EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000015182 (Gene tree)
Gene ID: 111231650
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF57.1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 18188 bases
Position: chrBDQW01000312.1:863339-881526
Accession: 111231650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	1	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	2	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	3	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	4	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	5	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	6	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	7	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	8	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	9	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	10	11
ENSSDUP00000020860	zf-C2H2	PF00096.26	3.2e-61	11	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	1	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	2	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	3	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	4	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	5	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	6	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	7	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	8	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	9	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	10	11
ENSSDUP00000020857	zf-C2H2	PF00096.26	3.2e-61	11	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	1	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	2	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	3	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	4	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	5	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	6	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	7	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	8	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	9	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	10	11
ENSSDUP00000020868	zf-C2H2	PF00096.26	3.2e-61	11	11
ENSSDUP00000020860	zf-met	PF12874.7	1.1e-26	1	4
ENSSDUP00000020860	zf-met	PF12874.7	1.1e-26	2	4
ENSSDUP00000020860	zf-met	PF12874.7	1.1e-26	3	4
ENSSDUP00000020860	zf-met	PF12874.7	1.1e-26	4	4
ENSSDUP00000020857	zf-met	PF12874.7	1.1e-26	1	4
ENSSDUP00000020857	zf-met	PF12874.7	1.1e-26	2	4
ENSSDUP00000020857	zf-met	PF12874.7	1.1e-26	3	4
ENSSDUP00000020857	zf-met	PF12874.7	1.1e-26	4	4
ENSSDUP00000020868	zf-met	PF12874.7	1.1e-26	1	4
ENSSDUP00000020868	zf-met	PF12874.7	1.1e-26	2	4
ENSSDUP00000020868	zf-met	PF12874.7	1.1e-26	3	4
ENSSDUP00000020868	zf-met	PF12874.7	1.1e-26	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000021237	-	2886	-	ENSSDUP00000020860	524 (aa)	-	-
ENSSDUT00000021235	-	3109	-	ENSSDUP00000020857	524 (aa)	-	UPI000BBECB78
ENSSDUT00000021245	-	2871	XM_022758848	ENSSDUP00000020868	524 (aa)	XP_022614569	UPI000BBECB78

Gene Model

Click here to download ENSSDUG00000015182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000015182	-	100	58.966	ENSSDUG00000009577	-	100	58.966
