EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000015823 (Gene tree)
Gene ID
111217350
Gene Symbol
YTHDF1 (1 of many)
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
8833 bases
Position
chrBDQW01000043.1:3119296-3128128
Accession
111217350
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000021766YTHPF04146.155.3e-4111
ENSSDUP00000021748YTHPF04146.155.9e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000022166YTHDF1 (1 of many)-2021659-ENSSDUP00000021766552 (aa)--
ENSSDUT00000022150YTHDF1 (1 of many)-2014996XM_022739175ENSSDUP00000021748634 (aa)XP_022594896UPI000BBEF1E4
Gene Model
Click here to download ENSSDUG00000015823's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015823's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000015823YTHDF19481.502ENSSDUG00000000435ythdf19482.418
ENSSDUG00000015823YTHDF19960.239ENSSDUG00000016335ythdf29561.250
ENSSDUG00000015823YTHDF19863.071ENSSDUG00000014403ythdf39876.016
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000015823YTHDF19975.352ENSG00000149658YTHDF19975.088Homo_sapiens
ENSSDUG00000015823YTHDF19975.894ENSAPOG00000004358ythdf19382.505Acanthochromis_polyacanthus
ENSSDUG00000015823YTHDF110095.110ENSAPOG00000010796YTHDF110095.110Acanthochromis_polyacanthus
ENSSDUG00000015823YTHDF19974.427ENSAMEG00000017323YTHDF19875.923Ailuropoda_melanoleuca
ENSSDUG00000015823YTHDF19792.153ENSACIG00000020083YTHDF19792.701Amphilophus_citrinellus
ENSSDUG00000015823YTHDF19381.203ENSACIG00000011264ythdf19582.800Amphilophus_citrinellus
ENSSDUG00000015823YTHDF19382.674ENSAOCG00000022251ythdf19583.647Amphiprion_ocellaris
ENSSDUG00000015823YTHDF110095.110ENSAOCG00000012567YTHDF110095.110Amphiprion_ocellaris
ENSSDUG00000015823YTHDF110095.268ENSAPEG00000008750YTHDF110095.268Amphiprion_percula
ENSSDUG00000015823YTHDF19976.012ENSAPEG00000021878ythdf19975.938Amphiprion_percula
ENSSDUG00000015823YTHDF110094.322ENSATEG00000005996YTHDF110094.322Anabas_testudineus
ENSSDUG00000015823YTHDF19480.591ENSATEG00000023840ythdf19682.070Anabas_testudineus
ENSSDUG00000015823YTHDF19976.232ENSAPLG00000005985YTHDF19976.789Anas_platyrhynchos
ENSSDUG00000015823YTHDF19976.667ENSACAG00000005560YTHDF19977.758Anolis_carolinensis
ENSSDUG00000015823YTHDF19962.295ENSANAG00000021022-9862.724Aotus_nancymaae
ENSSDUG00000015823YTHDF19974.472ENSANAG00000034786-10074.383Aotus_nancymaae
ENSSDUG00000015823YTHDF110091.956ENSACLG00000025518YTHDF110092.114Astatotilapia_calliptera
ENSSDUG00000015823YTHDF19974.472ENSBTAG00000010383YTHDF110073.954Bos_taurus
ENSSDUG00000015823YTHDF19974.296ENSCJAG00000010056YTHDF19974.737Callithrix_jacchus
ENSSDUG00000015823YTHDF19173.905ENSCAFG00000012772YTHDF19974.809Canis_familiaris
ENSSDUG00000015823YTHDF19173.905ENSCAFG00020001214YTHDF19974.809Canis_lupus_dingo
ENSSDUG00000015823YTHDF19973.592ENSCHIG00000026494YTHDF19973.989Capra_hircus
ENSSDUG00000015823YTHDF19973.451ENSTSYG00000033436YTHDF19974.648Carlito_syrichta
ENSSDUG00000015823YTHDF19772.809ENSCAPG00000002544YTHDF19472.487Cavia_aperea
ENSSDUG00000015823YTHDF19973.852ENSCPOG00000010202YTHDF19973.951Cavia_porcellus
