EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000014891 (Gene tree)
Gene ID: 111229554
Gene Symbol: riok2
Alias: wu:fe48f07|zgc:55376|zgc:77493
Full Name: RIO kinase 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5438 bases
Position: chrBDQW01000017.1:1182399-1187836
Accession: 111229554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020500	RIO1	PF01163.22	1.3e-54	1	1
ENSSDUP00000020479	RIO1	PF01163.22	1.4e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020873	-	1554	-	ENSSDUP00000020500	517 (aa)	-	-
ENSSDUT00000020852	-	2340	XM_022755912	ENSSDUP00000020479	519 (aa)	XP_022611633	UPI000BBE2009

Gene Model

Click here to download ENSSDUG00000014891's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014891	riok2	100	63.830	ENSG00000058729	RIOK2	68	82.555	Homo_sapiens
ENSSDUG00000014891	riok2	100	86.372	ENSAPOG00000011797	riok2	100	88.676	Acanthochromis_polyacanthus
ENSSDUG00000014891	riok2	100	63.815	ENSAMEG00000014615	RIOK2	58	82.866	Ailuropoda_melanoleuca
ENSSDUG00000014891	riok2	79	85.194	ENSACIG00000020646	riok2	89	84.951	Amphilophus_citrinellus
ENSSDUG00000014891	riok2	100	89.231	ENSAOCG00000021840	riok2	100	89.808	Amphiprion_ocellaris
ENSSDUG00000014891	riok2	100	89.038	ENSAPEG00000020853	riok2	100	89.615	Amphiprion_percula
ENSSDUG00000014891	riok2	100	86.011	ENSATEG00000005671	riok2	100	85.066	Anabas_testudineus
ENSSDUG00000014891	riok2	100	65.818	ENSACAG00000011858	RIOK2	59	83.178	Anolis_carolinensis
ENSSDUG00000014891	riok2	100	64.209	ENSANAG00000015977	RIOK2	58	82.555	Aotus_nancymaae
ENSSDUG00000014891	riok2	100	85.066	ENSACLG00000002755	riok2	100	84.411	Astatotilapia_calliptera
ENSSDUG00000014891	riok2	100	76.145	ENSAMXG00000002368	riok2	100	74.472	Astyanax_mexicanus
ENSSDUG00000014891	riok2	100	64.057	ENSBTAG00000011763	RIOK2	77	83.489	Bos_taurus
ENSSDUG00000014891	riok2	63	58.642	WBGene00013688	riok-2	59	59.615	Caenorhabditis_elegans
ENSSDUG00000014891	riok2	100	63.949	ENSCJAG00000040045	RIOK2	59	81.931	Callithrix_jacchus
ENSSDUG00000014891	riok2	100	64.117	ENSCAFG00000007745	RIOK2	59	82.555	Canis_familiaris
ENSSDUG00000014891	riok2	65	68.437	ENSCAFG00020015532	-	84	73.377	Canis_lupus_dingo
ENSSDUG00000014891	riok2	100	62.842	ENSCAFG00020011453	-	68	80.374	Canis_lupus_dingo
ENSSDUG00000014891	riok2	100	66.727	ENSCHIG00000016709	RIOK2	59	83.489	Capra_hircus
ENSSDUG00000014891	riok2	100	62.811	ENSTSYG00000001916	RIOK2	58	82.243	Carlito_syrichta
ENSSDUG00000014891	riok2	96	59.491	ENSCAPG00000006762	RIOK2	54	80.970	Cavia_aperea
ENSSDUG00000014891	riok2	100	62.278	ENSCPOG00000010551	RIOK2	59	82.555	Cavia_porcellus
ENSSDUG00000014891	riok2	100	64.324	ENSCCAG00000025712	RIOK2	58	83.178	Cebus_capucinus
ENSSDUG00000014891	riok2	100	65.036	ENSCATG00000035047	RIOK2	58	82.866	Cercocebus_atys
ENSSDUG00000014891	riok2	100	64.065	ENSCLAG00000006790	RIOK2	77	81.931	Chinchilla_lanigera
ENSSDUG00000014891	riok2	65	56.955	ENSCSAG00000014233	RIOK2	59	82.805	Chlorocebus_sabaeus
ENSSDUG00000014891	riok2	100	63.685	ENSCPBG00000015732	RIOK2	77	81.931	Chrysemys_picta_bellii
ENSSDUG00000014891	riok2	99	53.155	ENSCING00000002364	-	99	52.207	Ciona_intestinalis
