EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000015931 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-89b17.4
Alias: fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name: si:dkey-89b17.4
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 9983 bases
Position: chrBDQW01000166.1:352476-362458
Accession: ZDB-GENE-030131-8215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000021884	zf-C2H2	PF00096.26	1.3e-54	1	6
ENSSDUP00000021884	zf-C2H2	PF00096.26	1.3e-54	2	6
ENSSDUP00000021884	zf-C2H2	PF00096.26	1.3e-54	3	6
ENSSDUP00000021884	zf-C2H2	PF00096.26	1.3e-54	4	6
ENSSDUP00000021884	zf-C2H2	PF00096.26	1.3e-54	5	6
ENSSDUP00000021884	zf-C2H2	PF00096.26	1.3e-54	6	6
ENSSDUP00000021884	zf-met	PF12874.7	2.5e-09	1	2
ENSSDUP00000021884	zf-met	PF12874.7	2.5e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022291	-	8271	-	ENSSDUP00000021884	1254 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000015931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000015931	si:dkey-89b17.4	90	30.798	ENSSDUG00000009534	-	62	41.026
ENSSDUG00000015931	si:dkey-89b17.4	60	37.815	ENSSDUG00000004650	-	94	37.931
ENSSDUG00000015931	si:dkey-89b17.4	95	30.233	ENSSDUG00000009601	-	86	38.462
ENSSDUG00000015931	si:dkey-89b17.4	96	35.632	ENSSDUG00000000946	-	94	38.961
ENSSDUG00000015931	si:dkey-89b17.4	61	38.053	ENSSDUG00000020788	-	63	38.053
ENSSDUG00000015931	si:dkey-89b17.4	76	35.484	ENSSDUG00000015191	-	90	35.484
ENSSDUG00000015931	si:dkey-89b17.4	65	45.333	ENSSDUG00000013904	-	67	45.333
ENSSDUG00000015931	si:dkey-89b17.4	98	42.130	ENSSDUG00000002675	znf646	98	42.077
ENSSDUG00000015931	si:dkey-89b17.4	70	41.935	ENSSDUG00000006426	-	92	41.935
ENSSDUG00000015931	si:dkey-89b17.4	67	37.179	ENSSDUG00000009439	-	97	30.303
ENSSDUG00000015931	si:dkey-89b17.4	59	31.481	ENSSDUG00000022170	zbtb49	50	31.481
ENSSDUG00000015931	si:dkey-89b17.4	95	32.143	ENSSDUG00000000799	-	67	32.143
ENSSDUG00000015931	si:dkey-89b17.4	67	36.522	ENSSDUG00000000786	-	83	37.931
ENSSDUG00000015931	si:dkey-89b17.4	61	36.522	ENSSDUG00000008943	-	79	36.522
ENSSDUG00000015931	si:dkey-89b17.4	81	40.789	ENSSDUG00000011170	znf236	69	40.789
ENSSDUG00000015931	si:dkey-89b17.4	63	35.135	ENSSDUG00000020810	-	67	35.135
ENSSDUG00000015931	si:dkey-89b17.4	61	31.522	ENSSDUG00000004089	-	96	30.131

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015931	si:dkey-89b17.4	100	97.293	ENSAPOG00000018015	si:dkey-89b17.4	100	97.293	Acanthochromis_polyacanthus
ENSSDUG00000015931	si:dkey-89b17.4	98	40.968	ENSAPOG00000020151	znf646	98	41.263	Acanthochromis_polyacanthus
ENSSDUG00000015931	si:dkey-89b17.4	100	93.301	ENSACIG00000001025	si:dkey-89b17.4	100	92.982	Amphilophus_citrinellus
ENSSDUG00000015931	si:dkey-89b17.4	96	41.873	ENSACIG00000023049	znf646	94	54.545	Amphilophus_citrinellus
ENSSDUG00000015931	si:dkey-89b17.4	96	41.347	ENSAOCG00000012062	znf646	98	41.673	Amphiprion_ocellaris
