EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000014953 (Gene tree)
Gene ID: 111234126
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8509 bases
Position: chrBDQW01000435.1:986338-994846
Accession: 111234126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020541	zf-U11-48K	PF05253.12	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000020917	-	3657	XM_022762056	ENSSDUP00000020541	331 (aa)	XP_022617777	UPI000BBE1668

Gene Model

Click here to download ENSSDUG00000014953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000014953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000014953	snrnp48	96	42.286	ENSG00000168566	SNRNP48	87	46.465	Homo_sapiens
ENSSDUG00000014953	snrnp48	95	82.866	ENSAPOG00000021430	snrnp48	95	82.866	Acanthochromis_polyacanthus
ENSSDUG00000014953	snrnp48	92	45.045	ENSAMEG00000017349	SNRNP48	80	48.561	Ailuropoda_melanoleuca
ENSSDUG00000014953	snrnp48	93	74.763	ENSACIG00000002032	snrnp48	95	74.845	Amphilophus_citrinellus
ENSSDUG00000014953	snrnp48	95	82.555	ENSAOCG00000010562	snrnp48	95	82.555	Amphiprion_ocellaris
ENSSDUG00000014953	snrnp48	95	82.759	ENSAPEG00000003231	snrnp48	95	82.759	Amphiprion_percula
ENSSDUG00000014953	snrnp48	92	81.847	ENSATEG00000020210	snrnp48	88	81.757	Anabas_testudineus
ENSSDUG00000014953	snrnp48	81	50.171	ENSACAG00000002811	SNRNP48	80	50.385	Anolis_carolinensis
ENSSDUG00000014953	snrnp48	96	42.571	ENSANAG00000033538	SNRNP48	87	46.801	Aotus_nancymaae
ENSSDUG00000014953	snrnp48	93	55.660	ENSAMXG00000015309	snrnp48	89	58.503	Astyanax_mexicanus
ENSSDUG00000014953	snrnp48	91	42.308	ENSBTAG00000001123	SNRNP48	88	45.545	Bos_taurus
ENSSDUG00000014953	snrnp48	96	42.857	ENSCJAG00000021330	SNRNP48	88	46.844	Callithrix_jacchus
ENSSDUG00000014953	snrnp48	96	42.522	ENSCAFG00000009574	SNRNP48	74	44.186	Canis_familiaris
ENSSDUG00000014953	snrnp48	95	42.730	ENSCAFG00020013203	SNRNP48	87	44.444	Canis_lupus_dingo
ENSSDUG00000014953	snrnp48	91	44.073	ENSCHIG00000015216	SNRNP48	88	46.205	Capra_hircus
ENSSDUG00000014953	snrnp48	92	41.768	ENSTSYG00000000698	SNRNP48	84	46.528	Carlito_syrichta
ENSSDUG00000014953	snrnp48	86	44.728	ENSCAPG00000006768	SNRNP48	80	50.202	Cavia_aperea
ENSSDUG00000014953	snrnp48	96	44.186	ENSCPOG00000007910	SNRNP48	88	47.176	Cavia_porcellus
ENSSDUG00000014953	snrnp48	95	42.730	ENSCCAG00000035652	SNRNP48	87	47.138	Cebus_capucinus
ENSSDUG00000014953	snrnp48	96	42.815	ENSCATG00000033947	SNRNP48	81	48.084	Cercocebus_atys
ENSSDUG00000014953	snrnp48	97	42.899	ENSCLAG00000003765	SNRNP48	88	47.541	Chinchilla_lanigera
ENSSDUG00000014953	snrnp48	95	43.353	ENSCSAG00000007409	SNRNP48	87	46.801	Chlorocebus_sabaeus
ENSSDUG00000014953	snrnp48	82	48.000	ENSCPBG00000019146	SNRNP48	77	52.227	Chrysemys_picta_bellii
ENSSDUG00000014953	snrnp48	96	42.571	ENSCANG00000030017	SNRNP48	87	46.801	Colobus_angolensis_palliatus
ENSSDUG00000014953	snrnp48	84	40.411	ENSCGRG00001008805	-	85	41.007	Cricetulus_griseus_chok1gshd
ENSSDUG00000014953	snrnp48	92	43.072	ENSCGRG00001001076	-	85	46.341	Cricetulus_griseus_chok1gshd