ENSSDUG00000015823YTHDF19973.415ENSCCAG00000024650YTHDF19974.737Cebus_capucinus
ENSSDUG00000015823YTHDF19975.309ENSCATG00000033272YTHDF19975.309Cercocebus_atys
ENSSDUG00000015823YTHDF19973.944ENSCLAG00000005989YTHDF19974.472Chinchilla_lanigera
ENSSDUG00000015823YTHDF19975.309ENSCSAG00000016266YTHDF19975.309Chlorocebus_sabaeus
ENSSDUG00000015823YTHDF19976.801ENSCPBG00000027183YTHDF19976.883Chrysemys_picta_bellii
ENSSDUG00000015823YTHDF19975.485ENSCANG00000029082YTHDF19875.485Colobus_angolensis_palliatus
ENSSDUG00000015823YTHDF19974.956ENSCGRG00001016568Ythdf19976.274Cricetulus_griseus_chok1gshd
ENSSDUG00000015823YTHDF19974.912ENSCGRG00000009207Ythdf110076.232Cricetulus_griseus_crigri
ENSSDUG00000015823YTHDF19481.076ENSCSEG00000020623YTHDF19581.633Cynoglossus_semilaevis
ENSSDUG00000015823YTHDF19894.280ENSCVAG00000014378YTHDF19994.280Cyprinodon_variegatus
ENSSDUG00000015823YTHDF19580.112ENSCVAG00000017940ythdf19480.835Cyprinodon_variegatus
ENSSDUG00000015823YTHDF15089.964ENSDARG00000016447ythdf19380.522Danio_rerio
ENSSDUG00000015823YTHDF19975.132ENSDNOG00000043590YTHDF19975.880Dasypus_novemcinctus
ENSSDUG00000015823YTHDF19773.166ENSDORG00000002879Ythdf19473.882Dipodomys_ordii
ENSSDUG00000015823YTHDF19555.516ENSETEG00000017860-9859.664Echinops_telfairi
ENSSDUG00000015823YTHDF19974.126ENSEASG00005023186YTHDF19975.923Equus_asinus_asinus
ENSSDUG00000015823YTHDF19773.535ENSECAG00000019475YTHDF110075.712Equus_caballus
ENSSDUG00000015823YTHDF19274.765ENSEEUG00000007461YTHDF110075.797Erinaceus_europaeus
ENSSDUG00000015823YTHDF19978.689ENSELUG00000022768ythdf19781.100Esox_lucius
ENSSDUG00000015823YTHDF19978.636ENSELUG00000001906YTHDF19984.015Esox_lucius
ENSSDUG00000015823YTHDF19974.250ENSFCAG00000008917YTHDF19975.661Felis_catus
ENSSDUG00000015823YTHDF19977.385ENSFALG00000010463YTHDF19977.018Ficedula_albicollis
ENSSDUG00000015823YTHDF19973.451ENSFDAG00000019602YTHDF19974.159Fukomys_damarensis
ENSSDUG00000015823YTHDF110091.009ENSFHEG00000002540YTHDF19994.198Fundulus_heteroclitus
ENSSDUG00000015823YTHDF19680.295ENSFHEG00000023218ythdf19581.356Fundulus_heteroclitus
ENSSDUG00000015823YTHDF18495.312ENSGMOG00000019610ythdf18390.187Gadus_morhua
ENSSDUG00000015823YTHDF19976.056ENSGALG00000005745YTHDF110076.271Gallus_gallus
ENSSDUG00000015823YTHDF110092.271ENSGAFG00000021100YTHDF19895.588Gambusia_affinis
ENSSDUG00000015823YTHDF19985.420ENSGACG00000002613YTHDF19986.792Gasterosteus_aculeatus
ENSSDUG00000015823YTHDF19974.491ENSGACG00000012014ythdf19974.022Gasterosteus_aculeatus
ENSSDUG00000015823YTHDF19976.977ENSGAGG00000003007YTHDF19977.208Gopherus_agassizii
ENSSDUG00000015823YTHDF19975.704ENSGGOG00000008340YTHDF19975.439Gorilla_gorilla
ENSSDUG00000015823YTHDF110092.429ENSHBUG00000004875YTHDF110092.587Haplochromis_burtoni
ENSSDUG00000015823YTHDF19975.507ENSHBUG00000011284ythdf19579.032Haplochromis_burtoni
ENSSDUG00000015823YTHDF19973.628ENSHGLG00000006585YTHDF19974.867Heterocephalus_glaber_female
ENSSDUG00000015823YTHDF19973.628ENSHGLG00100004683YTHDF19974.867Heterocephalus_glaber_male