ENSSDUG00000015931	si:dkey-89b17.4	100	97.452	ENSAOCG00000018684	si:dkey-89b17.4	100	97.452	Amphiprion_ocellaris
ENSSDUG00000015931	si:dkey-89b17.4	100	97.452	ENSAPEG00000007719	si:dkey-89b17.4	100	97.452	Amphiprion_percula
ENSSDUG00000015931	si:dkey-89b17.4	98	40.692	ENSAPEG00000006427	znf646	98	41.014	Amphiprion_percula
ENSSDUG00000015931	si:dkey-89b17.4	98	40.892	ENSATEG00000015206	znf646	98	41.558	Anabas_testudineus
ENSSDUG00000015931	si:dkey-89b17.4	100	96.815	ENSATEG00000016814	si:dkey-89b17.4	100	96.815	Anabas_testudineus
ENSSDUG00000015931	si:dkey-89b17.4	96	42.027	ENSACLG00000012712	znf646	98	42.335	Astatotilapia_calliptera
ENSSDUG00000015931	si:dkey-89b17.4	100	94.913	ENSACLG00000016017	si:dkey-89b17.4	100	94.833	Astatotilapia_calliptera
ENSSDUG00000015931	si:dkey-89b17.4	98	41.031	ENSAMXG00000035525	znf646	99	39.804	Astyanax_mexicanus
ENSSDUG00000015931	si:dkey-89b17.4	99	67.431	ENSAMXG00000001155	si:dkey-89b17.4	99	66.946	Astyanax_mexicanus
ENSSDUG00000015931	si:dkey-89b17.4	98	39.801	ENSCSEG00000012389	znf646	98	50.000	Cynoglossus_semilaevis
ENSSDUG00000015931	si:dkey-89b17.4	98	85.354	ENSCSEG00000010769	si:dkey-89b17.4	98	85.028	Cynoglossus_semilaevis
ENSSDUG00000015931	si:dkey-89b17.4	100	90.938	ENSCVAG00000012420	si:dkey-89b17.4	100	91.097	Cyprinodon_variegatus
ENSSDUG00000015931	si:dkey-89b17.4	96	46.602	ENSDARG00000061424	znf646	98	46.429	Danio_rerio
ENSSDUG00000015931	si:dkey-89b17.4	99	66.260	ENSDARG00000075545	si:dkey-89b17.4	99	66.209	Danio_rerio
ENSSDUG00000015931	si:dkey-89b17.4	96	42.748	ENSELUG00000010423	znf646	98	43.405	Esox_lucius
ENSSDUG00000015931	si:dkey-89b17.4	96	75.117	ENSELUG00000015516	si:dkey-89b17.4	98	75.274	Esox_lucius
ENSSDUG00000015931	si:dkey-89b17.4	100	90.880	ENSFHEG00000019457	si:dkey-89b17.4	100	91.515	Fundulus_heteroclitus
ENSSDUG00000015931	si:dkey-89b17.4	94	50.000	ENSFHEG00000000561	znf646	98	47.761	Fundulus_heteroclitus
ENSSDUG00000015931	si:dkey-89b17.4	98	60.377	ENSGMOG00000016554	znf646	99	60.377	Gadus_morhua
ENSSDUG00000015931	si:dkey-89b17.4	63	53.968	ENSGAFG00000016353	-	85	53.968	Gambusia_affinis
ENSSDUG00000015931	si:dkey-89b17.4	100	92.829	ENSGAFG00000000345	si:dkey-89b17.4	100	92.829	Gambusia_affinis
ENSSDUG00000015931	si:dkey-89b17.4	96	60.377	ENSGACG00000008733	znf646	98	60.377	Gasterosteus_aculeatus
ENSSDUG00000015931	si:dkey-89b17.4	98	77.419	ENSGACG00000014714	si:dkey-89b17.4	99	77.419	Gasterosteus_aculeatus
ENSSDUG00000015931	si:dkey-89b17.4	100	94.992	ENSHBUG00000013093	si:dkey-89b17.4	100	94.913	Haplochromis_burtoni
ENSSDUG00000015931	si:dkey-89b17.4	96	41.882	ENSHBUG00000004840	znf646	92	61.818	Haplochromis_burtoni
ENSSDUG00000015931	si:dkey-89b17.4	97	40.258	ENSHCOG00000014890	znf646	100	40.274	Hippocampus_comes