ENSSDUG00000014953	snrnp48	92	43.072	ENSCGRG00000007781	Snrnp48	85	46.341	Cricetulus_griseus_crigri
ENSSDUG00000014953	snrnp48	93	69.010	ENSCSEG00000000722	snrnp48	88	70.779	Cynoglossus_semilaevis
ENSSDUG00000014953	snrnp48	94	73.354	ENSCVAG00000019829	snrnp48	77	77.258	Cyprinodon_variegatus
ENSSDUG00000014953	snrnp48	93	52.923	ENSDARG00000039989	snrnp48	91	53.420	Danio_rerio
ENSSDUG00000014953	snrnp48	95	41.691	ENSDNOG00000014978	SNRNP48	87	44.631	Dasypus_novemcinctus
ENSSDUG00000014953	snrnp48	92	43.620	ENSDORG00000015140	Snrnp48	84	46.367	Dipodomys_ordii
ENSSDUG00000014953	snrnp48	96	41.228	ENSEASG00005012021	SNRNP48	98	42.687	Equus_asinus_asinus
ENSSDUG00000014953	snrnp48	83	46.875	ENSECAG00000026937	SNRNP48	88	45.364	Equus_caballus
ENSSDUG00000014953	snrnp48	92	30.303	ENSEEUG00000015437	SNRNP48	85	32.180	Erinaceus_europaeus
ENSSDUG00000014953	snrnp48	93	58.754	ENSELUG00000009766	snrnp48	80	62.021	Esox_lucius
ENSSDUG00000014953	snrnp48	82	47.535	ENSFCAG00000018853	SNRNP48	83	47.569	Felis_catus
ENSSDUG00000014953	snrnp48	69	57.143	ENSFALG00000007797	SNRNP48	85	53.532	Ficedula_albicollis
ENSSDUG00000014953	snrnp48	95	44.970	ENSFDAG00000009231	SNRNP48	87	47.475	Fukomys_damarensis
ENSSDUG00000014953	snrnp48	66	81.057	ENSFHEG00000014647	snrnp48	95	80.292	Fundulus_heteroclitus
ENSSDUG00000014953	snrnp48	90	61.250	ENSGMOG00000018599	-	95	63.787	Gadus_morhua
ENSSDUG00000014953	snrnp48	76	54.074	ENSGALG00000013005	SNRNP48	90	53.532	Gallus_gallus
ENSSDUG00000014953	snrnp48	95	74.006	ENSGAFG00000021639	snrnp48	95	74.006	Gambusia_affinis
ENSSDUG00000014953	snrnp48	73	81.124	ENSGACG00000017756	-	97	74.618	Gasterosteus_aculeatus
ENSSDUG00000014953	snrnp48	83	47.351	ENSGAGG00000000865	SNRNP48	81	51.406	Gopherus_agassizii
ENSSDUG00000014953	snrnp48	95	42.775	ENSGGOG00000013220	SNRNP48	87	46.801	Gorilla_gorilla
ENSSDUG00000014953	snrnp48	93	78.797	ENSHBUG00000017066	snrnp48	94	78.505	Haplochromis_burtoni
ENSSDUG00000014953	snrnp48	95	42.433	ENSHGLG00000015241	SNRNP48	87	46.128	Heterocephalus_glaber_female
ENSSDUG00000014953	snrnp48	95	42.433	ENSHGLG00100010027	SNRNP48	87	46.128	Heterocephalus_glaber_male
ENSSDUG00000014953	snrnp48	81	68.571	ENSHCOG00000014066	snrnp48	94	67.178	Hippocampus_comes
ENSSDUG00000014953	snrnp48	92	43.027	ENSSTOG00000014635	SNRNP48	84	46.528	Ictidomys_tridecemlineatus
ENSSDUG00000014953	snrnp48	82	47.703	ENSJJAG00000011495	Snrnp48	87	45.791	Jaculus_jaculus
ENSSDUG00000014953	snrnp48	95	73.065	ENSKMAG00000016514	snrnp48	95	75.232	Kryptolebias_marmoratus
ENSSDUG00000014953	snrnp48	95	81.931	ENSLBEG00000026249	snrnp48	95	82.188	Labrus_bergylta
ENSSDUG00000014953	snrnp48	91	50.949	ENSLACG00000003958	SNRNP48	87	50.842	Latimeria_chalumnae
ENSSDUG00000014953	snrnp48	82	62.143	ENSLOCG00000004187	snrnp48	94	58.491	Lepisosteus_oculatus
ENSSDUG00000014953	snrnp48	82	47.535	ENSLAFG00000011152	SNRNP48	81	48.592	Loxodonta_africana
ENSSDUG00000014953	snrnp48	96	42.571	ENSMFAG00000045216	SNRNP48	87	46.801	Macaca_fascicularis
