EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000015585 (Gene tree)
Gene ID: 111236225
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5773 bases
Position: chrBDQW01000592.1:209432-215204
Accession: 111236225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000021414	RTC	PF01137.21	4.4e-86	1	1
ENSSDUP00000021414	RTC_insert	PF05189.13	3.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000021806	-	1745	XM_022764903	ENSSDUP00000021414	370 (aa)	XP_022620624	UPI000BBE780B

Gene Model

Click here to download ENSSDUG00000015585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015585	rtca	97	71.667	ENSG00000137996	RTCA	98	71.667	Homo_sapiens
ENSSDUG00000015585	rtca	97	92.458	ENSAPOG00000001345	rtca	98	92.458	Acanthochromis_polyacanthus
ENSSDUG00000015585	rtca	72	73.234	ENSAMEG00000008855	RTCA	100	73.234	Ailuropoda_melanoleuca
ENSSDUG00000015585	rtca	98	90.884	ENSACIG00000019643	rtca	98	91.620	Amphilophus_citrinellus
ENSSDUG00000015585	rtca	98	92.265	ENSAOCG00000014979	rtca	98	92.737	Amphiprion_ocellaris
ENSSDUG00000015585	rtca	98	91.989	ENSAPEG00000006945	rtca	98	92.458	Amphiprion_percula
ENSSDUG00000015585	rtca	94	93.410	ENSATEG00000006315	rtca	96	93.410	Anabas_testudineus
ENSSDUG00000015585	rtca	94	66.856	ENSAPLG00000015430	RTCA	100	66.856	Anas_platyrhynchos
ENSSDUG00000015585	rtca	97	71.667	ENSANAG00000025446	RTCA	98	71.667	Aotus_nancymaae
ENSSDUG00000015585	rtca	97	91.111	ENSACLG00000020770	rtca	98	91.341	Astatotilapia_calliptera
ENSSDUG00000015585	rtca	98	80.663	ENSAMXG00000043271	rtca	98	81.285	Astyanax_mexicanus
ENSSDUG00000015585	rtca	97	71.944	ENSBTAG00000006321	RTCA	98	71.944	Bos_taurus
ENSSDUG00000015585	rtca	97	71.944	ENSCJAG00000003398	RTCA	98	71.944	Callithrix_jacchus
ENSSDUG00000015585	rtca	99	70.350	ENSCAFG00000020010	RTCA	67	71.667	Canis_familiaris
ENSSDUG00000015585	rtca	99	70.350	ENSCAFG00020011528	RTCA	56	71.667	Canis_lupus_dingo
ENSSDUG00000015585	rtca	97	71.667	ENSCHIG00000018937	RTCA	98	71.667	Capra_hircus
ENSSDUG00000015585	rtca	97	70.833	ENSTSYG00000011305	RTCA	98	70.833	Carlito_syrichta
ENSSDUG00000015585	rtca	97	71.389	ENSCCAG00000021844	RTCA	97	72.783	Cebus_capucinus
ENSSDUG00000015585	rtca	97	69.437	ENSCATG00000019364	RTCA	100	71.845	Cercocebus_atys
ENSSDUG00000015585	rtca	85	72.785	ENSCLAG00000006125	RTCA	100	72.785	Chinchilla_lanigera
ENSSDUG00000015585	rtca	97	71.667	ENSCSAG00000001509	RTCA	98	71.667	Chlorocebus_sabaeus
ENSSDUG00000015585	rtca	97	70.000	ENSCHOG00000005211	RTCA	98	70.000	Choloepus_hoffmanni
