EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000015369 (Gene tree)
Gene ID: -
Gene Symbol: matr3l1.1
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: uncharacterized LOC111233519
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 35655 bases
Position: chrBDQW01000398.1:20322-55976
Accession: 111233519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000021127	RRM_5	PF13893.6	7.2e-08	1	1
ENSSDUP00000021144	RRM_5	PF13893.6	7.2e-08	1	1
ENSSDUP00000021183	RRM_5	PF13893.6	7.2e-08	1	1
ENSSDUP00000021221	RRM_5	PF13893.6	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000021508	-	4335	-	ENSSDUP00000021127	1126 (aa)	-	-
ENSSDUT00000021571	-	4335	-	ENSSDUP00000021183	1126 (aa)	-	-
ENSSDUT00000021612	-	4335	XM_022761349	ENSSDUP00000021221	1126 (aa)	XP_022617070	-
ENSSDUT00000021528	-	4335	-	ENSSDUP00000021144	1126 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000015369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSG00000015479	MATR3	99	40.000	Homo_sapiens
ENSSDUG00000015369	matr3l1.1	74	51.515	ENSAMEG00000011347	-	58	55.556	Ailuropoda_melanoleuca
ENSSDUG00000015369	matr3l1.1	96	38.211	ENSAPLG00000008118	-	76	40.556	Anas_platyrhynchos
ENSSDUG00000015369	matr3l1.1	88	53.030	ENSACAG00000016233	-	58	57.407	Anolis_carolinensis
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSANAG00000022951	-	62	55.556	Aotus_nancymaae
ENSSDUG00000015369	matr3l1.1	53	35.256	ENSANAG00000024654	-	73	35.256	Aotus_nancymaae
ENSSDUG00000015369	matr3l1.1	69	64.054	ENSACLG00000015903	matr3l1.1	77	62.575	Astatotilapia_calliptera
ENSSDUG00000015369	matr3l1.1	99	53.947	ENSAMXG00000010685	matr3l1.1	95	57.671	Astyanax_mexicanus
ENSSDUG00000015369	matr3l1.1	68	35.821	ENSBTAG00000006756	MATR3	55	40.223	Bos_taurus
ENSSDUG00000015369	matr3l1.1	72	51.471	ENSCJAG00000006888	-	59	55.556	Callithrix_jacchus
ENSSDUG00000015369	matr3l1.1	75	51.515	ENSCAFG00000001345	MATR3	61	55.556	Canis_familiaris
ENSSDUG00000015369	matr3l1.1	73	53.846	ENSCAFG00020010504	-	60	53.846	Canis_lupus_dingo
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSCHIG00000025746	-	61	55.556	Capra_hircus
ENSSDUG00000015369	matr3l1.1	59	51.471	ENSTSYG00000011028	-	62	55.556	Carlito_syrichta
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSCPOG00000014076	-	62	55.556	Cavia_porcellus
ENSSDUG00000015369	matr3l1.1	59	51.471	ENSCCAG00000025074	-	62	55.556	Cebus_capucinus
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSCLAG00000015998	-	62	55.556	Chinchilla_lanigera
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSCSAG00000013075	-	62	55.556	Chlorocebus_sabaeus
ENSSDUG00000015369	matr3l1.1	84	39.200	ENSCPBG00000006303	-	65	39.444	Chrysemys_picta_bellii
ENSSDUG00000015369	matr3l1.1	53	51.471	ENSCANG00000028224	-	67	55.556	Colobus_angolensis_palliatus
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSCGRG00001020227	Matr3	62	55.556	Cricetulus_griseus_chok1gshd
