAOCG00000019251	tent4a	79	55.385	Amphiprion_ocellaris
ENSSDUG00000014825	-	100	83.942	ENSAPEG00000015522	-	100	84.793	Amphiprion_percula
ENSSDUG00000014825	-	60	68.998	ENSAPEG00000002703	tent4a	83	72.346	Amphiprion_percula
ENSSDUG00000014825	-	100	86.258	ENSATEG00000024197	-	100	86.012	Anabas_testudineus
ENSSDUG00000014825	-	74	54.887	ENSATEG00000006898	tent4a	82	72.905	Anabas_testudineus
ENSSDUG00000014825	-	69	53.780	ENSACAG00000000497	TENT4A	57	79.016	Anolis_carolinensis
ENSSDUG00000014825	-	81	70.732	ENSANAG00000037806	TENT4A	87	70.732	Aotus_nancymaae
ENSSDUG00000014825	-	52	66.110	ENSACLG00000014408	tent4a	99	51.597	Astatotilapia_calliptera
ENSSDUG00000014825	-	100	75.513	ENSACLG00000016812	-	100	75.875	Astatotilapia_calliptera
ENSSDUG00000014825	-	83	53.648	ENSAMXG00000039964	TENT4A	99	48.100	Astyanax_mexicanus
ENSSDUG00000014825	-	69	77.143	ENSAMXG00000017691	tent4a	75	71.429	Astyanax_mexicanus
ENSSDUG00000014825	-	66	52.486	ENSBTAG00000003381	TENT4A	90	62.203	Bos_taurus
ENSSDUG00000014825	-	69	54.359	ENSCAFG00000010319	TENT4A	99	54.359	Canis_familiaris
ENSSDUG00000014825	-	69	54.359	ENSCAFG00020022835	TENT4A	99	54.359	Canis_lupus_dingo
ENSSDUG00000014825	-	69	54.514	ENSCHIG00000017328	TENT4A	99	55.651	Capra_hircus
ENSSDUG00000014825	-	69	52.870	ENSTSYG00000000631	TENT4A	99	54.152	Carlito_syrichta
ENSSDUG00000014825	-	69	53.033	ENSCAPG00000007792	TENT4A	99	52.787	Cavia_aperea
ENSSDUG00000014825	-	76	51.156	ENSCPOG00000009006	TENT4A	99	52.787	Cavia_porcellus
ENSSDUG00000014825	-	84	70.732	ENSCCAG00000006730	TENT4A	83	70.732	Cebus_capucinus
ENSSDUG00000014825	-	69	53.565	ENSCLAG00000003733	TENT4A	99	54.899	Chinchilla_lanigera
ENSSDUG00000014825	-	69	52.166	ENSCSAG00000017336	TENT4A	99	53.833	Chlorocebus_sabaeus
ENSSDUG00000014825	-	76	55.008	ENSCPBG00000006514	TENT4A	81	54.098	Chrysemys_picta_bellii
ENSSDUG00000014825	-	69	52.641	ENSCANG00000022871	TENT4A	99	53.833	Colobus_angolensis_palliatus
ENSSDUG00000014825	-	84	70.732	ENSCGRG00001014344	Tent4a	82	70.732	Cricetulus_griseus_chok1gshd
ENSSDUG00000014825	-	69	54.101	ENSCGRG00000006274	Tent4a	99	54.231	Cricetulus_griseus_crigri
ENSSDUG00000014825	-	61	89.655	ENSCSEG00000011470	tent4a	86	51.562	Cynoglossus_semilaevis
ENSSDUG00000014825	-	100	88.415	ENSCSEG00000003887	-	100	88.415	Cynoglossus_semilaevis
ENSSDUG00000014825	-	57	91.346	ENSCVAG00000008463	-	97	91.054	Cyprinodon_variegatus
ENSSDUG00000014825	-	84	50.000	ENSCVAG00000021741	tent4a	78	58.949	Cyprinodon_variegatus
ENSSDUG00000014825	-	63	64.491	ENSDARG00000062114	tent4a	99	56.502	Danio_rerio
ENSSDUG00000014825	-	76	53.506	ENSDNOG00000015096	TENT4A	91	53.588	Dasypus_novemcinctus
ENSSDUG00000014825	-	69	53.553	ENSDORG00000023216	Tent4a	99	53.899	Dipodomys_ordii
ENSSDUG00000014825	-	69	53.739	ENSEASG00005018583	TENT4A	99	54.844	Equus_asinus_asinus
ENSSDUG00000014825	-	69	52.807	ENSFDAG00000005946	TENT4A	99	53.767	Fukomys_damarensis
ENSSDUG00000014825	-	99	46.025	ENSFHEG00000017843	tent4a	99	46.171	Fundulus_heteroclitus