ENSSDUG00000015182	-	84	59.727	ENSSDUG00000015191	-	99	59.727
ENSSDUG00000015182	-	60	53.333	ENSSDUG00000023765	-	67	53.333
ENSSDUG00000015182	-	70	48.413	ENSSDUG00000023764	-	95	48.413
ENSSDUG00000015182	-	100	51.741	ENSSDUG00000019911	-	99	50.000
ENSSDUG00000015182	-	84	50.199	ENSSDUG00000004835	-	91	50.199
ENSSDUG00000015182	-	66	45.455	ENSSDUG00000001637	scrt2	51	45.455
ENSSDUG00000015182	-	65	48.466	ENSSDUG00000013904	-	62	48.466
ENSSDUG00000015182	-	69	49.338	ENSSDUG00000015013	-	59	49.338
ENSSDUG00000015182	-	82	42.062	ENSSDUG00000020810	-	95	41.856
ENSSDUG00000015182	-	67	44.393	ENSSDUG00000022412	znf648	62	44.737
ENSSDUG00000015182	-	67	44.048	ENSSDUG00000022410	gfi1ab	50	44.048
ENSSDUG00000015182	-	69	47.783	ENSSDUG00000004089	-	95	47.541
ENSSDUG00000015182	-	99	39.812	ENSSDUG00000000799	-	92	39.812
ENSSDUG00000015182	-	71	37.778	ENSSDUG00000002675	znf646	86	37.778
ENSSDUG00000015182	-	68	42.708	ENSSDUG00000016450	-	66	40.789
ENSSDUG00000015182	-	99	53.906	ENSSDUG00000000838	-	93	53.906
ENSSDUG00000015182	-	83	55.469	ENSSDUG00000006426	-	99	55.469
ENSSDUG00000015182	-	65	36.552	ENSSDUG00000017250	-	69	36.552
ENSSDUG00000015182	-	85	57.878	ENSSDUG00000009601	-	99	57.878
ENSSDUG00000015182	-	65	48.810	ENSSDUG00000022914	-	50	48.810
ENSSDUG00000015182	-	70	56.154	ENSSDUG00000005323	-	99	56.154
ENSSDUG00000015182	-	100	50.495	ENSSDUG00000000786	-	99	50.360
ENSSDUG00000015182	-	76	46.377	ENSSDUG00000002174	-	77	46.377
ENSSDUG00000015182	-	75	32.176	ENSSDUG00000010305	-	64	33.645
ENSSDUG00000015182	-	99	50.769	ENSSDUG00000022035	-	99	50.769
ENSSDUG00000015182	-	66	48.945	ENSSDUG00000020595	-	88	46.094
ENSSDUG00000015182	-	67	33.046	ENSSDUG00000014574	znf526	63	33.425
ENSSDUG00000015182	-	76	50.510	ENSSDUG00000022170	zbtb49	51	50.510
ENSSDUG00000015182	-	60	44.954	ENSSDUG00000019933	snai1a	71	44.954
ENSSDUG00000015182	-	69	39.886	ENSSDUG00000019932	ZNF319	86	39.886
ENSSDUG00000015182	-	83	38.053	ENSSDUG00000013335	-	93	38.053
ENSSDUG00000015182	-	100	38.328	ENSSDUG00000006740	-	100	37.262
ENSSDUG00000015182	-	71	61.972	ENSSDUG00000015204	-	99	61.972
ENSSDUG00000015182	-	84	49.776	ENSSDUG00000020788	-	93	49.776
ENSSDUG00000015182	-	100	44.495	ENSSDUG00000020783	-	99	44.495
ENSSDUG00000015182	-	71	51.852	ENSSDUG00000006808	-	79	51.852
ENSSDUG00000015182	-	67	50.588	ENSSDUG00000002195	-	99	50.588
ENSSDUG00000015182	-	70	44.961	ENSSDUG00000016734	-	76	44.961
ENSSDUG00000015182	-	83	58.750	ENSSDUG00000008682	-	99	58.750
ENSSDUG00000015182	-	100	63.587	ENSSDUG00000009425	-	99	61.867
ENSSDUG00000015182	-	87	56.267	ENSSDUG00000007336	-	100	56.267
ENSSDUG00000015182	-	80	48.485	ENSSDUG00000000496	-	51	48.485
ENSSDUG00000015182	-	89	56.723	ENSSDUG00000009563	-	99	56.723
ENSSDUG00000015182	-	69	41.667	ENSSDUG00000002488	-	64	41.667
ENSSDUG00000015182	-	79	53.433	ENSSDUG00000015254	-	90	58.647
ENSSDUG00000015182	-	77	34.444	ENSSDUG00000021415	si:ch211-216l23.1	91	34.444
ENSSDUG00000015182	-	69	47.887	ENSSDUG00000020805	-	88	47.887
ENSSDUG00000015182	-	68	38.028	ENSSDUG00000003003	znf319b	92	38.028