ENSSDUG00000014953	snrnp48	96	42.571	ENSMMUG00000014785	SNRNP48	87	46.801	Macaca_mulatta
ENSSDUG00000014953	snrnp48	96	42.571	ENSMNEG00000042269	SNRNP48	87	46.801	Macaca_nemestrina
ENSSDUG00000014953	snrnp48	96	42.571	ENSMLEG00000034004	SNRNP48	87	46.801	Mandrillus_leucophaeus
ENSSDUG00000014953	snrnp48	95	76.875	ENSMAMG00000018673	snrnp48	83	77.116	Mastacembelus_armatus
ENSSDUG00000014953	snrnp48	82	51.325	ENSMGAG00000006037	SNRNP48	91	52.574	Meleagris_gallopavo
ENSSDUG00000014953	snrnp48	96	42.197	ENSMAUG00000011944	Snrnp48	89	44.518	Mesocricetus_auratus
ENSSDUG00000014953	snrnp48	92	42.553	ENSMICG00000012497	SNRNP48	84	46.713	Microcebus_murinus
ENSSDUG00000014953	snrnp48	96	44.868	ENSMOCG00000015555	Snrnp48	89	46.512	Microtus_ochrogaster
ENSSDUG00000014953	snrnp48	57	84.536	ENSMMOG00000003072	-	61	85.417	Mola_mola
ENSSDUG00000014953	snrnp48	83	45.946	ENSMODG00000009996	SNRNP48	84	45.079	Monodelphis_domestica
ENSSDUG00000014953	snrnp48	95	82.188	ENSMALG00000005725	snrnp48	95	82.445	Monopterus_albus
ENSSDUG00000014953	snrnp48	92	43.731	MGP_CAROLIEiJ_G0018441	Snrnp48	85	46.528	Mus_caroli
ENSSDUG00000014953	snrnp48	92	43.425	ENSMUSG00000021431	Snrnp48	85	45.833	Mus_musculus
ENSSDUG00000014953	snrnp48	92	44.277	MGP_PahariEiJ_G0019509	Snrnp48	85	47.782	Mus_pahari
ENSSDUG00000014953	snrnp48	92	43.731	MGP_SPRETEiJ_G0019321	Snrnp48	85	46.181	Mus_spretus
ENSSDUG00000014953	snrnp48	96	43.402	ENSNGAG00000004849	Snrnp48	88	46.179	Nannospalax_galili
ENSSDUG00000014953	snrnp48	93	78.797	ENSNBRG00000012127	snrnp48	94	78.505	Neolamprologus_brichardi
ENSSDUG00000014953	snrnp48	96	42.571	ENSNLEG00000011667	SNRNP48	87	46.801	Nomascus_leucogenys
ENSSDUG00000014953	snrnp48	88	45.098	ENSOPRG00000015471	SNRNP48	88	46.207	Ochotona_princeps
ENSSDUG00000014953	snrnp48	93	78.864	ENSONIG00000001520	snrnp48	94	78.882	Oreochromis_niloticus
ENSSDUG00000014953	snrnp48	52	36.816	ENSOANG00000019888	-	99	37.198	Ornithorhynchus_anatinus
ENSSDUG00000014953	snrnp48	78	47.426	ENSOCUG00000005168	SNRNP48	94	47.059	Oryctolagus_cuniculus
ENSSDUG00000014953	snrnp48	88	76.531	ENSORLG00000015654	snrnp48	94	75.549	Oryzias_latipes
ENSSDUG00000014953	snrnp48	88	76.190	ENSORLG00020015976	snrnp48	80	75.235	Oryzias_latipes_hni
ENSSDUG00000014953	snrnp48	88	76.871	ENSORLG00015022379	snrnp48	80	75.862	Oryzias_latipes_hsok
ENSSDUG00000014953	snrnp48	93	78.594	ENSOMEG00000022007	snrnp48	94	77.987	Oryzias_melastigma
ENSSDUG00000014953	snrnp48	82	46.367	ENSOGAG00000005275	SNRNP48	90	44.816	Otolemur_garnettii
ENSSDUG00000014953	snrnp48	82	45.675	ENSOARG00000017319	SNRNP48	85	49.194	Ovis_aries
ENSSDUG00000014953	snrnp48	96	42.571	ENSPPAG00000032873	SNRNP48	87	46.801	Pan_paniscus
ENSSDUG00000014953	snrnp48	79	48.364	ENSPPRG00000004283	SNRNP48	79	48.727	Panthera_pardus
ENSSDUG00000014953	snrnp48	69	50.840	ENSPTIG00000013502	SNRNP48	79	50.840	Panthera_tigris_altaica
ENSSDUG00000014953	snrnp48	96	42.571	ENSPTRG00000017703	SNRNP48	87	46.801	Pan_troglodytes
ENSSDUG00000014953	snrnp48	96	42.571	ENSPANG00000000771	SNRNP48	87	46.801	Papio_anubis