ENSSDUG00000015585	rtca	97	68.245	ENSCPBG00000026658	RTCA	98	68.245	Chrysemys_picta_bellii
ENSSDUG00000015585	rtca	99	55.191	ENSCING00000007875	-	98	55.710	Ciona_intestinalis
ENSSDUG00000015585	rtca	96	55.618	ENSCSAVG00000007269	-	97	55.618	Ciona_savignyi
ENSSDUG00000015585	rtca	97	71.389	ENSCANG00000040106	RTCA	98	71.389	Colobus_angolensis_palliatus
ENSSDUG00000015585	rtca	72	71.004	ENSCGRG00001013163	Rtca	85	71.004	Cricetulus_griseus_chok1gshd
ENSSDUG00000015585	rtca	100	84.409	ENSCSEG00000000530	rtca	96	86.072	Cynoglossus_semilaevis
ENSSDUG00000015585	rtca	98	72.802	ENSCVAG00000021809	rtca	98	73.056	Cyprinodon_variegatus
ENSSDUG00000015585	rtca	98	80.663	ENSDARG00000002215	rtca	98	81.285	Danio_rerio
ENSSDUG00000015585	rtca	97	71.667	ENSDNOG00000000456	RTCA	98	71.667	Dasypus_novemcinctus
ENSSDUG00000015585	rtca	97	70.833	ENSDORG00000005448	Rtca	98	70.833	Dipodomys_ordii
ENSSDUG00000015585	rtca	96	39.045	FBgn0025630	Rtca	97	39.045	Drosophila_melanogaster
ENSSDUG00000015585	rtca	92	52.478	ENSEBUG00000008556	rtca	94	52.478	Eptatretus_burgeri
ENSSDUG00000015585	rtca	97	71.667	ENSEASG00005015926	RTCA	98	71.667	Equus_asinus_asinus
ENSSDUG00000015585	rtca	97	71.667	ENSECAG00000019831	RTCA	98	71.667	Equus_caballus
ENSSDUG00000015585	rtca	88	64.706	ENSEEUG00000001165	RTCA	98	64.706	Erinaceus_europaeus
ENSSDUG00000015585	rtca	97	78.056	ENSELUG00000003741	rtca	98	78.592	Esox_lucius
ENSSDUG00000015585	rtca	97	71.944	ENSFCAG00000024460	RTCA	98	71.944	Felis_catus
ENSSDUG00000015585	rtca	89	69.277	ENSFALG00000002443	RTCA	89	69.277	Ficedula_albicollis
ENSSDUG00000015585	rtca	97	70.833	ENSFDAG00000012070	-	98	70.833	Fukomys_damarensis
ENSSDUG00000015585	rtca	94	58.074	ENSFDAG00000016084	-	97	58.074	Fukomys_damarensis
ENSSDUG00000015585	rtca	69	78.210	ENSFHEG00000002868	rtca	97	84.071	Fundulus_heteroclitus
ENSSDUG00000015585	rtca	97	81.006	ENSGMOG00000013264	rtca	98	81.006	Gadus_morhua
ENSSDUG00000015585	rtca	97	67.967	ENSGALG00000005277	RTCA	98	67.967	Gallus_gallus
ENSSDUG00000015585	rtca	98	90.331	ENSGAFG00000011853	rtca	98	90.782	Gambusia_affinis
ENSSDUG00000015585	rtca	98	88.398	ENSGACG00000013497	rtca	98	89.106	Gasterosteus_aculeatus
ENSSDUG00000015585	rtca	77	68.990	ENSGAGG00000023306	RTCA	98	68.990	Gopherus_agassizii
ENSSDUG00000015585	rtca	97	70.556	ENSGGOG00000044018	-	98	70.556	Gorilla_gorilla
ENSSDUG00000015585	rtca	97	71.111	ENSGGOG00000009546	-	100	70.874	Gorilla_gorilla
ENSSDUG00000015585	rtca	97	90.833	ENSHBUG00000002114	rtca	98	91.061	Haplochromis_burtoni
ENSSDUG00000015585	rtca	97	70.833	ENSHGLG00000002617	RTCA	98	70.833	Heterocephalus_glaber_female