ENSSDUG00000014825	-	100	75.672	ENSFHEG00000006086	-	100	75.917	Fundulus_heteroclitus
ENSSDUG00000014825	-	80	86.667	ENSGAFG00000018741	tent4a	99	45.843	Gambusia_affinis
ENSSDUG00000014825	-	100	79.829	ENSGAFG00000000179	-	100	80.318	Gambusia_affinis
ENSSDUG00000014825	-	87	46.730	ENSGGOG00000013866	-	96	49.658	Gorilla_gorilla
ENSSDUG00000014825	-	55	64.350	ENSHBUG00000022127	tent4a	99	51.118	Haplochromis_burtoni
ENSSDUG00000014825	-	100	75.754	ENSHBUG00000001038	-	100	76.116	Haplochromis_burtoni
ENSSDUG00000014825	-	80	87.097	ENSHGLG00000005593	TENT4A	99	53.688	Heterocephalus_glaber_female
ENSSDUG00000014825	-	69	52.972	ENSHGLG00100016621	TENT4A	99	53.688	Heterocephalus_glaber_male
ENSSDUG00000014825	-	55	92.971	ENSHCOG00000000915	-	90	92.971	Hippocampus_comes
ENSSDUG00000014825	-	99	47.477	ENSHCOG00000018008	tent4a	99	47.526	Hippocampus_comes
ENSSDUG00000014825	-	50	71.535	ENSIPUG00000000878	-	59	65.227	Ictalurus_punctatus
ENSSDUG00000014825	-	65	85.294	ENSIPUG00000014941	tent4a	73	72.727	Ictalurus_punctatus
ENSSDUG00000014825	-	69	53.565	ENSSTOG00000004554	TENT4A	99	54.671	Ictidomys_tridecemlineatus
ENSSDUG00000014825	-	69	53.492	ENSJJAG00000007205	Tent4a	99	54.359	Jaculus_jaculus
ENSSDUG00000014825	-	99	76.019	ENSKMAG00000019925	-	100	76.379	Kryptolebias_marmoratus
ENSSDUG00000014825	-	74	53.374	ENSKMAG00000000725	tent4a	84	69.832	Kryptolebias_marmoratus
ENSSDUG00000014825	-	100	86.915	ENSLBEG00000021596	-	100	86.915	Labrus_bergylta
ENSSDUG00000014825	-	99	51.741	ENSLOCG00000008727	tent4a	99	52.189	Lepisosteus_oculatus
ENSSDUG00000014825	-	69	51.910	ENSLAFG00000004787	TENT4A	99	53.859	Loxodonta_africana
ENSSDUG00000014825	-	79	50.673	ENSMFAG00000038658	TENT4A	82	52.246	Macaca_fascicularis
ENSSDUG00000014825	-	83	87.097	ENSMMUG00000013189	TENT4A	99	46.612	Macaca_mulatta
ENSSDUG00000014825	-	69	52.166	ENSMLEG00000030994	TENT4A	99	53.833	Mandrillus_leucophaeus
ENSSDUG00000014825	-	100	81.995	ENSMAMG00000024030	-	100	82.117	Mastacembelus_armatus
ENSSDUG00000014825	-	56	72.439	ENSMAMG00000004931	tent4a	79	62.745	Mastacembelus_armatus
ENSSDUG00000014825	-	74	52.950	ENSMZEG00005000080	tent4a	79	55.385	Maylandia_zebra
ENSSDUG00000014825	-	100	75.151	ENSMZEG00005001805	-	100	75.513	Maylandia_zebra
ENSSDUG00000014825	-	69	55.806	ENSMGAG00000006315	TENT4A	71	80.984	Meleagris_gallopavo
ENSSDUG00000014825	-	69	53.240	ENSMAUG00000008017	Tent4a	99	54.878	Mesocricetus_auratus
ENSSDUG00000014825	-	77	70.732	ENSMICG00000016562	TENT4A	88	70.732	Microcebus_murinus
ENSSDUG00000014825	-	69	53.206	ENSMOCG00000008477	Tent4a	99	53.979	Microtus_ochrogaster
ENSSDUG00000014825	-	57	88.715	ENSMMOG00000008539	-	99	88.715	Mola_mola
ENSSDUG00000014825	-	68	56.364	ENSMMOG00000021181	tent4a	80	66.824	Mola_mola
ENSSDUG00000014825	-	80	82.353	ENSMODG00000002052	TENT4A	85	82.353	Monodelphis_domestica
ENSSDUG00000014825	-	81	84.511	ENSMALG00000018694	-	98	84.962	Monopterus_albus