ENSSDUG00000015182	-	80	60.000	ENSSDUG00000009421	-	100	60.000
ENSSDUG00000015182	-	87	45.536	ENSSDUG00000011170	znf236	70	44.762
ENSSDUG00000015182	-	83	56.341	ENSSDUG00000008943	-	99	56.031
ENSSDUG00000015182	-	68	43.704	ENSSDUG00000018060	snai2	65	43.704
ENSSDUG00000015182	-	92	59.945	ENSSDUG00000009534	-	92	56.125
ENSSDUG00000015182	-	74	45.172	ENSSDUG00000006463	-	88	43.711
ENSSDUG00000015182	-	83	59.302	ENSSDUG00000009439	-	99	57.826
ENSSDUG00000015182	-	68	49.432	ENSSDUG00000011244	-	73	49.432
ENSSDUG00000015182	-	100	55.357	ENSSDUG00000009553	-	99	55.357
ENSSDUG00000015182	-	66	38.462	ENSSDUG00000001918	znf366	60	38.462
ENSSDUG00000015182	-	99	42.000	ENSSDUG00000000705	-	90	42.000
ENSSDUG00000015182	-	73	40.132	ENSSDUG00000000889	-	71	40.132
ENSSDUG00000015182	-	65	44.379	ENSSDUG00000011604	gfi1b	52	44.379
ENSSDUG00000015182	-	79	40.896	ENSSDUG00000004892	-	95	36.975
ENSSDUG00000015182	-	92	50.000	ENSSDUG00000020774	-	92	50.495
ENSSDUG00000015182	-	89	59.649	ENSSDUG00000004867	-	96	65.854
ENSSDUG00000015182	-	84	50.775	ENSSDUG00000000946	-	99	50.775
ENSSDUG00000015182	-	70	54.749	ENSSDUG00000001263	-	98	54.749
ENSSDUG00000015182	-	70	36.503	ENSSDUG00000009223	zbtb41	56	36.503
ENSSDUG00000015182	-	68	43.590	ENSSDUG00000020397	prdm5	84	43.590
ENSSDUG00000015182	-	99	41.772	ENSSDUG00000000905	-	92	41.176
ENSSDUG00000015182	-	66	58.101	ENSSDUG00000004650	-	98	58.101
ENSSDUG00000015182	-	89	56.721	ENSSDUG00000005401	-	99	58.057
ENSSDUG00000015182	-	87	51.724	ENSSDUG00000022162	-	86	51.724
ENSSDUG00000015182	-	79	54.481	ENSSDUG00000015159	-	89	55.206
ENSSDUG00000015182	-	79	37.226	ENSSDUG00000007752	scrt1b	80	37.226
ENSSDUG00000015182	-	86	43.165	ENSSDUG00000012926	-	100	43.165
ENSSDUG00000015182	-	99	40.506	ENSSDUG00000008329	-	88	53.409
ENSSDUG00000015182	-	97	40.836	ENSSDUG00000000695	-	91	41.842
ENSSDUG00000015182	-	84	53.179	ENSSDUG00000015622	-	99	53.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015182	-	97	58.039	ENSAPOG00000006303	-	93	61.751	Acanthochromis_polyacanthus
ENSSDUG00000015182	-	80	54.406	ENSAPOG00000008802	-	100	59.259	Acanthochromis_polyacanthus
ENSSDUG00000015182	-	72	41.456	ENSAPOG00000019960	-	95	43.767	Acanthochromis_polyacanthus
ENSSDUG00000015182	-	87	54.286	ENSACIG00000004745	-	96	52.703	Amphilophus_citrinellus
ENSSDUG00000015182	-	75	57.803	ENSACIG00000022658	-	92	60.079	Amphilophus_citrinellus
ENSSDUG00000015182	-	84	58.786	ENSAOCG00000013130	-	96	58.786	Amphiprion_ocellaris
ENSSDUG00000015182	-	76	57.941	ENSAOCG00000013710	-	99	57.941	Amphiprion_ocellaris
ENSSDUG00000015182	-	85	55.160	ENSAOCG00000014165	-	95	54.730	Amphiprion_ocellaris
ENSSDUG00000015182	-	90	58.786	ENSAPEG00000009383	-	98	58.786	Amphiprion_percula
ENSSDUG00000015182	-	84	59.032	ENSAPEG00000006650	-	98	59.661	Amphiprion_percula
ENSSDUG00000015182	-	73	52.381	ENSATEG00000015695	-	89	52.381	Anabas_testudineus
ENSSDUG00000015182	-	73	52.137	ENSATEG00000017618	-	97	52.137	Anabas_testudineus
ENSSDUG00000015182	-	87	52.589	ENSACLG00000018746	-	95	53.239	Astatotilapia_calliptera
ENSSDUG00000015182	-	89	53.535	ENSACLG00000026703	-	90	53.535	Astatotilapia_calliptera