ENSSDUG00000014953	snrnp48	91	56.287	ENSPKIG00000013703	snrnp48	61	60.554	Paramormyrops_kingsleyae
ENSSDUG00000014953	snrnp48	77	48.387	ENSPSIG00000002213	SNRNP48	76	51.852	Pelodiscus_sinensis
ENSSDUG00000014953	snrnp48	77	65.169	ENSPMGG00000008120	snrnp48	95	65.169	Periophthalmus_magnuspinnatus
ENSSDUG00000014953	snrnp48	92	43.675	ENSPEMG00000008872	Snrnp48	85	46.690	Peromyscus_maniculatus_bairdii
ENSSDUG00000014953	snrnp48	95	74.312	ENSPFOG00000003578	snrnp48	95	74.312	Poecilia_formosa
ENSSDUG00000014953	snrnp48	69	76.793	ENSPLAG00000002290	snrnp48	82	76.793	Poecilia_latipinna
ENSSDUG00000014953	snrnp48	95	74.924	ENSPMEG00000018033	snrnp48	95	74.924	Poecilia_mexicana
ENSSDUG00000014953	snrnp48	95	74.006	ENSPREG00000018541	snrnp48	95	74.006	Poecilia_reticulata
ENSSDUG00000014953	snrnp48	96	42.286	ENSPPYG00000016209	SNRNP48	87	46.465	Pongo_abelii
ENSSDUG00000014953	snrnp48	71	37.450	ENSPCAG00000011991	SNRNP48	96	38.550	Procavia_capensis
ENSSDUG00000014953	snrnp48	82	47.552	ENSPVAG00000002854	SNRNP48	87	46.622	Pteropus_vampyrus
ENSSDUG00000014953	snrnp48	92	79.421	ENSPNYG00000015399	snrnp48	95	80.135	Pundamilia_nyererei
ENSSDUG00000014953	snrnp48	92	43.750	ENSRNOG00000013756	Snrnp48	85	47.440	Rattus_norvegicus
ENSSDUG00000014953	snrnp48	82	47.735	ENSRBIG00000043856	SNRNP48	94	46.801	Rhinopithecus_bieti
ENSSDUG00000014953	snrnp48	96	42.571	ENSRROG00000043229	SNRNP48	87	46.801	Rhinopithecus_roxellana
ENSSDUG00000014953	snrnp48	96	42.857	ENSSBOG00000019486	SNRNP48	87	47.138	Saimiri_boliviensis_boliviensis
ENSSDUG00000014953	snrnp48	84	46.512	ENSSHAG00000014483	SNRNP48	89	45.625	Sarcophilus_harrisii
ENSSDUG00000014953	snrnp48	73	59.127	ENSSFOG00015006610	snrnp48	73	57.980	Scleropages_formosus
ENSSDUG00000014953	snrnp48	100	96.997	ENSSLDG00000005989	snrnp48	100	96.997	Seriola_lalandi_dorsalis
ENSSDUG00000014953	snrnp48	78	48.387	ENSSPUG00000006257	SNRNP48	71	50.198	Sphenodon_punctatus
ENSSDUG00000014953	snrnp48	95	80.745	ENSSPAG00000006454	snrnp48	95	80.997	Stegastes_partitus
ENSSDUG00000014953	snrnp48	77	51.418	ENSTGUG00000007575	SNRNP48	79	53.386	Taeniopygia_guttata
ENSSDUG00000014953	snrnp48	95	66.355	ENSTRUG00000007031	snrnp48	88	71.761	Takifugu_rubripes
ENSSDUG00000014953	snrnp48	99	65.875	ENSTNIG00000012977	-	86	67.785	Tetraodon_nigroviridis
ENSSDUG00000014953	snrnp48	73	48.819	ENSTBEG00000015620	SNRNP48	75	48.819	Tupaia_belangeri
ENSSDUG00000014953	snrnp48	91	43.491	ENSTTRG00000016715	SNRNP48	87	46.465	Tursiops_truncatus
ENSSDUG00000014953	snrnp48	95	43.452	ENSUAMG00000003690	SNRNP48	87	45.946	Ursus_americanus
ENSSDUG00000014953	snrnp48	67	49.569	ENSVPAG00000003557	SNRNP48	85	48.583	Vicugna_pacos
ENSSDUG00000014953	snrnp48	92	43.161	ENSVVUG00000004996	SNRNP48	84	44.983	Vulpes_vulpes
ENSSDUG00000014953	snrnp48	91	49.032	ENSXETG00000020447	snrnp48	95	47.500	Xenopus_tropicalis
ENSSDUG00000014953	snrnp48	95	65.231	ENSXCOG00000004478	snrnp48	95	68.615	Xiphophorus_couchianus
ENSSDUG00000014953	snrnp48	95	74.006	ENSXMAG00000013595	snrnp48	95	74.006	Xiphophorus_maculatus