EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000015676 (Gene tree)
Gene ID: 111238031
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5726 bases
Position: chrBDQW01001186.1:86017-91742
Accession: 111238031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000021540	Ribosomal_S18	PF01084.20	6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000021934	-	4947	XM_022767406	ENSSDUP00000021540	128 (aa)	XP_022623127	UPI000BBF3A04

Gene Model

Click here to download ENSSDUG00000015676's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015676	mrps18c	100	71.318	ENSAPOG00000019045	mrps18c	100	71.318	Acanthochromis_polyacanthus
ENSSDUG00000015676	mrps18c	72	78.261	ENSACIG00000020253	mrps18c	91	78.261	Amphilophus_citrinellus
ENSSDUG00000015676	mrps18c	100	70.000	ENSAOCG00000014338	mrps18c	100	70.000	Amphiprion_ocellaris
ENSSDUG00000015676	mrps18c	100	70.000	ENSAPEG00000022956	mrps18c	100	70.000	Amphiprion_percula
ENSSDUG00000015676	mrps18c	68	85.057	ENSAPEG00000023068	-	87	81.522	Amphiprion_percula
ENSSDUG00000015676	mrps18c	100	77.692	ENSATEG00000023417	mrps18c	100	77.692	Anabas_testudineus
ENSSDUG00000015676	mrps18c	70	67.416	ENSAPLG00000012544	-	86	67.416	Anas_platyrhynchos
ENSSDUG00000015676	mrps18c	72	86.957	ENSACLG00000010521	mrps18c	90	86.957	Astatotilapia_calliptera
ENSSDUG00000015676	mrps18c	71	76.923	ENSAMXG00000012238	mrps18c	92	76.923	Astyanax_mexicanus
ENSSDUG00000015676	mrps18c	95	59.016	ENSCPBG00000007783	-	72	59.016	Chrysemys_picta_bellii
ENSSDUG00000015676	mrps18c	73	80.851	ENSCSEG00000000711	mrps18c	67	80.851	Cynoglossus_semilaevis
ENSSDUG00000015676	mrps18c	100	66.406	ENSCVAG00000020169	mrps18c	100	66.406	Cyprinodon_variegatus
ENSSDUG00000015676	mrps18c	98	64.122	ENSDARG00000069624	mrps18c	95	64.122	Danio_rerio
ENSSDUG00000015676	mrps18c	100	63.910	ENSELUG00000024603	mrps18c	100	63.910	Esox_lucius
ENSSDUG00000015676	mrps18c	100	71.094	ENSFHEG00000015550	mrps18c	95	71.094	Fundulus_heteroclitus
ENSSDUG00000015676	mrps18c	100	71.094	ENSFHEG00000018752	-	100	71.094	Fundulus_heteroclitus
ENSSDUG00000015676	mrps18c	73	63.441	ENSGALG00000023191	MRPS18C	65	63.441	Gallus_gallus
ENSSDUG00000015676	mrps18c	100	66.406	ENSGAFG00000008048	mrps18c	83	66.406	Gambusia_affinis
ENSSDUG00000015676	mrps18c	89	61.404	ENSGAGG00000015144	-	77	61.404	Gopherus_agassizii
ENSSDUG00000015676	mrps18c	100	73.077	ENSHBUG00000002008	mrps18c	100	73.077	Haplochromis_burtoni
ENSSDUG00000015676	mrps18c	85	74.312	ENSHCOG00000013161	mrps18c	83	74.312	Hippocampus_comes
ENSSDUG00000015676	mrps18c	71	76.923	ENSIPUG00000003783	mrps18c	88	76.923	Ictalurus_punctatus
ENSSDUG00000015676	mrps18c	100	72.656	ENSKMAG00000016467	mrps18c	100	72.656	Kryptolebias_marmoratus