ENSSDUG00000014825	-	59	68.852	ENSMALG00000002692	tent4a	61	68.852	Monopterus_albus
ENSSDUG00000014825	-	69	53.380	ENSMUSG00000034575	Tent4a	99	53.806	Mus_musculus
ENSSDUG00000014825	-	69	53.492	ENSMPUG00000007530	TENT4A	99	54.266	Mustela_putorius_furo
ENSSDUG00000014825	-	69	52.686	ENSMLUG00000004424	TENT4A	99	53.448	Myotis_lucifugus
ENSSDUG00000014825	-	69	54.003	ENSNGAG00000006352	Tent4a	99	54.514	Nannospalax_galili
ENSSDUG00000014825	-	57	87.540	ENSNBRG00000009218	TENT4A	93	87.540	Neolamprologus_brichardi
ENSSDUG00000014825	-	79	46.418	ENSNLEG00000011434	-	89	47.156	Nomascus_leucogenys
ENSSDUG00000014825	-	58	43.967	ENSMEUG00000004007	TENT4A	64	53.115	Notamacropus_eugenii
ENSSDUG00000014825	-	69	54.087	ENSODEG00000018357	TENT4A	99	54.261	Octodon_degus
ENSSDUG00000014825	-	69	56.649	ENSOANG00000011579	-	99	56.649	Ornithorhynchus_anatinus
ENSSDUG00000014825	-	69	54.561	ENSOCUG00000017025	TENT4A	99	55.497	Oryctolagus_cuniculus
ENSSDUG00000014825	-	82	51.023	ENSORLG00000025175	tent4a	74	52.315	Oryzias_latipes
ENSSDUG00000014825	-	99	69.816	ENSORLG00000027691	-	99	69.816	Oryzias_latipes
ENSSDUG00000014825	-	52	67.529	ENSORLG00020019731	tent4a	74	52.315	Oryzias_latipes_hni
ENSSDUG00000014825	-	99	70.798	ENSORLG00020022661	-	99	70.920	Oryzias_latipes_hni
ENSSDUG00000014825	-	99	68.047	ENSORLG00015006327	-	99	68.166	Oryzias_latipes_hsok
ENSSDUG00000014825	-	56	84.984	ENSOMEG00000014052	-	98	84.984	Oryzias_melastigma
ENSSDUG00000014825	-	74	55.678	ENSOMEG00000013540	tent4a	68	55.981	Oryzias_melastigma
ENSSDUG00000014825	-	69	52.166	ENSOGAG00000015032	TENT4A	99	53.820	Otolemur_garnettii
ENSSDUG00000014825	-	69	54.514	ENSOARG00000014904	TENT4A	99	55.651	Ovis_aries
ENSSDUG00000014825	-	69	52.257	ENSPPAG00000034356	TENT4A	99	54.017	Pan_paniscus
ENSSDUG00000014825	-	69	54.671	ENSPPRG00000002409	TENT4A	99	54.671	Panthera_pardus
ENSSDUG00000014825	-	79	50.909	ENSPTRG00000016717	TENT4A	80	52.985	Pan_troglodytes
ENSSDUG00000014825	-	66	77.778	ENSPKIG00000024130	tent4a	74	77.778	Paramormyrops_kingsleyae
ENSSDUG00000014825	-	99	49.527	ENSPKIG00000020499	-	75	56.625	Paramormyrops_kingsleyae
ENSSDUG00000014825	-	69	55.137	ENSPSIG00000015964	TENT4A	99	55.137	Pelodiscus_sinensis
ENSSDUG00000014825	-	52	67.933	ENSPMGG00000004132	tent4a	99	54.545	Periophthalmus_magnuspinnatus
ENSSDUG00000014825	-	71	80.678	ENSPMGG00000007999	TENT4A	100	90.000	Periophthalmus_magnuspinnatus
ENSSDUG00000014825	-	69	53.195	ENSPEMG00000024121	Tent4a	99	53.436	Peromyscus_maniculatus_bairdii
ENSSDUG00000014825	-	82	82.353	ENSPCIG00000017056	TENT4A	86	82.353	Phascolarctos_cinereus
ENSSDUG00000014825	-	84	49.934	ENSPFOG00000003961	tent4a	77	60.784	Poecilia_formosa
ENSSDUG00000014825	-	100	79.634	ENSPFOG00000016762	-	100	80.122	Poecilia_formosa
ENSSDUG00000014825	-	99	45.618	ENSPLAG00000007134	tent4a	84	53.231	Poecilia_latipinna
ENSSDUG00000014825	-	71	84.682	ENSPLAG00000004468	TENT4A	99	94.245	Poecilia_latipinna
ENSSDUG00000014825	-	100	77.669	ENSPMEG00000009954	-	100	78.160	Poecilia_mexicana