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSCGRG00000011298	Matr3	62	55.556	Cricetulus_griseus_crigri
ENSSDUG00000015369	matr3l1.1	58	51.923	ENSEASG00005020857	-	61	53.704	Equus_asinus_asinus
ENSSDUG00000015369	matr3l1.1	70	50.000	ENSECAG00000012882	MATR3	61	53.704	Equus_caballus
ENSSDUG00000015369	matr3l1.1	92	43.860	ENSELUG00000021651	si:ch211-271b14.1	81	43.860	Esox_lucius
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSFCAG00000021911	-	61	55.556	Felis_catus
ENSSDUG00000015369	matr3l1.1	70	55.556	ENSFALG00000003071	-	68	61.111	Ficedula_albicollis
ENSSDUG00000015369	matr3l1.1	70	51.515	ENSFDAG00000017675	-	62	55.556	Fukomys_damarensis
ENSSDUG00000015369	matr3l1.1	96	36.905	ENSGALG00000002478	MATR3	68	61.111	Gallus_gallus
ENSSDUG00000015369	matr3l1.1	84	39.200	ENSGAGG00000011386	-	65	39.444	Gopherus_agassizii
ENSSDUG00000015369	matr3l1.1	60	52.941	ENSGGOG00000007308	-	62	57.407	Gorilla_gorilla
ENSSDUG00000015369	matr3l1.1	70	51.515	ENSHGLG00000004673	MATR3	62	55.556	Heterocephalus_glaber_female
ENSSDUG00000015369	matr3l1.1	61	43.878	ENSSTOG00000014746	-	64	45.882	Ictidomys_tridecemlineatus
ENSSDUG00000015369	matr3l1.1	59	51.471	ENSJJAG00000021710	-	62	55.556	Jaculus_jaculus
ENSSDUG00000015369	matr3l1.1	89	71.598	ENSLBEG00000018267	matr3l1.1	99	71.302	Labrus_bergylta
ENSSDUG00000015369	matr3l1.1	74	54.545	ENSLACG00000006743	-	68	56.364	Latimeria_chalumnae
ENSSDUG00000015369	matr3l1.1	67	36.546	ENSMMUG00000016741	MATR3	58	55.556	Macaca_mulatta
ENSSDUG00000015369	matr3l1.1	58	37.900	ENSMMUG00000015963	-	91	40.223	Macaca_mulatta
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSMNEG00000042856	-	64	55.556	Macaca_nemestrina
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSMLEG00000041178	-	64	55.556	Mandrillus_leucophaeus
ENSSDUG00000015369	matr3l1.1	96	38.211	ENSMGAG00000001331	-	75	41.111	Meleagris_gallopavo
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSMAUG00000011647	Matr3	62	55.556	Mesocricetus_auratus
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSMOCG00000015711	Matr3	62	55.556	Microtus_ochrogaster
ENSSDUG00000015369	matr3l1.1	79	31.712	ENSMODG00000011925	-	61	55.556	Monodelphis_domestica
ENSSDUG00000015369	matr3l1.1	79	35.714	MGP_CAROLIEiJ_G0022108	Matr3	62	55.556	Mus_caroli
ENSSDUG00000015369	matr3l1.1	79	35.714	ENSMUSG00000037236	Matr3	62	55.556	Mus_musculus
ENSSDUG00000015369	matr3l1.1	60	51.471	MGP_PahariEiJ_G0018842	Matr3	62	55.556	Mus_pahari
ENSSDUG00000015369	matr3l1.1	79	35.714	MGP_SPRETEiJ_G0023020	Matr3	62	55.556	Mus_spretus
ENSSDUG00000015369	matr3l1.1	74	51.515	ENSMPUG00000009297	-	60	55.556	Mustela_putorius_furo
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSMLUG00000005798	-	64	45.882	Myotis_lucifugus
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSNGAG00000017452	Matr3	62	55.556	Nannospalax_galili