ENSSDUG00000015182	-	92	55.460	ENSACLG00000021343	-	98	55.460	Astatotilapia_calliptera
ENSSDUG00000015182	-	89	60.000	ENSACLG00000023513	-	97	59.375	Astatotilapia_calliptera
ENSSDUG00000015182	-	71	43.182	ENSACLG00000019291	-	95	43.182	Astatotilapia_calliptera
ENSSDUG00000015182	-	66	49.799	ENSAMXG00000039408	-	91	49.799	Astyanax_mexicanus
ENSSDUG00000015182	-	69	56.502	ENSAMXG00000035920	-	90	56.502	Astyanax_mexicanus
ENSSDUG00000015182	-	72	57.000	ENSAMXG00000041975	-	85	57.000	Astyanax_mexicanus
ENSSDUG00000015182	-	69	50.472	ENSAMXG00000043302	-	73	50.472	Astyanax_mexicanus
ENSSDUG00000015182	-	70	49.157	ENSAMXG00000042275	-	96	49.157	Astyanax_mexicanus
ENSSDUG00000015182	-	77	50.777	ENSBTAG00000016191	ZNF32	89	50.777	Bos_taurus
ENSSDUG00000015182	-	77	50.777	ENSCHIG00000021099	ZNF32	89	50.777	Capra_hircus
ENSSDUG00000015182	-	69	50.746	ENSCSAVG00000001808	-	100	50.746	Ciona_savignyi
ENSSDUG00000015182	-	83	50.617	ENSCVAG00000021225	-	93	63.158	Cyprinodon_variegatus
ENSSDUG00000015182	-	79	50.519	ENSDARG00000099986	si:ch211-207i20.2	82	50.519	Danio_rerio
ENSSDUG00000015182	-	77	51.295	ENSDNOG00000035046	ZNF32	89	51.295	Dasypus_novemcinctus
ENSSDUG00000015182	-	77	51.295	ENSEASG00005006910	ZNF32	89	51.295	Equus_asinus_asinus
ENSSDUG00000015182	-	77	51.295	ENSECAG00000023676	ZNF32	89	51.295	Equus_caballus
ENSSDUG00000015182	-	69	45.183	ENSELUG00000021229	-	83	46.386	Esox_lucius
ENSSDUG00000015182	-	71	51.839	ENSFHEG00000018063	-	90	50.149	Fundulus_heteroclitus
ENSSDUG00000015182	-	76	50.649	ENSFHEG00000000678	-	94	50.649	Fundulus_heteroclitus
ENSSDUG00000015182	-	91	46.905	ENSGAFG00000020499	-	92	47.727	Gambusia_affinis
ENSSDUG00000015182	-	69	46.026	ENSGACG00000010352	si:ch211-207i20.2	61	46.026	Gasterosteus_aculeatus
ENSSDUG00000015182	-	67	60.338	ENSHBUG00000021003	-	96	60.338	Haplochromis_burtoni
ENSSDUG00000015182	-	79	51.562	ENSHBUG00000015166	-	96	53.617	Haplochromis_burtoni
ENSSDUG00000015182	-	72	41.047	ENSHBUG00000013296	-	98	41.047	Haplochromis_burtoni
ENSSDUG00000015182	-	69	53.509	ENSIPUG00000021998	-	98	53.509	Ictalurus_punctatus
ENSSDUG00000015182	-	69	52.201	ENSIPUG00000022741	-	79	52.201	Ictalurus_punctatus
ENSSDUG00000015182	-	65	52.209	ENSIPUG00000005733	-	74	52.209	Ictalurus_punctatus
ENSSDUG00000015182	-	68	50.455	ENSIPUG00000023761	-	63	50.455	Ictalurus_punctatus
ENSSDUG00000015182	-	69	51.208	ENSIPUG00000002655	-	98	51.208	Ictalurus_punctatus
ENSSDUG00000015182	-	73	48.352	ENSLBEG00000020128	-	95	50.532	Labrus_bergylta
ENSSDUG00000015182	-	100	74.566	ENSMAMG00000014734	-	94	74.566	Mastacembelus_armatus
ENSSDUG00000015182	-	87	54.462	ENSMZEG00005007262	-	97	54.462	Maylandia_zebra
ENSSDUG00000015182	-	87	52.589	ENSMZEG00005003336	-	96	49.510	Maylandia_zebra
ENSSDUG00000015182	-	65	41.389	ENSMZEG00005020156	-	85	41.389	Maylandia_zebra
ENSSDUG00000015182	-	69	42.857	ENSMZEG00005012715	-	82	42.857	Maylandia_zebra
ENSSDUG00000015182	-	83	50.829	ENSMZEG00005025343	-	99	50.829	Maylandia_zebra
ENSSDUG00000015182	-	68	44.231	ENSMZEG00005020162	-	73	44.231	Maylandia_zebra