ENSSDUG00000014891	riok2	99	52.207	ENSCSAVG00000006970	-	62	67.208	Ciona_savignyi
ENSSDUG00000014891	riok2	100	55.776	ENSCANG00000042169	RIOK2	54	66.563	Colobus_angolensis_palliatus
ENSSDUG00000014891	riok2	100	63.750	ENSCGRG00001000871	Riok2	77	81.308	Cricetulus_griseus_chok1gshd
ENSSDUG00000014891	riok2	100	63.750	ENSCGRG00000008541	Riok2	77	81.308	Cricetulus_griseus_crigri
ENSSDUG00000014891	riok2	100	83.493	ENSCSEG00000014204	riok2	100	83.237	Cynoglossus_semilaevis
ENSSDUG00000014891	riok2	100	84.470	ENSCVAG00000012034	riok2	100	84.091	Cyprinodon_variegatus
ENSSDUG00000014891	riok2	100	74.759	ENSDARG00000035264	riok2	100	74.566	Danio_rerio
ENSSDUG00000014891	riok2	100	65.091	ENSDNOG00000037305	RIOK2	99	60.254	Dasypus_novemcinctus
ENSSDUG00000014891	riok2	100	67.286	ENSDORG00000016345	Riok2	60	82.555	Dipodomys_ordii
ENSSDUG00000014891	riok2	98	45.971	FBgn0039306	RIOK2	62	59.644	Drosophila_melanogaster
ENSSDUG00000014891	riok2	86	54.316	ENSEBUG00000006099	riok2	53	68.667	Eptatretus_burgeri
ENSSDUG00000014891	riok2	100	64.130	ENSEASG00005018799	RIOK2	58	81.308	Equus_asinus_asinus
ENSSDUG00000014891	riok2	100	63.768	ENSECAG00000018441	RIOK2	58	80.062	Equus_caballus
ENSSDUG00000014891	riok2	88	54.592	ENSEEUG00000013535	RIOK2	55	64.151	Erinaceus_europaeus
ENSSDUG00000014891	riok2	77	88.475	ENSELUG00000011239	riok2	99	84.713	Esox_lucius
ENSSDUG00000014891	riok2	100	63.406	ENSFCAG00000024077	RIOK2	58	80.685	Felis_catus
ENSSDUG00000014891	riok2	95	59.322	ENSFALG00000010277	RIOK2	55	78.157	Ficedula_albicollis
ENSSDUG00000014891	riok2	100	62.679	ENSFDAG00000015288	RIOK2	59	82.555	Fukomys_damarensis
ENSSDUG00000014891	riok2	100	86.513	ENSFHEG00000010950	riok2	100	84.778	Fundulus_heteroclitus
ENSSDUG00000014891	riok2	100	78.654	ENSGMOG00000011354	riok2	100	78.462	Gadus_morhua
ENSSDUG00000014891	riok2	100	60.714	ENSGALG00000015288	RIOK2	58	78.931	Gallus_gallus
ENSSDUG00000014891	riok2	100	85.742	ENSGAFG00000012056	riok2	100	86.513	Gambusia_affinis
ENSSDUG00000014891	riok2	100	83.238	ENSGACG00000009754	riok2	100	83.810	Gasterosteus_aculeatus
ENSSDUG00000014891	riok2	100	63.864	ENSGAGG00000013791	RIOK2	58	81.931	Gopherus_agassizii
ENSSDUG00000014891	riok2	100	64.312	ENSGGOG00000022136	RIOK2	77	82.243	Gorilla_gorilla
ENSSDUG00000014891	riok2	100	84.906	ENSHBUG00000010705	riok2	100	84.440	Haplochromis_burtoni
ENSSDUG00000014891	riok2	100	63.752	ENSHGLG00000009139	-	78	81.308	Heterocephalus_glaber_female
ENSSDUG00000014891	riok2	100	63.752	ENSHGLG00100014700	RIOK2	78	81.308	Heterocephalus_glaber_male
ENSSDUG00000014891	riok2	100	82.950	ENSHCOG00000015555	riok2	100	82.466	Hippocampus_comes
ENSSDUG00000014891	riok2	100	73.372	ENSIPUG00000007450	riok2	100	72.169	Ictalurus_punctatus
ENSSDUG00000014891	riok2	100	65.154	ENSSTOG00000006659	RIOK2	58	82.243	Ictidomys_tridecemlineatus
ENSSDUG00000014891	riok2	100	63.139	ENSJJAG00000016582	Riok2	59	81.931	Jaculus_jaculus
ENSSDUG00000014891	riok2	100	86.705	ENSKMAG00000013229	riok2	100	86.513	Kryptolebias_marmoratus
ENSSDUG00000014891	riok2	100	86.095	ENSLBEG00000015421	riok2	100	85.524	Labrus_bergylta
