EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000015508 (Gene tree)
Gene ID: 111236204
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4802 bases
Position: chrBDQW01000592.1:193484-198285
Accession: 111236204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000021301	TRM13	PF05206.14	1.8e-80	1	1
ENSSDUP00000021301	zf-U11-48K	PF05253.12	1.3e-08	1	1
ENSSDUP00000021301	zf-TRM13_CCCH	PF11722.8	9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000021693	-	1988	XM_022764871	ENSSDUP00000021301	486 (aa)	XP_022620592	UPI000BBE4B7A

Gene Model

Click here to download ENSSDUG00000015508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015508	trmt13	99	50.303	ENSG00000122435	TRMT13	99	55.046	Homo_sapiens
ENSSDUG00000015508	trmt13	96	73.939	ENSAPOG00000015131	trmt13	99	74.898	Acanthochromis_polyacanthus
ENSSDUG00000015508	trmt13	97	50.518	ENSAMEG00000008917	TRMT13	95	50.844	Ailuropoda_melanoleuca
ENSSDUG00000015508	trmt13	97	74.947	ENSACIG00000005804	trmt13	94	74.947	Amphilophus_citrinellus
ENSSDUG00000015508	trmt13	96	73.547	ENSAOCG00000023585	trmt13	99	73.441	Amphiprion_ocellaris
ENSSDUG00000015508	trmt13	96	73.747	ENSAPEG00000004025	trmt13	99	73.642	Amphiprion_percula
ENSSDUG00000015508	trmt13	97	75.319	ENSATEG00000006597	trmt13	96	76.139	Anabas_testudineus
ENSSDUG00000015508	trmt13	87	51.142	ENSAPLG00000014924	TRMT13	98	51.613	Anas_platyrhynchos
ENSSDUG00000015508	trmt13	96	52.183	ENSACAG00000003498	TRMT13	97	52.301	Anolis_carolinensis
ENSSDUG00000015508	trmt13	99	50.101	ENSANAG00000019525	TRMT13	98	55.556	Aotus_nancymaae
ENSSDUG00000015508	trmt13	97	73.830	ENSACLG00000020018	trmt13	99	74.353	Astatotilapia_calliptera
ENSSDUG00000015508	trmt13	97	53.265	ENSAMXG00000017963	trmt13	99	53.265	Astyanax_mexicanus
ENSSDUG00000015508	trmt13	97	50.932	ENSBTAG00000015781	TRMT13	95	51.055	Bos_taurus
ENSSDUG00000015508	trmt13	99	49.899	ENSCJAG00000000200	TRMT13	97	55.556	Callithrix_jacchus
ENSSDUG00000015508	trmt13	65	48.193	ENSCAFG00000020021	TRMT13	96	48.916	Canis_familiaris
ENSSDUG00000015508	trmt13	57	54.839	ENSCAFG00020011572	TRMT13	94	54.839	Canis_lupus_dingo
ENSSDUG00000015508	trmt13	97	49.692	ENSCHIG00000015395	TRMT13	96	50.000	Capra_hircus
ENSSDUG00000015508	trmt13	96	49.896	ENSTSYG00000010811	TRMT13	97	50.943	Carlito_syrichta
ENSSDUG00000015508	trmt13	73	38.440	ENSCAPG00000009085	TRMT13	96	39.503	Cavia_aperea
ENSSDUG00000015508	trmt13	98	50.305	ENSCPOG00000000694	TRMT13	98	50.308	Cavia_porcellus
ENSSDUG00000015508	trmt13	99	50.505	ENSCCAG00000023772	TRMT13	98	55.556	Cebus_capucinus
ENSSDUG00000015508	trmt13	99	50.707	ENSCATG00000033556	TRMT13	98	57.407	Cercocebus_atys