ENSSDUG00000015182	-	69	41.975	ENSMZEG00005014592	-	95	41.975	Maylandia_zebra
ENSSDUG00000015182	-	84	51.630	ENSMZEG00005019918	-	94	57.303	Maylandia_zebra
ENSSDUG00000015182	-	78	54.864	ENSMZEG00005021052	-	89	58.741	Maylandia_zebra
ENSSDUG00000015182	-	76	52.913	ENSMZEG00005026082	-	80	52.153	Maylandia_zebra
ENSSDUG00000015182	-	83	58.416	ENSMMOG00000010703	-	99	58.416	Mola_mola
ENSSDUG00000015182	-	69	54.297	ENSMMOG00000006131	-	89	54.054	Mola_mola
ENSSDUG00000015182	-	88	55.678	ENSMMOG00000004460	-	99	55.678	Mola_mola
ENSSDUG00000015182	-	87	53.571	ENSMALG00000007051	-	100	55.438	Monopterus_albus
ENSSDUG00000015182	-	89	49.213	ENSMALG00000004216	-	98	52.212	Monopterus_albus
ENSSDUG00000015182	-	89	49.679	ENSMALG00000015655	-	100	56.731	Monopterus_albus
ENSSDUG00000015182	-	68	56.034	MGP_PahariEiJ_G0022533	Zfp637	76	51.813	Mus_pahari
ENSSDUG00000015182	-	67	56.034	MGP_SPRETEiJ_G0029809	Zfp637	71	51.813	Mus_spretus
ENSSDUG00000015182	-	77	51.295	ENSNGAG00000020281	Zfp637	89	51.295	Nannospalax_galili
ENSSDUG00000015182	-	71	45.098	ENSNBRG00000005849	-	90	45.098	Neolamprologus_brichardi
ENSSDUG00000015182	-	66	40.462	ENSNBRG00000016564	-	81	40.462	Neolamprologus_brichardi
ENSSDUG00000015182	-	92	50.379	ENSNBRG00000000523	-	96	49.811	Neolamprologus_brichardi
ENSSDUG00000015182	-	73	50.187	ENSNBRG00000003000	-	80	50.187	Neolamprologus_brichardi
ENSSDUG00000015182	-	65	43.567	ENSNBRG00000005796	-	96	43.567	Neolamprologus_brichardi
ENSSDUG00000015182	-	73	43.732	ENSNBRG00000005805	-	94	43.732	Neolamprologus_brichardi
ENSSDUG00000015182	-	73	41.333	ENSONIG00000005693	-	94	45.408	Oreochromis_niloticus
ENSSDUG00000015182	-	81	46.866	ENSONIG00000015514	-	96	46.866	Oreochromis_niloticus
ENSSDUG00000015182	-	65	42.308	ENSONIG00000015552	-	94	42.308	Oreochromis_niloticus
ENSSDUG00000015182	-	77	50.777	ENSOARG00000002999	ZNF32	89	50.777	Ovis_aries
ENSSDUG00000015182	-	67	48.475	ENSPLAG00000015973	-	99	48.475	Poecilia_latipinna
ENSSDUG00000015182	-	85	49.020	ENSPMEG00000006726	-	88	55.618	Poecilia_mexicana
ENSSDUG00000015182	-	90	44.510	ENSPMEG00000016458	-	98	51.852	Poecilia_mexicana
ENSSDUG00000015182	-	69	52.201	ENSPREG00000010437	-	89	52.201	Poecilia_reticulata
ENSSDUG00000015182	-	73	46.749	ENSPCAG00000005270	-	98	46.749	Procavia_capensis
ENSSDUG00000015182	-	71	49.337	ENSPVAG00000009430	-	87	53.009	Pteropus_vampyrus
ENSSDUG00000015182	-	84	57.491	ENSPNYG00000002684	-	99	57.491	Pundamilia_nyererei
ENSSDUG00000015182	-	84	54.113	ENSPNYG00000007597	-	98	51.793	Pundamilia_nyererei
ENSSDUG00000015182	-	69	52.889	ENSPNAG00000029997	-	86	52.889	Pygocentrus_nattereri
ENSSDUG00000015182	-	74	44.987	ENSSFOG00015015878	-	91	49.407	Scleropages_formosus
ENSSDUG00000015182	-	84	55.779	ENSSLDG00000018273	-	90	55.779	Seriola_lalandi_dorsalis
ENSSDUG00000015182	-	98	57.219	ENSSLDG00000020675	-	100	59.506	Seriola_lalandi_dorsalis
ENSSDUG00000015182	-	94	53.239	ENSSLDG00000012036	-	96	58.599	Seriola_lalandi_dorsalis
ENSSDUG00000015182	-	67	49.235	ENSSARG00000000532	-	85	49.235	Sorex_araneus
ENSSDUG00000015182	-	84	55.823	ENSXCOG00000008116	-	99	55.823	Xiphophorus_couchianus