EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000015866 (Gene tree)
Gene ID: 111220520
Gene Symbol: dcp1a
Alias: SMIF|mitc1
Full Name: decapping mRNA 1A
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 26958 bases
Position: chrBDQW01000070.1:242531-269488
Accession: 111220520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000021804	DCP1	PF06058.13	5.8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022205	-	5457	XM_022743598	ENSSDUP00000021804	495 (aa)	XP_022599319	UPI000BBEC12B

Gene Model

Click here to download ENSSDUG00000015866's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015866	dcp1a	99	37.158	ENSG00000272886	DCP1A	92	73.404	Homo_sapiens
ENSSDUG00000015866	dcp1a	99	39.108	ENSAMEG00000007875	DCP1A	99	38.765	Ailuropoda_melanoleuca
ENSSDUG00000015866	dcp1a	100	79.684	ENSAOCG00000021194	dcp1a	100	79.684	Amphiprion_ocellaris
ENSSDUG00000015866	dcp1a	100	80.079	ENSAPEG00000012770	dcp1a	100	80.079	Amphiprion_percula
ENSSDUG00000015866	dcp1a	100	80.632	ENSATEG00000010513	dcp1a	100	80.632	Anabas_testudineus
ENSSDUG00000015866	dcp1a	74	54.825	ENSAPLG00000014921	DCP1A	66	54.825	Anas_platyrhynchos
ENSSDUG00000015866	dcp1a	73	57.642	ENSACAG00000011028	DCP1A	64	57.642	Anolis_carolinensis
ENSSDUG00000015866	dcp1a	100	77.362	ENSACLG00000020963	dcp1a	97	77.165	Astatotilapia_calliptera
ENSSDUG00000015866	dcp1a	100	53.065	ENSAMXG00000014974	dcp1a	100	53.089	Astyanax_mexicanus
ENSSDUG00000015866	dcp1a	99	38.007	ENSCJAG00000007337	DCP1A	52	44.904	Callithrix_jacchus
ENSSDUG00000015866	dcp1a	99	38.660	ENSCAFG00000008637	DCP1A	99	38.660	Canis_familiaris
ENSSDUG00000015866	dcp1a	99	38.660	ENSCAFG00020004562	DCP1A	97	38.488	Canis_lupus_dingo
ENSSDUG00000015866	dcp1a	73	52.800	ENSCHIG00000023880	DCP1A	68	55.652	Capra_hircus
ENSSDUG00000015866	dcp1a	93	44.817	ENSTSYG00000000596	DCP1A	79	46.465	Carlito_syrichta
ENSSDUG00000015866	dcp1a	99	37.438	ENSCPOG00000000073	DCP1A	81	46.505	Cavia_porcellus
ENSSDUG00000015866	dcp1a	99	38.682	ENSCCAG00000035664	DCP1A	75	46.875	Cebus_capucinus
ENSSDUG00000015866	dcp1a	99	38.230	ENSCATG00000044027	DCP1A	58	46.154	Cercocebus_atys
ENSSDUG00000015866	dcp1a	99	38.071	ENSCLAG00000006913	DCP1A	81	47.352	Chinchilla_lanigera
ENSSDUG00000015866	dcp1a	91	33.088	ENSCHOG00000006436	DCP1A	100	33.088	Choloepus_hoffmanni
ENSSDUG00000015866	dcp1a	99	38.356	ENSCGRG00001023753	Dcp1a	81	47.500	Cricetulus_griseus_chok1gshd
ENSSDUG00000015866	dcp1a	99	38.356	ENSCGRG00000005738	Dcp1a	81	47.500	Cricetulus_griseus_crigri
ENSSDUG00000015866	dcp1a	100	68.824	ENSCVAG00000001779	dcp1a	100	68.824	Cyprinodon_variegatus
ENSSDUG00000015866	dcp1a	100	50.688	ENSDARG00000100136	dcp1a	85	74.449	Danio_rerio
ENSSDUG00000015866	dcp1a	100	38.276	ENSDNOG00000036524	DCP1A	75	46.894	Dasypus_novemcinctus
ENSSDUG00000015866	dcp1a	60	47.619	ENSDORG00000001396	Dcp1a	52	47.619	Dipodomys_ordii
ENSSDUG00000015866	dcp1a	62	55.556	ENSETEG00000001601	DCP1A	55	55.556	Echinops_telfairi
ENSSDUG00000015866	dcp1a	99	39.078	ENSEASG00005014966	DCP1A	99	38.370	Equus_asinus_asinus
ENSSDUG00000015866	dcp1a	99	39.078	ENSECAG00000024754	DCP1A	99	38.200	Equus_caballus
ENSSDUG00000015866	dcp1a	100	59.444	ENSELUG00000013077	dcp1a	100	59.032	Esox_lucius
