EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000015116 (Gene tree)
Gene ID: 111236176
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111236176
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3120 bases
Position: chrBDQW01000590.1:303180-306299
Accession: 111236176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020751	PABP	PF00658.18	1.7e-43	1	3
ENSSDUP00000020751	PABP	PF00658.18	1.7e-43	2	3
ENSSDUP00000020751	PABP	PF00658.18	1.7e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000021128	-	1720	XM_022764831	ENSSDUP00000020751	215 (aa)	XP_022620552	UPI000BBE364E

Gene Model

Click here to download ENSSDUG00000015116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015116	-	100	85.981	ENSAPOG00000023881	-	100	85.981	Acanthochromis_polyacanthus
ENSSDUG00000015116	-	100	85.047	ENSAOCG00000019884	-	100	85.047	Amphiprion_ocellaris
ENSSDUG00000015116	-	100	85.047	ENSAPEG00000020987	-	100	85.047	Amphiprion_percula
ENSSDUG00000015116	-	98	87.850	ENSATEG00000013831	-	99	87.850	Anabas_testudineus
ENSSDUG00000015116	-	100	84.722	ENSACLG00000027916	-	100	84.722	Astatotilapia_calliptera
ENSSDUG00000015116	-	99	58.716	ENSAMXG00000041484	-	95	59.259	Astyanax_mexicanus
ENSSDUG00000015116	-	98	79.444	ENSCSEG00000001317	-	100	77.419	Cynoglossus_semilaevis
ENSSDUG00000015116	-	100	78.972	ENSCVAG00000000578	-	99	78.972	Cyprinodon_variegatus
ENSSDUG00000015116	-	99	69.953	ENSELUG00000001731	-	80	69.953	Esox_lucius
ENSSDUG00000015116	-	98	78.302	ENSFHEG00000007741	-	98	78.302	Fundulus_heteroclitus
ENSSDUG00000015116	-	85	73.626	ENSGAFG00000012983	-	67	73.626	Gambusia_affinis
ENSSDUG00000015116	-	100	81.905	ENSHBUG00000000185	-	59	81.905	Haplochromis_burtoni
ENSSDUG00000015116	-	99	71.296	ENSHCOG00000003117	-	100	71.296	Hippocampus_comes
ENSSDUG00000015116	-	98	82.547	ENSKMAG00000011397	-	99	82.547	Kryptolebias_marmoratus
ENSSDUG00000015116	-	100	86.916	ENSLBEG00000027847	-	96	86.916	Labrus_bergylta
ENSSDUG00000015116	-	94	60.150	ENSLOCG00000003085	-	89	59.155	Lepisosteus_oculatus
ENSSDUG00000015116	-	100	90.654	ENSMAMG00000017628	-	100	90.654	Mastacembelus_armatus
ENSSDUG00000015116	-	96	74.176	ENSMMOG00000004490	-	93	74.176	Mola_mola
ENSSDUG00000015116	-	98	88.208	ENSMALG00000004586	-	99	88.208	Monopterus_albus
ENSSDUG00000015116	-	97	83.240	ENSNBRG00000006752	-	76	83.240	Neolamprologus_brichardi
ENSSDUG00000015116	-	94	61.000	ENSPKIG00000005307	-	93	61.792	Paramormyrops_kingsleyae
ENSSDUG00000015116	-	96	66.667	ENSPMGG00000004590	-	100	65.000	Periophthalmus_magnuspinnatus
ENSSDUG00000015116	-	100	81.132	ENSPFOG00000023453	-	100	81.132	Poecilia_formosa
ENSSDUG00000015116	-	99	81.308	ENSPLAG00000003198	-	100	80.556	Poecilia_latipinna
ENSSDUG00000015116	-	97	76.404	ENSPMEG00000022008	-	63	76.404	Poecilia_mexicana
ENSSDUG00000015116	-	100	74.419	ENSPREG00000001981	-	100	72.558	Poecilia_reticulata
ENSSDUG00000015116	-	97	81.657	ENSPNYG00000004740	-	87	81.657	Pundamilia_nyererei
ENSSDUG00000015116	-	85	46.907	ENSPNAG00000018692	-	73	46.907	Pygocentrus_nattereri
ENSSDUG00000015116	-	100	65.094	ENSSFOG00015001322	-	95	65.094	Scleropages_formosus
ENSSDUG00000015116	-	99	83.568	ENSSMAG00000008778	-	99	83.568	Scophthalmus_maximus
ENSSDUG00000015116	-	100	98.140	ENSSLDG00000000425	-	100	98.140	Seriola_lalandi_dorsalis
ENSSDUG00000015116	-	100	87.383	ENSSPAG00000015141	-	100	87.383	Stegastes_partitus
ENSSDUG00000015116	-	99	76.389	ENSTRUG00000021899	-	99	76.389	Takifugu_rubripes
ENSSDUG00000015116	-	99	71.495	ENSTNIG00000002576	-	99	71.495	Tetraodon_nigroviridis
ENSSDUG00000015116	-	100	65.581	ENSXCOG00000001548	-	98	65.116	Xiphophorus_couchianus
ENSSDUG00000015116	-	100	80.093	ENSXMAG00000021863	-	100	80.093	Xiphophorus_maculatus