ENSSDUG00000015676	mrps18c	100	76.923	ENSLBEG00000019174	mrps18c	100	76.923	Labrus_bergylta
ENSSDUG00000015676	mrps18c	100	76.923	ENSLBEG00000021861	mrps18c	100	76.923	Labrus_bergylta
ENSSDUG00000015676	mrps18c	98	57.812	ENSLACG00000011243	mrps18c	100	57.812	Latimeria_chalumnae
ENSSDUG00000015676	mrps18c	89	64.957	ENSLOCG00000012115	mrps18c	87	64.957	Lepisosteus_oculatus
ENSSDUG00000015676	mrps18c	100	71.642	ENSMAMG00000012386	mrps18c	100	71.642	Mastacembelus_armatus
ENSSDUG00000015676	mrps18c	100	73.077	ENSMZEG00005023278	mrps18c	100	73.077	Maylandia_zebra
ENSSDUG00000015676	mrps18c	73	87.097	ENSMMOG00000011316	mrps18c	71	87.097	Mola_mola
ENSSDUG00000015676	mrps18c	100	73.077	ENSNBRG00000006182	mrps18c	100	73.077	Neolamprologus_brichardi
ENSSDUG00000015676	mrps18c	70	68.539	ENSMEUG00000010972	-	70	68.539	Notamacropus_eugenii
ENSSDUG00000015676	mrps18c	100	73.846	ENSONIG00000012527	mrps18c	91	86.957	Oreochromis_niloticus
ENSSDUG00000015676	mrps18c	100	67.442	ENSORLG00015006869	mrps18c	100	67.442	Oryzias_latipes_hsok
ENSSDUG00000015676	mrps18c	70	74.157	ENSOMEG00000005009	mrps18c	86	74.157	Oryzias_melastigma
ENSSDUG00000015676	mrps18c	100	57.664	ENSPKIG00000021736	mrps18c	100	57.664	Paramormyrops_kingsleyae
ENSSDUG00000015676	mrps18c	71	83.516	ENSPMGG00000002991	mrps18c	92	83.516	Periophthalmus_magnuspinnatus
ENSSDUG00000015676	mrps18c	100	67.188	ENSPFOG00000002351	mrps18c	83	67.188	Poecilia_formosa
ENSSDUG00000015676	mrps18c	100	67.188	ENSPLAG00000015187	mrps18c	100	67.188	Poecilia_latipinna
ENSSDUG00000015676	mrps18c	100	66.406	ENSPMEG00000014488	mrps18c	83	66.406	Poecilia_mexicana
ENSSDUG00000015676	mrps18c	65	77.108	ENSPREG00000012593	mrps18c	85	77.108	Poecilia_reticulata
ENSSDUG00000015676	mrps18c	100	72.308	ENSPNYG00000010654	mrps18c	100	72.308	Pundamilia_nyererei
ENSSDUG00000015676	mrps18c	71	78.022	ENSPNAG00000009350	mrps18c	85	78.022	Pygocentrus_nattereri
ENSSDUG00000015676	mrps18c	100	61.765	ENSSFOG00015019444	mrps18c	100	61.765	Scleropages_formosus
ENSSDUG00000015676	mrps18c	86	86.667	ENSSLDG00000002034	mrps18c	93	86.667	Seriola_lalandi_dorsalis
ENSSDUG00000015676	mrps18c	74	63.158	ENSSPUG00000013990	-	69	63.158	Sphenodon_punctatus
ENSSDUG00000015676	mrps18c	99	67.188	ENSSPAG00000008687	mrps18c	99	67.188	Stegastes_partitus
ENSSDUG00000015676	mrps18c	100	72.308	ENSTRUG00000024403	mrps18c	100	72.308	Takifugu_rubripes
ENSSDUG00000015676	mrps18c	100	76.154	ENSTNIG00000005674	mrps18c	100	76.154	Tetraodon_nigroviridis
ENSSDUG00000015676	mrps18c	93	54.264	ENSXETG00000027597	mrps18c	98	54.264	Xenopus_tropicalis
ENSSDUG00000015676	mrps18c	100	61.719	ENSXCOG00000016208	mrps18c	89	77.528	Xiphophorus_couchianus
ENSSDUG00000015676	mrps18c	100	67.188	ENSXMAG00000012555	mrps18c	83	67.188	Xiphophorus_maculatus