ENSSDUG00000014891	riok2	100	61.314	ENSLACG00000000274	RIOK2	100	61.243	Latimeria_chalumnae
ENSSDUG00000014891	riok2	100	70.398	ENSLOCG00000006432	riok2	100	70.441	Lepisosteus_oculatus
ENSSDUG00000014891	riok2	100	61.879	ENSLAFG00000000919	RIOK2	77	81.620	Loxodonta_africana
ENSSDUG00000014891	riok2	100	64.855	ENSMFAG00000033056	RIOK2	58	82.555	Macaca_fascicularis
ENSSDUG00000014891	riok2	100	65.217	ENSMMUG00000000307	RIOK2	58	82.555	Macaca_mulatta
ENSSDUG00000014891	riok2	100	62.989	ENSMNEG00000029708	RIOK2	58	82.555	Macaca_nemestrina
ENSSDUG00000014891	riok2	88	60.521	ENSMLEG00000040038	RIOK2	53	82.558	Mandrillus_leucophaeus
ENSSDUG00000014891	riok2	100	89.210	ENSMAMG00000013310	riok2	100	89.595	Mastacembelus_armatus
ENSSDUG00000014891	riok2	100	83.582	ENSMZEG00005017067	riok2	100	83.302	Maylandia_zebra
ENSSDUG00000014891	riok2	97	58.106	ENSMGAG00000006986	RIOK2	75	77.303	Meleagris_gallopavo
ENSSDUG00000014891	riok2	100	65.045	ENSMICG00000037437	RIOK2	58	81.308	Microcebus_murinus
ENSSDUG00000014891	riok2	100	65.985	ENSMOCG00000004230	Riok2	60	80.997	Microtus_ochrogaster
ENSSDUG00000014891	riok2	100	87.091	ENSMMOG00000018155	riok2	100	87.091	Mola_mola
ENSSDUG00000014891	riok2	100	62.298	ENSMODG00000015548	RIOK2	58	81.366	Monodelphis_domestica
ENSSDUG00000014891	riok2	100	86.320	ENSMALG00000011266	riok2	100	86.705	Monopterus_albus
ENSSDUG00000014891	riok2	100	65.448	ENSMUSG00000116564	Riok2	100	83.721	Mus_musculus
ENSSDUG00000014891	riok2	100	64.065	ENSMPUG00000004450	RIOK2	58	82.866	Mustela_putorius_furo
ENSSDUG00000014891	riok2	100	64.235	ENSMLUG00000016113	RIOK2	58	82.866	Myotis_lucifugus
ENSSDUG00000014891	riok2	100	63.345	ENSNGAG00000017971	Riok2	58	81.931	Nannospalax_galili
ENSSDUG00000014891	riok2	100	64.376	ENSNLEG00000014474	RIOK2	58	82.866	Nomascus_leucogenys
ENSSDUG00000014891	riok2	96	48.659	ENSMEUG00000010529	RIOK2	61	65.101	Notamacropus_eugenii
ENSSDUG00000014891	riok2	100	84.820	ENSONIG00000013689	riok2	100	84.733	Oreochromis_niloticus
ENSSDUG00000014891	riok2	97	64.193	ENSOANG00000001225	RIOK2	56	83.946	Ornithorhynchus_anatinus
ENSSDUG00000014891	riok2	100	65.523	ENSOCUG00000001656	RIOK2	58	81.620	Oryctolagus_cuniculus
ENSSDUG00000014891	riok2	100	80.962	ENSORLG00020011553	riok2	100	81.574	Oryzias_latipes_hni
ENSSDUG00000014891	riok2	100	81.888	ENSORLG00015001085	riok2	100	81.346	Oryzias_latipes_hsok
ENSSDUG00000014891	riok2	100	81.538	ENSOMEG00000004617	riok2	100	81.923	Oryzias_melastigma
ENSSDUG00000014891	riok2	100	62.182	ENSOGAG00000008467	RIOK2	58	79.751	Otolemur_garnettii
ENSSDUG00000014891	riok2	100	66.425	ENSOARG00000018138	RIOK2	58	83.489	Ovis_aries
ENSSDUG00000014891	riok2	100	59.331	ENSPPAG00000027414	RIOK2	77	74.154	Pan_paniscus
ENSSDUG00000014891	riok2	100	63.406	ENSPPRG00000000169	RIOK2	58	80.685	Panthera_pardus
ENSSDUG00000014891	riok2	100	63.406	ENSPTIG00000008344	RIOK2	58	80.997	Panthera_tigris_altaica
ENSSDUG00000014891	riok2	100	63.652	ENSPTRG00000017100	RIOK2	58	81.931	Pan_troglodytes
ENSSDUG00000014891	riok2	100	64.855	ENSPANG00000011977	RIOK2	58	82.555	Papio_anubis
ENSSDUG00000014891	riok2	100	70.718	ENSPKIG00000016220	riok2	100	71.271	Paramormyrops_kingsleyae