ENSSDUG00000015823YTHDF19775.685ENSHCOG00000008866ythdf19973.802Hippocampus_comes
ENSSDUG00000015823YTHDF110086.593ENSHCOG00000011303YTHDF110089.773Hippocampus_comes
ENSSDUG00000015823YTHDF19783.091ENSIPUG00000000425Ythdf19289.015Ictalurus_punctatus
ENSSDUG00000015823YTHDF19973.675ENSSTOG00000023001YTHDF19975.352Ictidomys_tridecemlineatus
ENSSDUG00000015823YTHDF19975.221ENSJJAG00000013589Ythdf110076.367Jaculus_jaculus
ENSSDUG00000015823YTHDF19481.308ENSKMAG00000005595ythdf19583.103Kryptolebias_marmoratus
ENSSDUG00000015823YTHDF110091.640ENSKMAG00000017472YTHDF19993.578Kryptolebias_marmoratus
ENSSDUG00000015823YTHDF19975.234ENSLBEG00000014105ythdf19975.862Labrus_bergylta
ENSSDUG00000015823YTHDF110091.009ENSLBEG00000012068YTHDF110091.325Labrus_bergylta
ENSSDUG00000015823YTHDF19674.460ENSLACG00000014195YTHDF19575.229Latimeria_chalumnae
ENSSDUG00000015823YTHDF110076.766ENSLOCG00000005020ythdf110075.663Lepisosteus_oculatus
ENSSDUG00000015823YTHDF19975.395ENSLAFG00000008884YTHDF19975.395Loxodonta_africana
ENSSDUG00000015823YTHDF19975.309ENSMFAG00000042868YTHDF19975.309Macaca_fascicularis
ENSSDUG00000015823YTHDF19975.309ENSMMUG00000009227YTHDF19975.309Macaca_mulatta
ENSSDUG00000015823YTHDF19975.309ENSMNEG00000030851YTHDF19975.309Macaca_nemestrina
ENSSDUG00000015823YTHDF19975.265ENSMLEG00000009252YTHDF110075.265Mandrillus_leucophaeus
ENSSDUG00000015823YTHDF19973.333ENSMAMG00000024255ythdf19478.957Mastacembelus_armatus
ENSSDUG00000015823YTHDF110094.164ENSMAMG00000011072YTHDF110094.164Mastacembelus_armatus
ENSSDUG00000015823YTHDF19975.701ENSMZEG00005026397ythdf19579.928Maylandia_zebra
ENSSDUG00000015823YTHDF110092.429ENSMZEG00005023596YTHDF110092.587Maylandia_zebra
ENSSDUG00000015823YTHDF19976.056ENSMGAG00000006139YTHDF19976.614Meleagris_gallopavo
ENSSDUG00000015823YTHDF19975.088ENSMAUG00000017660Ythdf19976.408Mesocricetus_auratus
ENSSDUG00000015823YTHDF19974.386ENSMICG00000032266YTHDF19975.524Microcebus_murinus
ENSSDUG00000015823YTHDF19974.912ENSMOCG00000013573Ythdf19976.408Microtus_ochrogaster
ENSSDUG00000015823YTHDF19988.310ENSMMOG00000020467YTHDF19988.942Mola_mola
ENSSDUG00000015823YTHDF19376.573ENSMMOG00000017500ythdf19376.265Mola_mola
ENSSDUG00000015823YTHDF19174.528ENSMODG00000016842YTHDF110076.046Monodelphis_domestica
ENSSDUG00000015823YTHDF110089.780ENSMALG00000022209YTHDF19991.450Monopterus_albus
ENSSDUG00000015823YTHDF19380.627ENSMALG00000015672ythdf19380.256Monopterus_albus
ENSSDUG00000015823YTHDF19974.780MGP_CAROLIEiJ_G0024790Ythdf19975.528Mus_caroli
ENSSDUG00000015823YTHDF19974.780ENSMUSG00000038848Ythdf19975.528Mus_musculus
ENSSDUG00000015823YTHDF19974.780MGP_PahariEiJ_G0026237Ythdf19975.528Mus_pahari
ENSSDUG00000015823YTHDF19974.780MGP_SPRETEiJ_G0025715Ythdf19975.528Mus_spretus
ENSSDUG00000015823YTHDF19170.189ENSMPUG00000008111YTHDF110073.524Mustela_putorius_furo
ENSSDUG00000015823YTHDF19875.575ENSMLUG00000002241YTHDF19774.911Myotis_lucifugus
ENSSDUG00000015823YTHDF19974.735ENSNGAG00000000334Ythdf19975.880Nannospalax_galili