ENSSDUG00000015508	trmt13	88	50.345	ENSCLAG00000008220	TRMT13	98	50.704	Chinchilla_lanigera
ENSSDUG00000015508	trmt13	99	50.505	ENSCSAG00000001506	TRMT13	98	50.823	Chlorocebus_sabaeus
ENSSDUG00000015508	trmt13	98	50.000	ENSCPBG00000026671	TRMT13	97	50.207	Chrysemys_picta_bellii
ENSSDUG00000015508	trmt13	99	50.505	ENSCANG00000034659	TRMT13	98	56.481	Colobus_angolensis_palliatus
ENSSDUG00000015508	trmt13	99	49.598	ENSCGRG00001021601	Trmt13	98	50.102	Cricetulus_griseus_chok1gshd
ENSSDUG00000015508	trmt13	52	46.269	ENSCGRG00000000093	-	96	47.104	Cricetulus_griseus_crigri
ENSSDUG00000015508	trmt13	99	67.083	ENSCSEG00000000591	trmt13	99	67.296	Cynoglossus_semilaevis
ENSSDUG00000015508	trmt13	96	71.488	ENSCVAG00000017342	trmt13	94	71.368	Cyprinodon_variegatus
ENSSDUG00000015508	trmt13	96	55.414	ENSDARG00000102846	trmt13	97	55.414	Danio_rerio
ENSSDUG00000015508	trmt13	55	55.762	ENSDNOG00000001710	TRMT13	80	55.762	Dasypus_novemcinctus
ENSSDUG00000015508	trmt13	97	49.588	ENSDORG00000015808	Trmt13	95	49.895	Dipodomys_ordii
ENSSDUG00000015508	trmt13	97	33.197	FBgn0037435	CG18048	96	33.333	Drosophila_melanogaster
ENSSDUG00000015508	trmt13	96	45.697	ENSETEG00000005819	TRMT13	96	45.851	Echinops_telfairi
ENSSDUG00000015508	trmt13	79	59.259	ENSEBUG00000014444	trmt13	96	44.156	Eptatretus_burgeri
ENSSDUG00000015508	trmt13	96	50.628	ENSEASG00005015918	TRMT13	95	50.633	Equus_asinus_asinus
ENSSDUG00000015508	trmt13	96	50.418	ENSECAG00000022626	TRMT13	95	50.422	Equus_caballus
ENSSDUG00000015508	trmt13	72	54.237	ENSEEUG00000000294	TRMT13	72	53.704	Erinaceus_europaeus
ENSSDUG00000015508	trmt13	97	55.602	ENSELUG00000003803	trmt13	99	56.576	Esox_lucius
ENSSDUG00000015508	trmt13	99	49.091	ENSFCAG00000030618	TRMT13	98	50.000	Felis_catus
ENSSDUG00000015508	trmt13	95	51.907	ENSFALG00000002424	TRMT13	95	52.026	Ficedula_albicollis
ENSSDUG00000015508	trmt13	98	49.091	ENSFDAG00000006342	TRMT13	97	48.980	Fukomys_damarensis
ENSSDUG00000015508	trmt13	81	73.980	ENSFHEG00000022954	trmt13	100	73.671	Fundulus_heteroclitus
ENSSDUG00000015508	trmt13	94	54.585	ENSGMOG00000013223	trmt13	100	54.803	Gadus_morhua
ENSSDUG00000015508	trmt13	95	51.168	ENSGALG00000005290	TRMT13	99	50.410	Gallus_gallus
ENSSDUG00000015508	trmt13	78	67.717	ENSGAFG00000001577	trmt13	82	67.717	Gambusia_affinis
ENSSDUG00000015508	trmt13	98	76.261	ENSGACG00000013428	trmt13	99	77.966	Gasterosteus_aculeatus
ENSSDUG00000015508	trmt13	96	51.037	ENSGAGG00000023303	TRMT13	97	57.818	Gopherus_agassizii
ENSSDUG00000015508	trmt13	99	50.101	ENSGGOG00000005616	TRMT13	99	55.046	Gorilla_gorilla