ENSSDUG00000015931	si:dkey-89b17.4	100	89.411	ENSHCOG00000001901	si:dkey-89b17.4	100	89.490	Hippocampus_comes
ENSSDUG00000015931	si:dkey-89b17.4	96	41.308	ENSIPUG00000018102	znf646	98	40.683	Ictalurus_punctatus
ENSSDUG00000015931	si:dkey-89b17.4	96	66.932	ENSIPUG00000012845	si:dkey-89b17.4	98	67.037	Ictalurus_punctatus
ENSSDUG00000015931	si:dkey-89b17.4	100	91.812	ENSKMAG00000014037	si:dkey-89b17.4	100	92.051	Kryptolebias_marmoratus
ENSSDUG00000015931	si:dkey-89b17.4	94	40.517	ENSKMAG00000011982	znf646	98	41.176	Kryptolebias_marmoratus
ENSSDUG00000015931	si:dkey-89b17.4	98	40.658	ENSLBEG00000016562	znf646	99	40.398	Labrus_bergylta
ENSSDUG00000015931	si:dkey-89b17.4	100	95.618	ENSLBEG00000020291	si:dkey-89b17.4	100	95.936	Labrus_bergylta
ENSSDUG00000015931	si:dkey-89b17.4	96	46.774	ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	Lepisosteus_oculatus
ENSSDUG00000015931	si:dkey-89b17.4	98	42.417	ENSMAMG00000009313	znf646	98	42.417	Mastacembelus_armatus
ENSSDUG00000015931	si:dkey-89b17.4	100	96.738	ENSMAMG00000009604	si:dkey-89b17.4	100	96.738	Mastacembelus_armatus
ENSSDUG00000015931	si:dkey-89b17.4	100	94.913	ENSMZEG00005003901	si:dkey-89b17.4	100	94.833	Maylandia_zebra
ENSSDUG00000015931	si:dkey-89b17.4	96	42.027	ENSMZEG00005011264	znf646	98	42.335	Maylandia_zebra
ENSSDUG00000015931	si:dkey-89b17.4	100	94.099	ENSMMOG00000012741	si:dkey-89b17.4	100	94.099	Mola_mola
ENSSDUG00000015931	si:dkey-89b17.4	97	42.009	ENSMMOG00000002311	znf646	100	42.114	Mola_mola
ENSSDUG00000015931	si:dkey-89b17.4	97	40.000	ENSMALG00000002274	-	99	40.000	Monopterus_albus
ENSSDUG00000015931	si:dkey-89b17.4	100	97.066	ENSMALG00000019558	si:dkey-89b17.4	100	97.066	Monopterus_albus
ENSSDUG00000015931	si:dkey-89b17.4	96	41.973	ENSNBRG00000022534	znf646	98	42.203	Neolamprologus_brichardi
ENSSDUG00000015931	si:dkey-89b17.4	98	94.728	ENSNBRG00000020314	si:dkey-89b17.4	99	94.647	Neolamprologus_brichardi
ENSSDUG00000015931	si:dkey-89b17.4	95	71.750	ENSONIG00000009324	si:dkey-89b17.4	99	71.750	Oreochromis_niloticus
ENSSDUG00000015931	si:dkey-89b17.4	98	41.860	ENSONIG00000019947	-	99	37.666	Oreochromis_niloticus
ENSSDUG00000015931	si:dkey-89b17.4	96	38.510	ENSORLG00000007885	znf646	98	38.687	Oryzias_latipes
ENSSDUG00000015931	si:dkey-89b17.4	100	89.499	ENSORLG00000024255	si:dkey-89b17.4	100	89.260	Oryzias_latipes
ENSSDUG00000015931	si:dkey-89b17.4	98	38.528	ENSORLG00020010285	znf646	98	38.819	Oryzias_latipes_hni
ENSSDUG00000015931	si:dkey-89b17.4	96	38.697	ENSORLG00015008733	znf646	98	38.498	Oryzias_latipes_hsok
ENSSDUG00000015931	si:dkey-89b17.4	96	39.449	ENSOMEG00000015658	znf646	99	39.246	Oryzias_melastigma
ENSSDUG00000015931	si:dkey-89b17.4	100	89.905	ENSOMEG00000020587	si:dkey-89b17.4	100	89.666	Oryzias_melastigma
ENSSDUG00000015931	si:dkey-89b17.4	97	68.741	ENSPMGG00000015931	-	100	68.242	Periophthalmus_magnuspinnatus