ENSSDUG00000014891	riok2	100	61.964	ENSPSIG00000013238	RIOK2	58	80.997	Pelodiscus_sinensis
ENSSDUG00000014891	riok2	100	81.310	ENSPMGG00000021822	riok2	100	79.576	Periophthalmus_magnuspinnatus
ENSSDUG00000014891	riok2	100	86.538	ENSPFOG00000017064	riok2	100	86.154	Poecilia_formosa
ENSSDUG00000014891	riok2	100	86.398	ENSPLAG00000003043	riok2	100	86.207	Poecilia_latipinna
ENSSDUG00000014891	riok2	100	86.398	ENSPMEG00000007622	riok2	100	86.207	Poecilia_mexicana
ENSSDUG00000014891	riok2	100	86.015	ENSPREG00000002255	riok2	100	85.441	Poecilia_reticulata
ENSSDUG00000014891	riok2	100	63.298	ENSPPYG00000015654	RIOK2	77	81.620	Pongo_abelii
ENSSDUG00000014891	riok2	100	61.717	ENSPCAG00000006508	RIOK2	77	81.620	Procavia_capensis
ENSSDUG00000014891	riok2	100	62.943	ENSPCOG00000024315	RIOK2	58	80.997	Propithecus_coquereli
ENSSDUG00000014891	riok2	81	79.179	ENSPVAG00000016658	RIOK2	73	82.243	Pteropus_vampyrus
ENSSDUG00000014891	riok2	100	85.417	ENSPNYG00000018868	riok2	100	84.762	Pundamilia_nyererei
ENSSDUG00000014891	riok2	100	74.809	ENSPNAG00000010841	riok2	100	73.423	Pygocentrus_nattereri
ENSSDUG00000014891	riok2	100	64.610	ENSRNOG00000012692	Riok2	58	81.931	Rattus_norvegicus
ENSSDUG00000014891	riok2	99	64.973	ENSRBIG00000030658	RIOK2	58	82.555	Rhinopithecus_bieti
ENSSDUG00000014891	riok2	99	64.791	ENSRROG00000039203	RIOK2	58	82.500	Rhinopithecus_roxellana
ENSSDUG00000014891	riok2	73	42.683	YNL207W	-	78	46.828	Saccharomyces_cerevisiae
ENSSDUG00000014891	riok2	100	64.130	ENSSBOG00000032152	RIOK2	58	82.555	Saimiri_boliviensis_boliviensis
ENSSDUG00000014891	riok2	100	62.610	ENSSHAG00000006935	-	76	82.243	Sarcophilus_harrisii
ENSSDUG00000014891	riok2	100	72.119	ENSSFOG00015005966	riok2	100	71.269	Scleropages_formosus
ENSSDUG00000014891	riok2	100	88.247	ENSSMAG00000010529	riok2	100	88.247	Scophthalmus_maximus
ENSSDUG00000014891	riok2	100	99.037	ENSSLDG00000001926	riok2	100	99.037	Seriola_lalandi_dorsalis
ENSSDUG00000014891	riok2	100	58.736	ENSSARG00000001798	RIOK2	60	71.963	Sorex_araneus
ENSSDUG00000014891	riok2	75	64.964	ENSSPUG00000003509	RIOK2	77	77.882	Sphenodon_punctatus
ENSSDUG00000014891	riok2	95	87.500	ENSSPAG00000016554	riok2	100	86.492	Stegastes_partitus
ENSSDUG00000014891	riok2	100	82.353	ENSTRUG00000011455	riok2	100	82.353	Takifugu_rubripes
ENSSDUG00000014891	riok2	79	80.872	ENSTNIG00000015401	riok2	100	79.126	Tetraodon_nigroviridis
ENSSDUG00000014891	riok2	100	62.929	ENSTTRG00000010640	RIOK2	58	78.816	Tursiops_truncatus
ENSSDUG00000014891	riok2	95	62.639	ENSUAMG00000008585	RIOK2	56	82.828	Ursus_americanus
ENSSDUG00000014891	riok2	100	63.345	ENSUMAG00000006726	RIOK2	58	82.555	Ursus_maritimus
ENSSDUG00000014891	riok2	88	85.204	ENSVPAG00000001542	RIOK2	88	85.204	Vicugna_pacos
ENSSDUG00000014891	riok2	100	64.247	ENSVVUG00000020170	RIOK2	58	82.243	Vulpes_vulpes
ENSSDUG00000014891	riok2	100	65.756	ENSXETG00000013194	riok2	100	64.899	Xenopus_tropicalis
ENSSDUG00000014891	riok2	100	88.054	ENSXCOG00000016879	riok2	100	87.476	Xiphophorus_couchianus
ENSSDUG00000014891	riok2	100	86.705	ENSXMAG00000007425	riok2	100	87.283	Xiphophorus_maculatus