ENSSDUG00000015508	trmt13	97	74.255	ENSHBUG00000007754	trmt13	99	74.784	Haplochromis_burtoni
ENSSDUG00000015508	trmt13	98	49.287	ENSHGLG00000002164	TRMT13	97	49.177	Heterocephalus_glaber_female
ENSSDUG00000015508	trmt13	98	49.287	ENSHGLG00100001618	TRMT13	97	49.177	Heterocephalus_glaber_male
ENSSDUG00000015508	trmt13	97	55.115	ENSHCOG00000020553	trmt13	98	55.085	Hippocampus_comes
ENSSDUG00000015508	trmt13	97	55.021	ENSIPUG00000024787	trmt13	99	55.346	Ictalurus_punctatus
ENSSDUG00000015508	trmt13	97	49.275	ENSSTOG00000013483	TRMT13	95	49.789	Ictidomys_tridecemlineatus
ENSSDUG00000015508	trmt13	98	49.696	ENSJJAG00000018012	Trmt13	98	49.590	Jaculus_jaculus
ENSSDUG00000015508	trmt13	64	69.968	ENSKMAG00000007639	trmt13	87	70.548	Kryptolebias_marmoratus
ENSSDUG00000015508	trmt13	96	74.262	ENSLBEG00000020238	trmt13	99	75.159	Labrus_bergylta
ENSSDUG00000015508	trmt13	96	52.201	ENSLACG00000013153	TRMT13	99	50.614	Latimeria_chalumnae
ENSSDUG00000015508	trmt13	97	53.958	ENSLOCG00000000418	trmt13	99	54.167	Lepisosteus_oculatus
ENSSDUG00000015508	trmt13	75	51.724	ENSLAFG00000002383	TRMT13	96	51.613	Loxodonta_africana
ENSSDUG00000015508	trmt13	99	50.505	ENSMFAG00000034681	TRMT13	98	56.481	Macaca_fascicularis
ENSSDUG00000015508	trmt13	99	50.505	ENSMMUG00000004243	TRMT13	98	56.481	Macaca_mulatta
ENSSDUG00000015508	trmt13	99	50.505	ENSMNEG00000036102	TRMT13	98	56.481	Macaca_nemestrina
ENSSDUG00000015508	trmt13	99	50.303	ENSMLEG00000034258	TRMT13	98	55.556	Mandrillus_leucophaeus
ENSSDUG00000015508	trmt13	96	78.678	ENSMAMG00000016597	trmt13	95	79.176	Mastacembelus_armatus
ENSSDUG00000015508	trmt13	97	73.830	ENSMZEG00005020959	trmt13	99	74.353	Maylandia_zebra
ENSSDUG00000015508	trmt13	87	52.074	ENSMGAG00000006970	TRMT13	98	52.558	Meleagris_gallopavo
ENSSDUG00000015508	trmt13	98	49.287	ENSMAUG00000010448	Trmt13	96	50.000	Mesocricetus_auratus
ENSSDUG00000015508	trmt13	97	51.340	ENSMICG00000005283	TRMT13	95	51.681	Microcebus_murinus
ENSSDUG00000015508	trmt13	98	49.491	ENSMOCG00000019914	Trmt13	96	50.207	Microtus_ochrogaster
ENSSDUG00000015508	trmt13	55	66.791	ENSMMOG00000007762	trmt13	90	66.791	Mola_mola
ENSSDUG00000015508	trmt13	99	48.594	ENSMODG00000003646	TRMT13	98	48.875	Monodelphis_domestica
ENSSDUG00000015508	trmt13	97	74.841	ENSMALG00000020965	trmt13	97	75.269	Monopterus_albus
ENSSDUG00000015508	trmt13	98	49.388	MGP_CAROLIEiJ_G0025568	Trmt13	99	52.174	Mus_caroli
ENSSDUG00000015508	trmt13	98	49.695	ENSMUSG00000033439	Trmt13	98	52.198	Mus_musculus
ENSSDUG00000015508	trmt13	99	49.293	MGP_PahariEiJ_G0027014	Trmt13	99	51.087	Mus_pahari
ENSSDUG00000015508	trmt13	98	50.102	MGP_SPRETEiJ_G0026518	Trmt13	98	52.198	Mus_spretus