ENSSDUG00000015585	rtca	97	70.833	ENSHGLG00100006056	RTCA	98	70.833	Heterocephalus_glaber_male
ENSSDUG00000015585	rtca	97	76.667	ENSHCOG00000020628	rtca	88	76.816	Hippocampus_comes
ENSSDUG00000015585	rtca	98	79.558	ENSIPUG00000024803	rtca	98	79.888	Ictalurus_punctatus
ENSSDUG00000015585	rtca	97	62.222	ENSSTOG00000033099	-	98	62.222	Ictidomys_tridecemlineatus
ENSSDUG00000015585	rtca	97	66.944	ENSSTOG00000013528	-	93	72.327	Ictidomys_tridecemlineatus
ENSSDUG00000015585	rtca	97	50.696	ENSJJAG00000016178	Rtca	98	50.696	Jaculus_jaculus
ENSSDUG00000015585	rtca	100	88.378	ENSKMAG00000006651	rtca	98	90.223	Kryptolebias_marmoratus
ENSSDUG00000015585	rtca	98	89.751	ENSLBEG00000028971	rtca	99	90.223	Labrus_bergylta
ENSSDUG00000015585	rtca	86	89.342	ENSLBEG00000002448	-	99	89.342	Labrus_bergylta
ENSSDUG00000015585	rtca	97	68.245	ENSLACG00000013666	RTCA	98	68.245	Latimeria_chalumnae
ENSSDUG00000015585	rtca	96	77.746	ENSLOCG00000000093	rtca	97	77.746	Lepisosteus_oculatus
ENSSDUG00000015585	rtca	97	70.278	ENSLAFG00000001473	RTCA	98	70.278	Loxodonta_africana
ENSSDUG00000015585	rtca	97	71.667	ENSMFAG00000034132	RTCA	98	71.667	Macaca_fascicularis
ENSSDUG00000015585	rtca	97	71.667	ENSMMUG00000019105	RTCA	98	71.667	Macaca_mulatta
ENSSDUG00000015585	rtca	83	71.521	ENSMNEG00000037163	RTCA	100	71.521	Macaca_nemestrina
ENSSDUG00000015585	rtca	97	58.889	ENSMLEG00000042151	RTCA	98	58.889	Mandrillus_leucophaeus
ENSSDUG00000015585	rtca	98	94.475	ENSMAMG00000016536	rtca	98	94.972	Mastacembelus_armatus
ENSSDUG00000015585	rtca	97	91.111	ENSMZEG00005017945	rtca	98	91.341	Maylandia_zebra
ENSSDUG00000015585	rtca	86	68.239	ENSMGAG00000006892	RTCA	99	68.239	Meleagris_gallopavo
ENSSDUG00000015585	rtca	97	70.833	ENSMAUG00000008488	Rtca	98	70.833	Mesocricetus_auratus
ENSSDUG00000015585	rtca	83	71.845	ENSMICG00000008643	RTCA	100	71.845	Microcebus_murinus
ENSSDUG00000015585	rtca	97	70.000	ENSMOCG00000016660	Rtca	98	70.000	Microtus_ochrogaster
ENSSDUG00000015585	rtca	83	91.205	ENSMMOG00000007750	rtca	100	91.205	Mola_mola
ENSSDUG00000015585	rtca	96	71.989	ENSMODG00000003557	RTCA	98	71.989	Monodelphis_domestica
ENSSDUG00000015585	rtca	98	92.541	ENSMALG00000020844	rtca	98	93.017	Monopterus_albus
ENSSDUG00000015585	rtca	97	69.167	MGP_CAROLIEiJ_G0025565	Rtca	100	69.718	Mus_caroli
ENSSDUG00000015585	rtca	97	68.889	ENSMUSG00000000339	Rtca	100	69.718	Mus_musculus
ENSSDUG00000015585	rtca	97	69.167	MGP_PahariEiJ_G0027011	Rtca	100	69.718	Mus_pahari
ENSSDUG00000015585	rtca	97	69.444	MGP_SPRETEiJ_G0026515	Rtca	100	70.423	Mus_spretus