ENSSDUG00000015823YTHDF19793.284ENSNBRG00000015321YTHDF19992.647Neolamprologus_brichardi
ENSSDUG00000015823YTHDF19780.000ENSNBRG00000008213ythdf19583.391Neolamprologus_brichardi
ENSSDUG00000015823YTHDF19569.963ENSOPRG00000001758-9978.838Ochotona_princeps
ENSSDUG00000015823YTHDF19973.721ENSODEG00000004380-9974.603Octodon_degus
ENSSDUG00000015823YTHDF19961.646ENSODEG00000000074-9861.821Octodon_degus
ENSSDUG00000015823YTHDF19378.253ENSONIG00000016799ythdf19975.318Oreochromis_niloticus
ENSSDUG00000015823YTHDF19976.140ENSOANG00000003723YTHDF19977.098Ornithorhynchus_anatinus
ENSSDUG00000015823YTHDF17385.946ENSOCUG00000012780YTHDF19870.991Oryctolagus_cuniculus
ENSSDUG00000015823YTHDF110088.959ENSORLG00000009739YTHDF110088.959Oryzias_latipes
ENSSDUG00000015823YTHDF19973.832ENSORLG00000014665YTHDF19972.868Oryzias_latipes
ENSSDUG00000015823YTHDF19974.259ENSORLG00020000307ythdf19973.292Oryzias_latipes_hni
ENSSDUG00000015823YTHDF110088.486ENSORLG00020001332YTHDF110088.486Oryzias_latipes_hni
ENSSDUG00000015823YTHDF19974.103ENSORLG00015006302ythdf19973.137Oryzias_latipes_hsok
ENSSDUG00000015823YTHDF110088.644ENSORLG00015018321YTHDF110088.644Oryzias_latipes_hsok
ENSSDUG00000015823YTHDF110088.959ENSOMEG00000011843YTHDF110088.644Oryzias_melastigma
ENSSDUG00000015823YTHDF19974.531ENSOMEG00000002941YTHDF19579.664Oryzias_melastigma
ENSSDUG00000015823YTHDF19973.369ENSOGAG00000000480YTHDF19974.603Otolemur_garnettii
ENSSDUG00000015823YTHDF19973.455ENSOARG00000011639YTHDF19872.842Ovis_aries
ENSSDUG00000015823YTHDF19975.704ENSPPAG00000023277YTHDF110075.439Pan_paniscus
ENSSDUG00000015823YTHDF19974.956ENSPPRG00000020805YTHDF19976.190Panthera_pardus
ENSSDUG00000015823YTHDF19973.675ENSPTIG00000017355YTHDF19779.134Panthera_tigris_altaica
ENSSDUG00000015823YTHDF19975.704ENSPTRG00000013730YTHDF19975.439Pan_troglodytes
ENSSDUG00000015823YTHDF19975.309ENSPANG00000021472YTHDF19975.309Papio_anubis
ENSSDUG00000015823YTHDF19774.910ENSPKIG00000005427ythdf19776.354Paramormyrops_kingsleyae
ENSSDUG00000015823YTHDF19776.114ENSPKIG00000005026YTHDF19675.956Paramormyrops_kingsleyae
ENSSDUG00000015823YTHDF19776.292ENSPSIG00000005529YTHDF19576.182Pelodiscus_sinensis
ENSSDUG00000015823YTHDF19378.442ENSPMGG00000015328ythdf19579.167Periophthalmus_magnuspinnatus
ENSSDUG00000015823YTHDF19885.763ENSPMGG00000009101YTHDF19986.106Periophthalmus_magnuspinnatus
ENSSDUG00000015823YTHDF19975.221ENSPEMG00000020199Ythdf110076.543Peromyscus_maniculatus_bairdii
ENSSDUG00000015823YTHDF19775.492ENSPCIG00000017170YTHDF110076.426Phascolarctos_cinereus
ENSSDUG00000015823YTHDF19876.976ENSPFOG00000005405ythdf19974.138Poecilia_formosa
ENSSDUG00000015823YTHDF19680.769ENSPLAG00000006653ythdf19583.793Poecilia_latipinna
ENSSDUG00000015823YTHDF110092.429ENSPLAG00000006298YTHDF110092.271Poecilia_latipinna
ENSSDUG00000015823YTHDF110092.429ENSPMEG00000020969-10093.706Poecilia_mexicana
ENSSDUG00000015823YTHDF19678.976ENSPMEG00000023753ythdf19580.748Poecilia_mexicana
ENSSDUG00000015823YTHDF19792.220ENSPREG00000017662YTHDF19892.220Poecilia_reticulata
ENSSDUG00000015823YTHDF19680.220ENSPREG00000002173ythdf19581.273Poecilia_reticulata