ENSSDUG00000015369	matr3l1.1	60	51.471	ENSNLEG00000009093	-	62	55.556	Nomascus_leucogenys
ENSSDUG00000015369	matr3l1.1	71	55.556	ENSOPRG00000016511	-	59	55.556	Ochotona_princeps
ENSSDUG00000015369	matr3l1.1	75	43.878	ENSODEG00000003015	-	64	45.882	Octodon_degus
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSOCUG00000026311	MATR3	62	55.556	Oryctolagus_cuniculus
ENSSDUG00000015369	matr3l1.1	99	64.727	ENSORLG00020009362	matr3l1.1	61	75.140	Oryzias_latipes_hni
ENSSDUG00000015369	matr3l1.1	59	51.471	ENSOGAG00000010607	-	62	55.556	Otolemur_garnettii
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSOARG00000016931	-	61	55.556	Ovis_aries
ENSSDUG00000015369	matr3l1.1	64	35.714	ENSPPAG00000026720	-	62	55.556	Pan_paniscus
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSPPRG00000008004	-	61	55.556	Panthera_pardus
ENSSDUG00000015369	matr3l1.1	59	51.515	ENSPTIG00000010711	-	64	55.556	Panthera_tigris_altaica
ENSSDUG00000015369	matr3l1.1	53	51.471	ENSPANG00000012018	-	62	55.556	Papio_anubis
ENSSDUG00000015369	matr3l1.1	84	37.398	ENSPSIG00000014598	-	57	61.111	Pelodiscus_sinensis
ENSSDUG00000015369	matr3l1.1	73	45.000	ENSPEMG00000020679	Matr3	64	47.059	Peromyscus_maniculatus_bairdii
ENSSDUG00000015369	matr3l1.1	66	36.546	ENSPCOG00000025718	-	62	55.556	Propithecus_coquereli
ENSSDUG00000015369	matr3l1.1	79	35.714	ENSRNOG00000019875	Matr3	62	55.556	Rattus_norvegicus
ENSSDUG00000015369	matr3l1.1	79	35.714	ENSRROG00000043949	-	61	55.556	Rhinopithecus_roxellana
ENSSDUG00000015369	matr3l1.1	53	51.471	ENSRROG00000039415	-	65	55.556	Rhinopithecus_roxellana
ENSSDUG00000015369	matr3l1.1	82	53.846	ENSSBOG00000030159	-	62	55.556	Saimiri_boliviensis_boliviensis
ENSSDUG00000015369	matr3l1.1	79	31.983	ENSSHAG00000010331	-	61	57.407	Sarcophilus_harrisii
ENSSDUG00000015369	matr3l1.1	50	47.458	ENSSFOG00015001838	-	58	62.097	Scleropages_formosus
ENSSDUG00000015369	matr3l1.1	72	36.937	ENSSPUG00000019236	-	57	61.111	Sphenodon_punctatus
ENSSDUG00000015369	matr3l1.1	75	51.515	ENSSSCG00000014343	-	61	55.556	Sus_scrofa
ENSSDUG00000015369	matr3l1.1	74	40.556	ENSTGUG00000014568	MATR3	68	61.111	Taeniopygia_guttata
ENSSDUG00000015369	matr3l1.1	67	58.708	ENSTRUG00000001692	-	69	59.403	Takifugu_rubripes
ENSSDUG00000015369	matr3l1.1	86	64.115	ENSTNIG00000003166	matr3l1.1	97	59.944	Tetraodon_nigroviridis
ENSSDUG00000015369	matr3l1.1	69	35.821	ENSUAMG00000000097	-	63	40.223	Ursus_americanus
ENSSDUG00000015369	matr3l1.1	74	51.515	ENSUMAG00000015808	-	61	55.556	Ursus_maritimus
ENSSDUG00000015369	matr3l1.1	75	43.878	ENSVPAG00000006337	-	61	45.882	Vicugna_pacos
ENSSDUG00000015369	matr3l1.1	58	53.846	ENSVVUG00000020287	-	61	55.556	Vulpes_vulpes
ENSSDUG00000015369	matr3l1.1	98	57.143	ENSXETG00000003838	matr3	62	48.438	Xenopus_tropicalis
ENSSDUG00000015369	matr3l1.1	71	50.231	ENSXMAG00000014107	-	90	50.939	Xiphophorus_maculatus