EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000015364 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1704 bases
Position: chrBDQW01001179.1:3328-5031
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000021124	RVT_1	PF00078.27	5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000021505	-	1704	-	ENSSDUP00000021124	462 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000015364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000015364	-	51	30.802	ENSSDUG00000017945	-	63	30.702
ENSSDUG00000015364	-	71	33.232	ENSSDUG00000000789	-	55	33.232
ENSSDUG00000015364	-	58	35.075	ENSSDUG00000021791	-	89	35.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015364	-	54	36.759	ENSAPOG00000015742	-	79	36.759	Acanthochromis_polyacanthus
ENSSDUG00000015364	-	53	31.452	ENSAPOG00000014771	-	61	31.452	Acanthochromis_polyacanthus
ENSSDUG00000015364	-	71	34.639	ENSACIG00000010538	-	86	34.639	Amphilophus_citrinellus
ENSSDUG00000015364	-	55	39.844	ENSACIG00000020856	-	55	39.844	Amphilophus_citrinellus
ENSSDUG00000015364	-	68	33.540	ENSAOCG00000019069	-	86	33.540	Amphiprion_ocellaris
ENSSDUG00000015364	-	64	33.007	ENSAOCG00000012592	-	71	33.007	Amphiprion_ocellaris
ENSSDUG00000015364	-	51	39.754	ENSAOCG00000000894	-	77	38.491	Amphiprion_ocellaris
ENSSDUG00000015364	-	68	31.889	ENSAOCG00000014605	-	67	31.889	Amphiprion_ocellaris
ENSSDUG00000015364	-	71	33.030	ENSATEG00000019721	-	86	33.731	Anabas_testudineus
ENSSDUG00000015364	-	52	37.917	ENSACAG00000010816	-	67	37.917	Anolis_carolinensis
ENSSDUG00000015364	-	74	30.659	ENSACLG00000013571	-	86	30.659	Astatotilapia_calliptera
ENSSDUG00000015364	-	93	32.339	ENSACLG00000015899	-	58	32.339	Astatotilapia_calliptera
ENSSDUG00000015364	-	77	34.435	ENSACLG00000012857	-	98	34.435	Astatotilapia_calliptera
ENSSDUG00000015364	-	65	37.705	ENSACLG00000011319	-	79	37.705	Astatotilapia_calliptera
ENSSDUG00000015364	-	64	34.437	ENSAMXG00000035718	-	57	34.437	Astyanax_mexicanus
ENSSDUG00000015364	-	52	40.574	ENSAMXG00000041014	-	92	40.574	Astyanax_mexicanus
ENSSDUG00000015364	-	53	36.948	ENSAMXG00000040763	-	63	36.948	Astyanax_mexicanus
ENSSDUG00000015364	-	65	36.093	ENSAMXG00000038901	-	63	36.093	Astyanax_mexicanus
ENSSDUG00000015364	-	67	31.949	ENSCVAG00000020933	-	68	31.949	Cyprinodon_variegatus
ENSSDUG00000015364	-	71	31.515	ENSCVAG00000018360	-	79	31.515	Cyprinodon_variegatus
ENSSDUG00000015364	-	70	34.251	ENSELUG00000002589	-	69	34.251	Esox_lucius
ENSSDUG00000015364	-	67	35.463	ENSELUG00000000386	-	69	35.463	Esox_lucius
ENSSDUG00000015364	-	73	31.672	ENSGAGG00000013921	-	91	31.672	Gopherus_agassizii