ENSSDUG00000015508	trmt13	78	50.000	ENSMPUG00000002078	-	96	50.404	Mustela_putorius_furo
ENSSDUG00000015508	trmt13	97	50.617	ENSMLUG00000002124	TRMT13	95	51.572	Myotis_lucifugus
ENSSDUG00000015508	trmt13	97	69.133	ENSNBRG00000006783	trmt13	98	69.593	Neolamprologus_brichardi
ENSSDUG00000015508	trmt13	99	50.101	ENSNLEG00000035917	TRMT13	98	55.556	Nomascus_leucogenys
ENSSDUG00000015508	trmt13	52	45.850	ENSMEUG00000013346	-	99	45.850	Notamacropus_eugenii
ENSSDUG00000015508	trmt13	65	56.716	ENSOPRG00000012048	TRMT13	54	56.391	Ochotona_princeps
ENSSDUG00000015508	trmt13	97	74.894	ENSONIG00000004574	trmt13	99	75.431	Oreochromis_niloticus
ENSSDUG00000015508	trmt13	89	51.121	ENSOANG00000012057	TRMT13	97	51.136	Ornithorhynchus_anatinus
ENSSDUG00000015508	trmt13	97	49.587	ENSOCUG00000023095	TRMT13	95	50.105	Oryctolagus_cuniculus
ENSSDUG00000015508	trmt13	97	65.199	ENSORLG00000003320	trmt13	99	64.706	Oryzias_latipes
ENSSDUG00000015508	trmt13	95	66.738	ENSORLG00020005972	trmt13	98	66.738	Oryzias_latipes_hni
ENSSDUG00000015508	trmt13	97	71.670	ENSORLG00015002270	trmt13	99	71.368	Oryzias_latipes_hsok
ENSSDUG00000015508	trmt13	98	70.526	ENSOMEG00000006724	trmt13	95	70.213	Oryzias_melastigma
ENSSDUG00000015508	trmt13	95	49.686	ENSOGAG00000005618	TRMT13	93	49.790	Otolemur_garnettii
ENSSDUG00000015508	trmt13	97	49.692	ENSOARG00000017983	TRMT13	96	50.000	Ovis_aries
ENSSDUG00000015508	trmt13	99	50.101	ENSPPAG00000043736	TRMT13	99	55.046	Pan_paniscus
ENSSDUG00000015508	trmt13	99	49.091	ENSPPRG00000003424	TRMT13	98	50.000	Panthera_pardus
ENSSDUG00000015508	trmt13	99	49.091	ENSPTIG00000018598	TRMT13	98	50.000	Panthera_tigris_altaica
ENSSDUG00000015508	trmt13	99	50.101	ENSPTRG00000001001	TRMT13	99	55.046	Pan_troglodytes
ENSSDUG00000015508	trmt13	99	50.505	ENSPANG00000007598	TRMT13	98	56.481	Papio_anubis
ENSSDUG00000015508	trmt13	97	55.180	ENSPKIG00000001514	trmt13	98	55.128	Paramormyrops_kingsleyae
ENSSDUG00000015508	trmt13	86	49.423	ENSPSIG00000012703	TRMT13	99	49.423	Pelodiscus_sinensis
ENSSDUG00000015508	trmt13	98	62.316	ENSPMGG00000013298	trmt13	95	62.766	Periophthalmus_magnuspinnatus
ENSSDUG00000015508	trmt13	97	50.103	ENSPEMG00000000275	Trmt13	95	50.630	Peromyscus_maniculatus_bairdii
ENSSDUG00000015508	trmt13	95	47.773	ENSPMAG00000000823	trmt13	99	47.117	Petromyzon_marinus
ENSSDUG00000015508	trmt13	97	50.000	ENSPCIG00000007699	TRMT13	97	50.620	Phascolarctos_cinereus
ENSSDUG00000015508	trmt13	96	65.665	ENSPFOG00000008675	trmt13	95	65.801	Poecilia_formosa
ENSSDUG00000015508	trmt13	96	65.817	ENSPLAG00000009709	trmt13	99	65.672	Poecilia_latipinna