ENSSDUG00000015866	dcp1a	88	45.152	ENSFCAG00000003903	DCP1A	75	47.188	Felis_catus
ENSSDUG00000015866	dcp1a	76	41.365	ENSFALG00000008704	DCP1A	75	41.365	Ficedula_albicollis
ENSSDUG00000015866	dcp1a	99	38.462	ENSFDAG00000005588	DCP1A	81	47.040	Fukomys_damarensis
ENSSDUG00000015866	dcp1a	100	66.339	ENSFHEG00000022838	dcp1a	100	67.323	Fundulus_heteroclitus
ENSSDUG00000015866	dcp1a	100	59.612	ENSGMOG00000014258	dcp1a	100	60.000	Gadus_morhua
ENSSDUG00000015866	dcp1a	75	57.692	ENSGALG00000041547	DCP1A	68	57.692	Gallus_gallus
ENSSDUG00000015866	dcp1a	95	68.323	ENSGAFG00000019076	dcp1a	96	68.530	Gambusia_affinis
ENSSDUG00000015866	dcp1a	100	65.133	ENSGACG00000005995	dcp1a	100	64.602	Gasterosteus_aculeatus
ENSSDUG00000015866	dcp1a	76	59.322	ENSGAGG00000010217	DCP1A	69	59.322	Gopherus_agassizii
ENSSDUG00000015866	dcp1a	100	77.165	ENSHBUG00000007164	dcp1a	100	76.969	Haplochromis_burtoni
ENSSDUG00000015866	dcp1a	100	38.127	ENSHGLG00000004679	DCP1A	82	46.273	Heterocephalus_glaber_female
ENSSDUG00000015866	dcp1a	100	38.127	ENSHGLG00100017160	DCP1A	82	46.273	Heterocephalus_glaber_male
ENSSDUG00000015866	dcp1a	100	52.724	ENSIPUG00000024374	dcp1a	99	52.621	Ictalurus_punctatus
ENSSDUG00000015866	dcp1a	99	38.632	ENSSTOG00000004632	DCP1A	99	38.078	Ictidomys_tridecemlineatus
ENSSDUG00000015866	dcp1a	100	65.953	ENSKMAG00000011720	dcp1a	100	66.862	Kryptolebias_marmoratus
ENSSDUG00000015866	dcp1a	99	42.042	ENSLACG00000013895	DCP1A	99	41.522	Latimeria_chalumnae
ENSSDUG00000015866	dcp1a	100	46.312	ENSLOCG00000014108	dcp1a	100	44.857	Lepisosteus_oculatus
ENSSDUG00000015866	dcp1a	99	38.053	ENSMFAG00000040374	DCP1A	58	46.462	Macaca_fascicularis
ENSSDUG00000015866	dcp1a	62	46.462	ENSMNEG00000015025	DCP1A	58	46.462	Macaca_nemestrina
ENSSDUG00000015866	dcp1a	100	72.047	ENSMAMG00000016948	dcp1a	79	100.000	Mastacembelus_armatus
ENSSDUG00000015866	dcp1a	100	77.120	ENSMZEG00005020706	dcp1a	100	76.923	Maylandia_zebra
ENSSDUG00000015866	dcp1a	62	55.385	ENSMGAG00000005731	DCP1A	58	55.385	Meleagris_gallopavo
ENSSDUG00000015866	dcp1a	64	45.373	ENSMICG00000010929	DCP1A	55	46.082	Microcebus_murinus
ENSSDUG00000015866	dcp1a	100	79.487	ENSMALG00000003979	dcp1a	100	79.487	Monopterus_albus
ENSSDUG00000015866	dcp1a	98	38.765	MGP_CAROLIEiJ_G0019050	Dcp1a	79	47.742	Mus_caroli
ENSSDUG00000015866	dcp1a	98	39.243	ENSMUSG00000021962	Dcp1a	93	63.636	Mus_musculus
ENSSDUG00000015866	dcp1a	98	39.310	MGP_PahariEiJ_G0030067	Dcp1a	71	47.923	Mus_pahari
ENSSDUG00000015866	dcp1a	98	38.103	MGP_SPRETEiJ_G0019935	Dcp1a	71	47.452	Mus_spretus
ENSSDUG00000015866	dcp1a	99	38.488	ENSMPUG00000016817	DCP1A	96	37.973	Mustela_putorius_furo
ENSSDUG00000015866	dcp1a	99	37.435	ENSMLUG00000000956	DCP1A	96	37.262	Myotis_lucifugus
ENSSDUG00000015866	dcp1a	99	37.564	ENSNLEG00000007219	DCP1A	55	46.562	Nomascus_leucogenys
ENSSDUG00000015866	dcp1a	61	45.455	ENSMEUG00000000054	-	56	46.067	Notamacropus_eugenii
ENSSDUG00000015866	dcp1a	73	42.146	ENSOPRG00000009919	DCP1A	55	52.632	Ochotona_princeps
ENSSDUG00000015866	dcp1a	100	78.107	ENSONIG00000001897	dcp1a	97	77.909	Oreochromis_niloticus
ENSSDUG00000015866	dcp1a	56	45.122	ENSOANG00000030354	-	82	45.122	Ornithorhynchus_anatinus