ENSSDUG00000015823YTHDF19971.115ENSPPYG00000011226YTHDF110081.858Pongo_abelii
ENSSDUG00000015823YTHDF18971.429ENSPCAG00000002452YTHDF19872.407Procavia_capensis
ENSSDUG00000015823YTHDF19974.074ENSPCOG00000025969YTHDF19975.220Propithecus_coquereli
ENSSDUG00000015823YTHDF19770.036ENSPVAG00000017568YTHDF19671.165Pteropus_vampyrus
ENSSDUG00000015823YTHDF110092.429ENSPNYG00000002266YTHDF110092.587Pundamilia_nyererei
ENSSDUG00000015823YTHDF19975.507ENSPNYG00000014007ythdf19579.928Pundamilia_nyererei
ENSSDUG00000015823YTHDF19977.723ENSPNAG00000012447ythdf19883.394Pygocentrus_nattereri
ENSSDUG00000015823YTHDF19974.205ENSRNOG00000027015Ythdf19975.528Rattus_norvegicus
ENSSDUG00000015823YTHDF19974.205ENSRBIG00000044959YTHDF19974.427Rhinopithecus_bieti
ENSSDUG00000015823YTHDF19974.205ENSRROG00000033014YTHDF19974.427Rhinopithecus_roxellana
ENSSDUG00000015823YTHDF19772.987ENSSBOG00000027278YTHDF110073.106Saimiri_boliviensis_boliviensis
ENSSDUG00000015823YTHDF19975.442ENSSHAG00000010430YTHDF18876.408Sarcophilus_harrisii
ENSSDUG00000015823YTHDF19977.336ENSSFOG00015000284ythdf110075.748Scleropages_formosus
ENSSDUG00000015823YTHDF16591.720ENSSMAG00000013715ythdf19086.111Scophthalmus_maximus
ENSSDUG00000015823YTHDF19987.635ENSSMAG00000007635YTHDF110088.532Scophthalmus_maximus
ENSSDUG00000015823YTHDF110099.054ENSSLDG00000001054YTHDF110099.054Seriola_lalandi_dorsalis
ENSSDUG00000015823YTHDF19976.526ENSSLDG00000024948ythdf19478.313Seriola_lalandi_dorsalis
ENSSDUG00000015823YTHDF19175.285ENSSPUG00000015143YTHDF110075.758Sphenodon_punctatus
ENSSDUG00000015823YTHDF110094.479ENSSPAG00000003666YTHDF110094.479Stegastes_partitus
ENSSDUG00000015823YTHDF19975.781ENSSPAG00000014989ythdf19477.226Stegastes_partitus
ENSSDUG00000015823YTHDF19973.016ENSSSCG00000040086YTHDF19972.174Sus_scrofa
ENSSDUG00000015823YTHDF19976.232ENSTGUG00000007565YTHDF110076.789Taeniopygia_guttata
ENSSDUG00000015823YTHDF19488.000ENSTRUG00000005049YTHDF19988.961Takifugu_rubripes
ENSSDUG00000015823YTHDF19876.531ENSTRUG00000004288ythdf19976.290Takifugu_rubripes
ENSSDUG00000015823YTHDF19986.751ENSTNIG00000003975YTHDF19987.013Tetraodon_nigroviridis
ENSSDUG00000015823YTHDF19976.991ENSTNIG00000012490ythdf19577.106Tetraodon_nigroviridis
ENSSDUG00000015823YTHDF19672.545ENSTTRG00000001804YTHDF19474.115Tursiops_truncatus
ENSSDUG00000015823YTHDF19774.955ENSUAMG00000011021YTHDF110075.522Ursus_americanus
ENSSDUG00000015823YTHDF19174.144ENSUMAG00000022290YTHDF110075.568Ursus_maritimus
ENSSDUG00000015823YTHDF19173.473ENSVVUG00000015275YTHDF19975.000Vulpes_vulpes
ENSSDUG00000015823YTHDF19775.887ENSXETG00000027086ythdf19576.036Xenopus_tropicalis
ENSSDUG00000015823YTHDF19891.613ENSXCOG00000008115YTHDF19991.613Xiphophorus_couchianus
ENSSDUG00000015823YTHDF19679.853ENSXCOG00000002490ythdf19280.899Xiphophorus_couchianus
ENSSDUG00000015823YTHDF19680.439ENSXMAG00000008525ythdf19480.935Xiphophorus_maculatus
ENSSDUG00000015823YTHDF110092.114ENSXMAG00000015644YTHDF19993.394Xiphophorus_maculatus

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