ENSSDUG00000015364	-	76	36.901	ENSHBUG00000011715	-	90	36.901	Haplochromis_burtoni
ENSSDUG00000015364	-	79	32.440	ENSHBUG00000007736	-	89	33.244	Haplochromis_burtoni
ENSSDUG00000015364	-	71	30.909	ENSKMAG00000014393	-	77	30.909	Kryptolebias_marmoratus
ENSSDUG00000015364	-	95	32.237	ENSLBEG00000015758	-	67	32.237	Labrus_bergylta
ENSSDUG00000015364	-	64	33.663	ENSLBEG00000020242	-	82	33.663	Labrus_bergylta
ENSSDUG00000015364	-	60	35.336	ENSLBEG00000004148	-	57	35.336	Labrus_bergylta
ENSSDUG00000015364	-	95	31.637	ENSLACG00000022265	-	57	31.637	Latimeria_chalumnae
ENSSDUG00000015364	-	87	30.120	ENSLOCG00000000179	-	62	30.120	Lepisosteus_oculatus
ENSSDUG00000015364	-	74	36.648	ENSMZEG00005025877	-	81	36.648	Maylandia_zebra
ENSSDUG00000015364	-	74	36.648	ENSMZEG00005008304	-	81	36.648	Maylandia_zebra
ENSSDUG00000015364	-	71	34.524	ENSMZEG00005011529	-	62	34.524	Maylandia_zebra
ENSSDUG00000015364	-	77	33.884	ENSMZEG00005017030	-	68	33.884	Maylandia_zebra
ENSSDUG00000015364	-	90	34.186	ENSMZEG00005021767	-	53	34.186	Maylandia_zebra
ENSSDUG00000015364	-	58	37.687	ENSMZEG00005016362	-	94	37.687	Maylandia_zebra
ENSSDUG00000015364	-	56	33.588	ENSNBRG00000001934	-	56	33.588	Neolamprologus_brichardi
ENSSDUG00000015364	-	54	36.653	ENSNBRG00000022130	-	60	36.653	Neolamprologus_brichardi
ENSSDUG00000015364	-	64	33.557	ENSNBRG00000000972	-	73	33.557	Neolamprologus_brichardi
ENSSDUG00000015364	-	64	31.023	ENSNBRG00000012595	-	68	31.023	Neolamprologus_brichardi
ENSSDUG00000015364	-	51	35.593	ENSNBRG00000013792	-	68	35.593	Neolamprologus_brichardi
ENSSDUG00000015364	-	97	33.407	ENSONIG00000021275	-	60	33.407	Oreochromis_niloticus
ENSSDUG00000015364	-	64	38.284	ENSORLG00000028454	-	95	38.284	Oryzias_latipes
ENSSDUG00000015364	-	70	33.537	ENSORLG00000023713	-	83	33.537	Oryzias_latipes
ENSSDUG00000015364	-	68	33.962	ENSORLG00000024236	-	83	33.962	Oryzias_latipes
ENSSDUG00000015364	-	75	30.595	ENSORLG00000024464	-	63	30.595	Oryzias_latipes
ENSSDUG00000015364	-	90	31.754	ENSORLG00000028313	-	50	31.754	Oryzias_latipes
ENSSDUG00000015364	-	90	32.471	ENSORLG00000030415	-	52	32.471	Oryzias_latipes
ENSSDUG00000015364	-	52	38.430	ENSORLG00020007779	-	65	38.430	Oryzias_latipes_hni
ENSSDUG00000015364	-	51	39.076	ENSORLG00020018629	-	63	39.076	Oryzias_latipes_hni
ENSSDUG00000015364	-	90	31.754	ENSORLG00020003980	-	51	31.754	Oryzias_latipes_hni
ENSSDUG00000015364	-	52	37.295	ENSORLG00020007002	-	96	37.295	Oryzias_latipes_hni
ENSSDUG00000015364	-	67	35.783	ENSORLG00020014149	-	97	35.783	Oryzias_latipes_hni
ENSSDUG00000015364	-	70	36.280	ENSORLG00020014626	-	61	36.280	Oryzias_latipes_hni