ENSSDUG00000015866	dcp1a	74	56.522	ENSOCUG00000011971	DCP1A	96	37.966	Oryctolagus_cuniculus
ENSSDUG00000015866	dcp1a	100	65.476	ENSORLG00000003413	dcp1a	100	65.476	Oryzias_latipes
ENSSDUG00000015866	dcp1a	100	65.476	ENSORLG00020017737	dcp1a	100	65.476	Oryzias_latipes_hni
ENSSDUG00000015866	dcp1a	100	65.675	ENSORLG00015009618	dcp1a	100	65.675	Oryzias_latipes_hsok
ENSSDUG00000015866	dcp1a	100	65.878	ENSOMEG00000006207	dcp1a	100	66.272	Oryzias_melastigma
ENSSDUG00000015866	dcp1a	99	37.349	ENSOGAG00000016915	DCP1A	55	46.562	Otolemur_garnettii
ENSSDUG00000015866	dcp1a	73	53.200	ENSOARG00000016637	DCP1A	67	56.087	Ovis_aries
ENSSDUG00000015866	dcp1a	89	45.000	ENSPPRG00000005751	DCP1A	75	46.395	Panthera_pardus
ENSSDUG00000015866	dcp1a	89	45.294	ENSPTIG00000012296	DCP1A	75	46.708	Panthera_tigris_altaica
ENSSDUG00000015866	dcp1a	100	38.028	ENSPANG00000011562	DCP1A	58	46.462	Papio_anubis
ENSSDUG00000015866	dcp1a	100	49.156	ENSPKIG00000024486	dcp1a	100	49.156	Paramormyrops_kingsleyae
ENSSDUG00000015866	dcp1a	73	57.203	ENSPSIG00000003282	DCP1A	65	57.203	Pelodiscus_sinensis
ENSSDUG00000015866	dcp1a	100	69.291	ENSPFOG00000024583	dcp1a	100	68.898	Poecilia_formosa
ENSSDUG00000015866	dcp1a	100	70.138	ENSPLAG00000009422	dcp1a	89	69.941	Poecilia_latipinna
ENSSDUG00000015866	dcp1a	100	69.488	ENSPMEG00000006366	dcp1a	100	69.094	Poecilia_mexicana
ENSSDUG00000015866	dcp1a	100	69.548	ENSPREG00000000750	dcp1a	100	69.548	Poecilia_reticulata
ENSSDUG00000015866	dcp1a	99	38.079	ENSPCOG00000028534	DCP1A	75	46.875	Propithecus_coquereli
ENSSDUG00000015866	dcp1a	99	38.462	ENSPVAG00000016284	DCP1A	99	38.120	Pteropus_vampyrus
ENSSDUG00000015866	dcp1a	100	52.816	ENSPNAG00000001685	dcp1a	100	53.529	Pygocentrus_nattereri
ENSSDUG00000015866	dcp1a	98	38.261	ENSRNOG00000016015	Dcp1a	79	49.032	Rattus_norvegicus
ENSSDUG00000015866	dcp1a	99	31.729	ENSSBOG00000018181	DCP1A	53	36.364	Saimiri_boliviensis_boliviensis
ENSSDUG00000015866	dcp1a	91	38.252	ENSSHAG00000017202	DCP1A	50	56.915	Sarcophilus_harrisii
ENSSDUG00000015866	dcp1a	100	48.582	ENSSFOG00015019471	dcp1a	98	49.248	Scleropages_formosus
ENSSDUG00000015866	dcp1a	100	80.522	ENSSMAG00000014519	dcp1a	100	80.522	Scophthalmus_maximus
ENSSDUG00000015866	dcp1a	100	97.576	ENSSLDG00000023089	dcp1a	100	97.576	Seriola_lalandi_dorsalis
ENSSDUG00000015866	dcp1a	99	35.945	ENSSARG00000000970	DCP1A	99	35.726	Sorex_araneus
ENSSDUG00000015866	dcp1a	100	82.051	ENSSPAG00000006215	dcp1a	100	82.051	Stegastes_partitus
ENSSDUG00000015866	dcp1a	99	37.415	ENSSSCG00000022616	DCP1A	71	53.200	Sus_scrofa
ENSSDUG00000015866	dcp1a	100	73.031	ENSTRUG00000003429	dcp1a	100	73.031	Takifugu_rubripes
ENSSDUG00000015866	dcp1a	100	72.771	ENSTNIG00000001969	dcp1a	89	72.771	Tetraodon_nigroviridis
ENSSDUG00000015866	dcp1a	62	64.706	ENSTBEG00000012697	DCP1A	58	64.706	Tupaia_belangeri
ENSSDUG00000015866	dcp1a	99	38.937	ENSUAMG00000007386	DCP1A	99	38.593	Ursus_americanus
ENSSDUG00000015866	dcp1a	99	39.108	ENSUMAG00000020222	DCP1A	96	38.765	Ursus_maritimus
ENSSDUG00000015866	dcp1a	63	42.771	ENSVPAG00000002194	DCP1A	55	42.947	Vicugna_pacos
ENSSDUG00000015866	dcp1a	99	38.488	ENSVVUG00000023423	DCP1A	99	38.488	Vulpes_vulpes
ENSSDUG00000015866	dcp1a	100	69.216	ENSXMAG00000028395	dcp1a	100	69.412	Xiphophorus_maculatus