ENSSDUG00000015585	rtca	97	71.944	ENSMPUG00000012119	RTCA	98	71.944	Mustela_putorius_furo
ENSSDUG00000015585	rtca	97	68.144	ENSMLUG00000009922	RTCA	98	68.144	Myotis_lucifugus
ENSSDUG00000015585	rtca	97	69.722	ENSNGAG00000011540	Rtca	98	69.722	Nannospalax_galili
ENSSDUG00000015585	rtca	97	90.833	ENSNBRG00000003062	rtca	98	91.061	Neolamprologus_brichardi
ENSSDUG00000015585	rtca	97	71.389	ENSNLEG00000031426	RTCA	98	71.389	Nomascus_leucogenys
ENSSDUG00000015585	rtca	72	68.030	ENSOPRG00000012092	RTCA	71	68.030	Ochotona_princeps
ENSSDUG00000015585	rtca	94	70.977	ENSODEG00000006990	RTCA	96	71.225	Octodon_degus
ENSSDUG00000015585	rtca	97	91.111	ENSONIG00000007753	rtca	98	91.341	Oreochromis_niloticus
ENSSDUG00000015585	rtca	85	71.924	ENSOANG00000012055	RTCA	98	71.924	Ornithorhynchus_anatinus
ENSSDUG00000015585	rtca	97	71.389	ENSOCUG00000014247	RTCA	98	71.389	Oryctolagus_cuniculus
ENSSDUG00000015585	rtca	98	90.055	ENSORLG00000013605	rtca	98	90.782	Oryzias_latipes
ENSSDUG00000015585	rtca	98	90.331	ENSORLG00020001904	rtca	98	91.061	Oryzias_latipes_hni
ENSSDUG00000015585	rtca	98	90.331	ENSORLG00015021064	rtca	98	91.061	Oryzias_latipes_hsok
ENSSDUG00000015585	rtca	98	89.779	ENSOMEG00000000756	rtca	98	90.223	Oryzias_melastigma
ENSSDUG00000015585	rtca	97	65.556	ENSOGAG00000005627	RTCA	98	65.556	Otolemur_garnettii
ENSSDUG00000015585	rtca	85	72.013	ENSOARG00000018122	RTCA	100	72.013	Ovis_aries
ENSSDUG00000015585	rtca	97	68.365	ENSPPAG00000035119	RTCA	100	70.550	Pan_paniscus
ENSSDUG00000015585	rtca	97	72.222	ENSPPRG00000000350	RTCA	98	72.222	Panthera_pardus
ENSSDUG00000015585	rtca	97	71.667	ENSPTIG00000012816	RTCA	98	71.667	Panthera_tigris_altaica
ENSSDUG00000015585	rtca	97	68.365	ENSPTRG00000001004	RTCA	100	70.550	Pan_troglodytes
ENSSDUG00000015585	rtca	97	71.389	ENSPANG00000000346	RTCA	98	71.389	Papio_anubis
ENSSDUG00000015585	rtca	98	82.044	ENSPKIG00000001653	rtca	98	82.682	Paramormyrops_kingsleyae
ENSSDUG00000015585	rtca	97	67.967	ENSPSIG00000011408	RTCA	98	67.967	Pelodiscus_sinensis
ENSSDUG00000015585	rtca	97	70.000	ENSPEMG00000018582	Rtca	98	70.000	Peromyscus_maniculatus_bairdii
ENSSDUG00000015585	rtca	97	55.278	ENSPMAG00000009110	rtca	98	55.278	Petromyzon_marinus
ENSSDUG00000015585	rtca	97	71.667	ENSPCIG00000007684	RTCA	98	71.667	Phascolarctos_cinereus
ENSSDUG00000015585	rtca	98	91.185	ENSPFOG00000004824	rtca	98	91.643	Poecilia_formosa
ENSSDUG00000015585	rtca	98	91.160	ENSPLAG00000011753	rtca	98	91.899	Poecilia_latipinna
ENSSDUG00000015585	rtca	98	91.160	ENSPMEG00000020469	rtca	98	91.899	Poecilia_mexicana