ENSSDUG00000015364	-	52	31.250	ENSORLG00020004063	-	70	31.250	Oryzias_latipes_hni
ENSSDUG00000015364	-	51	39.496	ENSORLG00015007703	-	61	39.496	Oryzias_latipes_hsok
ENSSDUG00000015364	-	73	31.672	ENSORLG00015021206	-	65	31.672	Oryzias_latipes_hsok
ENSSDUG00000015364	-	63	34.564	ENSORLG00015022393	-	99	34.564	Oryzias_latipes_hsok
ENSSDUG00000015364	-	60	30.282	ENSORLG00015021848	-	93	30.282	Oryzias_latipes_hsok
ENSSDUG00000015364	-	67	33.648	ENSORLG00015000419	-	89	33.648	Oryzias_latipes_hsok
ENSSDUG00000015364	-	73	36.888	ENSORLG00015020895	-	91	36.888	Oryzias_latipes_hsok
ENSSDUG00000015364	-	60	35.986	ENSORLG00015008227	-	79	35.986	Oryzias_latipes_hsok
ENSSDUG00000015364	-	50	33.333	ENSOMEG00000013211	-	54	33.333	Oryzias_melastigma
ENSSDUG00000015364	-	66	47.727	ENSPMGG00000014421	-	73	47.727	Periophthalmus_magnuspinnatus
ENSSDUG00000015364	-	76	36.212	ENSPLAG00000015080	-	85	36.212	Poecilia_latipinna
ENSSDUG00000015364	-	91	32.483	ENSPMEG00000010792	-	54	32.483	Poecilia_mexicana
ENSSDUG00000015364	-	68	32.399	ENSPREG00000001352	-	89	32.399	Poecilia_reticulata
ENSSDUG00000015364	-	56	42.045	ENSPREG00000010319	-	63	42.045	Poecilia_reticulata
ENSSDUG00000015364	-	76	37.326	ENSPREG00000004933	-	89	37.326	Poecilia_reticulata
ENSSDUG00000015364	-	56	35.115	ENSPNYG00000002466	-	87	35.115	Pundamilia_nyererei
ENSSDUG00000015364	-	55	33.725	ENSPNYG00000002652	-	66	33.725	Pundamilia_nyererei
ENSSDUG00000015364	-	62	36.552	ENSPNYG00000023697	-	67	36.552	Pundamilia_nyererei
ENSSDUG00000015364	-	75	34.375	ENSPNAG00000002786	-	84	34.375	Pygocentrus_nattereri
ENSSDUG00000015364	-	52	38.525	ENSPNAG00000014375	-	59	38.525	Pygocentrus_nattereri
ENSSDUG00000015364	-	50	35.498	ENSPNAG00000010342	-	75	35.498	Pygocentrus_nattereri
ENSSDUG00000015364	-	70	34.146	ENSPNAG00000024749	-	77	34.146	Pygocentrus_nattereri
ENSSDUG00000015364	-	58	32.353	ENSSMAG00000014015	-	58	32.353	Scophthalmus_maximus
ENSSDUG00000015364	-	63	31.987	ENSSLDG00000006955	-	69	31.987	Seriola_lalandi_dorsalis
ENSSDUG00000015364	-	71	34.242	ENSSPUG00000015446	-	74	34.242	Sphenodon_punctatus
ENSSDUG00000015364	-	73	31.765	ENSSPAG00000012089	-	92	31.765	Stegastes_partitus
ENSSDUG00000015364	-	67	33.121	ENSSPAG00000000151	-	68	33.121	Stegastes_partitus
ENSSDUG00000015364	-	82	32.898	ENSXETG00000030860	-	50	32.898	Xenopus_tropicalis
ENSSDUG00000015364	-	55	37.402	ENSXCOG00000016894	-	75	37.402	Xiphophorus_couchianus
ENSSDUG00000015364	-	63	32.323	ENSXMAG00000026184	-	99	32.323	Xiphophorus_maculatus
ENSSDUG00000015364	-	75	38.000	ENSXMAG00000023211	-	77	38.000	Xiphophorus_maculatus