ENSSDUG00000015931	si:dkey-89b17.4	88	52.459	ENSPMGG00000004639	znf646	98	35.393	Periophthalmus_magnuspinnatus
ENSSDUG00000015931	si:dkey-89b17.4	95	37.647	ENSPFOG00000004826	-	99	38.679	Poecilia_formosa
ENSSDUG00000015931	si:dkey-89b17.4	100	92.601	ENSPFOG00000008241	si:dkey-89b17.4	100	92.761	Poecilia_formosa
ENSSDUG00000015931	si:dkey-89b17.4	100	92.681	ENSPLAG00000011382	si:dkey-89b17.4	100	92.840	Poecilia_latipinna
ENSSDUG00000015931	si:dkey-89b17.4	97	40.037	ENSPLAG00000010454	-	98	32.327	Poecilia_latipinna
ENSSDUG00000015931	si:dkey-89b17.4	100	92.601	ENSPMEG00000000141	si:dkey-89b17.4	100	92.761	Poecilia_mexicana
ENSSDUG00000015931	si:dkey-89b17.4	98	39.483	ENSPMEG00000018283	znf646	98	36.170	Poecilia_mexicana
ENSSDUG00000015931	si:dkey-89b17.4	97	46.341	ENSPREG00000017637	znf646	98	37.915	Poecilia_reticulata
ENSSDUG00000015931	si:dkey-89b17.4	100	92.840	ENSPREG00000012579	si:dkey-89b17.4	100	92.999	Poecilia_reticulata
ENSSDUG00000015931	si:dkey-89b17.4	96	41.870	ENSPNYG00000017692	znf646	98	42.335	Pundamilia_nyererei
ENSSDUG00000015931	si:dkey-89b17.4	100	94.992	ENSPNYG00000011901	si:dkey-89b17.4	100	94.913	Pundamilia_nyererei
ENSSDUG00000015931	si:dkey-89b17.4	96	66.953	ENSPNAG00000022072	si:dkey-89b17.4	98	66.536	Pygocentrus_nattereri
ENSSDUG00000015931	si:dkey-89b17.4	96	41.792	ENSPNAG00000000750	znf646	98	41.458	Pygocentrus_nattereri
ENSSDUG00000015931	si:dkey-89b17.4	98	39.410	ENSSFOG00015004737	si:dkey-89b17.4	98	63.265	Scleropages_formosus
ENSSDUG00000015931	si:dkey-89b17.4	98	41.737	ENSSMAG00000012378	znf646	98	41.577	Scophthalmus_maximus
ENSSDUG00000015931	si:dkey-89b17.4	98	41.975	ENSSLDG00000018521	znf646	98	41.943	Seriola_lalandi_dorsalis
ENSSDUG00000015931	si:dkey-89b17.4	100	99.920	ENSSLDG00000012415	si:dkey-89b17.4	100	99.920	Seriola_lalandi_dorsalis
ENSSDUG00000015931	si:dkey-89b17.4	100	97.293	ENSSPAG00000018810	si:dkey-89b17.4	100	97.293	Stegastes_partitus
ENSSDUG00000015931	si:dkey-89b17.4	98	42.183	ENSSPAG00000016701	znf646	98	60.714	Stegastes_partitus
ENSSDUG00000015931	si:dkey-89b17.4	100	91.388	ENSTRUG00000020495	si:dkey-89b17.4	100	91.467	Takifugu_rubripes
ENSSDUG00000015931	si:dkey-89b17.4	100	41.433	ENSTRUG00000025597	znf646	98	40.623	Takifugu_rubripes
ENSSDUG00000015931	si:dkey-89b17.4	96	43.056	ENSTNIG00000001159	si:dkey-89b17.4	99	41.860	Tetraodon_nigroviridis
ENSSDUG00000015931	si:dkey-89b17.4	96	42.689	ENSTNIG00000000073	znf646	99	51.667	Tetraodon_nigroviridis
ENSSDUG00000015931	si:dkey-89b17.4	100	90.757	ENSXCOG00000001645	si:dkey-89b17.4	100	90.757	Xiphophorus_couchianus
ENSSDUG00000015931	si:dkey-89b17.4	97	38.147	ENSXCOG00000002714	-	95	37.602	Xiphophorus_couchianus
ENSSDUG00000015931	si:dkey-89b17.4	100	92.988	ENSXMAG00000024528	si:dkey-89b17.4	100	92.988	Xiphophorus_maculatus
ENSSDUG00000015931	si:dkey-89b17.4	98	38.692	ENSXMAG00000018743	-	96	38.172	Xiphophorus_maculatus