ENSSDUG00000015585	rtca	98	90.884	ENSPREG00000001365	rtca	98	91.341	Poecilia_reticulata
ENSSDUG00000015585	rtca	97	71.667	ENSPPYG00000001115	RTCA	98	71.667	Pongo_abelii
ENSSDUG00000015585	rtca	97	68.333	ENSPCAG00000005076	RTCA	98	68.333	Procavia_capensis
ENSSDUG00000015585	rtca	97	71.944	ENSPCOG00000005603	RTCA	98	71.944	Propithecus_coquereli
ENSSDUG00000015585	rtca	97	67.292	ENSPVAG00000009478	RTCA	98	67.292	Pteropus_vampyrus
ENSSDUG00000015585	rtca	97	91.111	ENSPNYG00000004722	rtca	98	91.341	Pundamilia_nyererei
ENSSDUG00000015585	rtca	98	81.768	ENSPNAG00000022270	rtca	98	82.402	Pygocentrus_nattereri
ENSSDUG00000015585	rtca	97	68.889	ENSRNOG00000014575	Rtca	98	68.889	Rattus_norvegicus
ENSSDUG00000015585	rtca	97	68.633	ENSRBIG00000041180	RTCA	100	70.874	Rhinopithecus_bieti
ENSSDUG00000015585	rtca	97	71.111	ENSRROG00000024929	RTCA	98	71.111	Rhinopithecus_roxellana
ENSSDUG00000015585	rtca	97	71.389	ENSSBOG00000028626	RTCA	98	71.389	Saimiri_boliviensis_boliviensis
ENSSDUG00000015585	rtca	97	71.111	ENSSHAG00000001758	RTCA	98	71.111	Sarcophilus_harrisii
ENSSDUG00000015585	rtca	100	86.757	ENSSMAG00000014680	rtca	100	86.757	Scophthalmus_maximus
ENSSDUG00000015585	rtca	94	99.140	ENSSLDG00000018985	rtca	95	99.140	Seriola_lalandi_dorsalis
ENSSDUG00000015585	rtca	85	66.877	ENSSARG00000013993	RTCA	100	66.877	Sorex_araneus
ENSSDUG00000015585	rtca	98	92.541	ENSSPAG00000011938	rtca	98	93.017	Stegastes_partitus
ENSSDUG00000015585	rtca	97	71.667	ENSSSCG00000006865	RTCA	98	71.667	Sus_scrofa
ENSSDUG00000015585	rtca	97	68.802	ENSTGUG00000005154	RTCA	98	68.802	Taeniopygia_guttata
ENSSDUG00000015585	rtca	98	90.331	ENSTRUG00000008799	rtca	98	90.782	Takifugu_rubripes
ENSSDUG00000015585	rtca	98	87.293	ENSTNIG00000004725	rtca	98	87.709	Tetraodon_nigroviridis
ENSSDUG00000015585	rtca	56	55.769	ENSTBEG00000000943	RTCA	59	55.769	Tupaia_belangeri
ENSSDUG00000015585	rtca	97	69.169	ENSTTRG00000015327	RTCA	98	69.169	Tursiops_truncatus
ENSSDUG00000015585	rtca	92	70.468	ENSUAMG00000017265	RTCA	96	70.468	Ursus_americanus
ENSSDUG00000015585	rtca	97	71.667	ENSUMAG00000007881	RTCA	98	71.667	Ursus_maritimus
ENSSDUG00000015585	rtca	85	63.722	ENSVPAG00000001039	RTCA	84	63.722	Vicugna_pacos
ENSSDUG00000015585	rtca	99	70.620	ENSVVUG00000022041	RTCA	66	71.667	Vulpes_vulpes
ENSSDUG00000015585	rtca	96	58.287	ENSXETG00000031661	RTCA	98	58.287	Xenopus_tropicalis
ENSSDUG00000015585	rtca	98	78.729	ENSXCOG00000008002	rtca	98	79.050	Xiphophorus_couchianus
ENSSDUG00000015585	rtca	98	90.608	ENSXMAG00000005482	rtca	98	91.061	Xiphophorus_maculatus