ENSSDUG00000014825	-	99	46.530	ENSPMEG00000006428	tent4a	84	53.077	Poecilia_mexicana
ENSSDUG00000014825	-	54	76.923	ENSPREG00000017547	tent4a	98	52.607	Poecilia_reticulata
ENSSDUG00000014825	-	100	69.325	ENSPREG00000011257	TENT4A	100	78.424	Poecilia_reticulata
ENSSDUG00000014825	-	69	52.522	ENSPPYG00000015334	-	99	54.359	Pongo_abelii
ENSSDUG00000014825	-	79	51.124	ENSPCOG00000016295	TENT4A	99	54.152	Propithecus_coquereli
ENSSDUG00000014825	-	69	53.217	ENSPVAG00000000511	TENT4A	99	53.596	Pteropus_vampyrus
ENSSDUG00000014825	-	52	66.110	ENSPNYG00000010769	tent4a	99	51.597	Pundamilia_nyererei
ENSSDUG00000014825	-	70	61.780	ENSPNYG00000008164	TENT4A	97	83.387	Pundamilia_nyererei
ENSSDUG00000014825	-	99	49.696	ENSPNAG00000011603	TENT4A	77	55.414	Pygocentrus_nattereri
ENSSDUG00000014825	-	79	52.793	ENSPNAG00000026563	tent4a	84	54.780	Pygocentrus_nattereri
ENSSDUG00000014825	-	69	52.768	ENSRNOG00000017613	Tent4a	99	53.195	Rattus_norvegicus
ENSSDUG00000014825	-	69	52.166	ENSRBIG00000027491	TENT4A	99	53.833	Rhinopithecus_bieti
ENSSDUG00000014825	-	69	52.166	ENSRROG00000039864	TENT4A	99	53.833	Rhinopithecus_roxellana
ENSSDUG00000014825	-	69	52.340	ENSSBOG00000035549	TENT4A	99	54.174	Saimiri_boliviensis_boliviensis
ENSSDUG00000014825	-	69	55.290	ENSSHAG00000012100	TENT4A	100	55.236	Sarcophilus_harrisii
ENSSDUG00000014825	-	56	64.935	ENSSFOG00015003516	-	98	57.218	Scleropages_formosus
ENSSDUG00000014825	-	51	71.667	ENSSFOG00015001756	tent4a	87	71.667	Scleropages_formosus
ENSSDUG00000014825	-	57	96.166	ENSSMAG00000003989	-	99	96.166	Scophthalmus_maximus
ENSSDUG00000014825	-	52	68.445	ENSSLDG00000004371	tent4a	99	53.605	Seriola_lalandi_dorsalis
ENSSDUG00000014825	-	100	99.139	ENSSLDG00000019746	-	100	99.139	Seriola_lalandi_dorsalis
ENSSDUG00000014825	-	52	68.384	ENSSPAG00000003618	tent4a	99	53.155	Stegastes_partitus
ENSSDUG00000014825	-	100	85.505	ENSSPAG00000017401	-	100	85.993	Stegastes_partitus
ENSSDUG00000014825	-	84	70.732	ENSSSCG00000017102	TENT4A	83	70.732	Sus_scrofa
ENSSDUG00000014825	-	69	56.894	ENSTGUG00000007771	TENT4A	99	55.379	Taeniopygia_guttata
ENSSDUG00000014825	-	66	65.772	ENSTRUG00000012098	tent4a	82	71.154	Takifugu_rubripes
ENSSDUG00000014825	-	92	86.800	ENSTRUG00000006698	-	98	86.400	Takifugu_rubripes
ENSSDUG00000014825	-	59	50.204	ENSTNIG00000000791	tent4a	99	51.129	Tetraodon_nigroviridis
ENSSDUG00000014825	-	69	54.407	ENSTTRG00000012547	TENT4A	99	54.407	Tursiops_truncatus
ENSSDUG00000014825	-	76	52.590	ENSUAMG00000024711	TENT4A	99	52.590	Ursus_americanus
ENSSDUG00000014825	-	69	54.188	ENSUMAG00000021088	TENT4A	99	54.188	Ursus_maritimus
ENSSDUG00000014825	-	69	54.359	ENSVVUG00000017702	TENT4A	99	54.359	Vulpes_vulpes
ENSSDUG00000014825	-	51	66.106	ENSXCOG00000002570	tent4a	75	65.783	Xiphophorus_couchianus
ENSSDUG00000014825	-	58	86.538	ENSXMAG00000026228	TENT4A	99	86.538	Xiphophorus_maculatus
ENSSDUG00000014825	-	82	83.333	ENSXMAG00000013580	tent4a	84	69.274	Xiphophorus_maculatus