ENSSDUG00000015508	trmt13	96	65.678	ENSPMEG00000022954	trmt13	99	65.672	Poecilia_mexicana
ENSSDUG00000015508	trmt13	78	69.372	ENSPREG00000005645	trmt13	96	64.846	Poecilia_reticulata
ENSSDUG00000015508	trmt13	99	50.101	ENSPPYG00000001120	TRMT13	98	50.412	Pongo_abelii
ENSSDUG00000015508	trmt13	97	50.728	ENSPCAG00000002340	TRMT13	95	50.951	Procavia_capensis
ENSSDUG00000015508	trmt13	97	50.103	ENSPCOG00000017984	TRMT13	95	50.420	Propithecus_coquereli
ENSSDUG00000015508	trmt13	96	50.000	ENSPVAG00000017430	TRMT13	95	50.000	Pteropus_vampyrus
ENSSDUG00000015508	trmt13	97	71.064	ENSPNYG00000013690	trmt13	99	71.552	Pundamilia_nyererei
ENSSDUG00000015508	trmt13	97	55.717	ENSPNAG00000022130	trmt13	99	55.717	Pygocentrus_nattereri
ENSSDUG00000015508	trmt13	97	49.590	ENSRNOG00000015140	Trmt13	93	50.104	Rattus_norvegicus
ENSSDUG00000015508	trmt13	99	50.505	ENSRBIG00000037686	TRMT13	98	56.481	Rhinopithecus_bieti
ENSSDUG00000015508	trmt13	99	50.505	ENSRROG00000044057	TRMT13	98	56.481	Rhinopithecus_roxellana
ENSSDUG00000015508	trmt13	99	50.101	ENSSBOG00000026541	TRMT13	98	55.556	Saimiri_boliviensis_boliviensis
ENSSDUG00000015508	trmt13	90	50.554	ENSSHAG00000005213	TRMT13	94	50.905	Sarcophilus_harrisii
ENSSDUG00000015508	trmt13	97	56.159	ENSSFOG00015017560	trmt13	98	56.540	Scleropages_formosus
ENSSDUG00000015508	trmt13	99	77.386	ENSSMAG00000014592	trmt13	99	77.987	Scophthalmus_maximus
ENSSDUG00000015508	trmt13	99	97.723	ENSSLDG00000019060	trmt13	100	97.723	Seriola_lalandi_dorsalis
ENSSDUG00000015508	trmt13	97	46.263	ENSSARG00000010344	TRMT13	98	46.122	Sorex_araneus
ENSSDUG00000015508	trmt13	96	50.418	ENSSPUG00000016339	TRMT13	98	50.533	Sphenodon_punctatus
ENSSDUG00000015508	trmt13	95	76.344	ENSSPAG00000011922	trmt13	98	76.344	Stegastes_partitus
ENSSDUG00000015508	trmt13	97	50.620	ENSSSCG00000006869	TRMT13	95	50.947	Sus_scrofa
ENSSDUG00000015508	trmt13	95	53.178	ENSTGUG00000005253	TRMT13	98	53.291	Taeniopygia_guttata
ENSSDUG00000015508	trmt13	95	65.684	ENSTRUG00000008400	trmt13	98	65.684	Takifugu_rubripes
ENSSDUG00000015508	trmt13	86	38.407	ENSTBEG00000008911	TRMT13	98	38.517	Tupaia_belangeri
ENSSDUG00000015508	trmt13	97	48.548	ENSUAMG00000017251	TRMT13	95	48.837	Ursus_americanus
ENSSDUG00000015508	trmt13	97	50.725	ENSUMAG00000007901	TRMT13	98	50.794	Ursus_maritimus
ENSSDUG00000015508	trmt13	90	38.803	ENSVPAG00000001034	TRMT13	85	54.839	Vicugna_pacos
ENSSDUG00000015508	trmt13	99	49.102	ENSVVUG00000021996	TRMT13	98	49.593	Vulpes_vulpes
ENSSDUG00000015508	trmt13	96	51.392	ENSXETG00000013204	trmt13	98	50.964	Xenopus_tropicalis
ENSSDUG00000015508	trmt13	96	65.254	ENSXMAG00000010765	trmt13	99	65.106	Xiphophorus_maculatus