EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000015980 (Gene tree)
Gene ID: 111219132
Gene Symbol: ddx20
Alias: fb59a11|si:dkey-193l3.3|si:dkey-193l3.4|wu:fb16g08|wu:fb59a11
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7288 bases
Position: chrBDQW01000056.1:8543204-8550491
Accession: 111219132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022022	ResIII	PF04851.15	1.1e-05	1	1
ENSSDUP00000022032	ResIII	PF04851.15	1.3e-05	1	1
ENSSDUP00000022022	DEAD	PF00270.29	9.9e-33	1	1
ENSSDUP00000022032	DEAD	PF00270.29	1.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022439	-	2382	XM_022741726	ENSSDUP00000022032	793 (aa)	XP_022597447	UPI000BBF3AD3
ENSSDUT00000022429	-	2280	-	ENSSDUP00000022022	759 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000015980's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000015980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000015980	ddx20	51	34.794	ENSSDUG00000011557	ddx39b	88	34.794
ENSSDUG00000015980	ddx20	52	34.925	ENSSDUG00000009713	ddx61	79	34.925
ENSSDUG00000015980	ddx20	52	34.673	ENSSDUG00000019695	ddx6	80	34.673
ENSSDUG00000015980	ddx20	52	34.171	ENSSDUG00000007530	-	79	34.171
ENSSDUG00000015980	ddx20	50	35.864	ENSSDUG00000020224	ddx39aa	87	35.864
ENSSDUG00000015980	ddx20	50	31.486	ENSSDUG00000008456	fam193b	63	31.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000015980	ddx20	98	53.284	ENSG00000064703	DDX20	95	52.743	Homo_sapiens
ENSSDUG00000015980	ddx20	99	75.679	ENSAPOG00000017383	DDX20	99	75.679	Acanthochromis_polyacanthus
ENSSDUG00000015980	ddx20	98	52.141	ENSAMEG00000005344	DDX20	95	52.363	Ailuropoda_melanoleuca
ENSSDUG00000015980	ddx20	100	77.307	ENSACIG00000013095	ddx20	100	77.307	Amphilophus_citrinellus
ENSSDUG00000015980	ddx20	99	76.704	ENSAOCG00000013474	DDX20	99	76.704	Amphiprion_ocellaris
ENSSDUG00000015980	ddx20	99	77.009	ENSAPEG00000006690	ddx20	99	77.132	Amphiprion_percula
ENSSDUG00000015980	ddx20	100	75.465	ENSATEG00000002941	ddx20	100	75.465	Anabas_testudineus
ENSSDUG00000015980	ddx20	92	41.906	ENSAPLG00000013826	DDX20	81	50.000	Anas_platyrhynchos
ENSSDUG00000015980	ddx20	97	52.571	ENSACAG00000006235	DDX20	98	52.625	Anolis_carolinensis
ENSSDUG00000015980	ddx20	98	52.369	ENSANAG00000037881	DDX20	95	51.617	Aotus_nancymaae
ENSSDUG00000015980	ddx20	99	75.935	ENSACLG00000009485	ddx20	99	76.434	Astatotilapia_calliptera
ENSSDUG00000015980	ddx20	80	71.601	ENSAMXG00000040738	ddx20	73	69.799	Astyanax_mexicanus
ENSSDUG00000015980	ddx20	98	52.757	ENSBTAG00000018717	DDX20	95	52.605	Bos_taurus
ENSSDUG00000015980	ddx20	98	52.553	ENSCJAG00000013428	DDX20	91	51.637	Callithrix_jacchus
ENSSDUG00000015980	ddx20	98	52.553	ENSCAFG00000013674	DDX20	95	52.228	Canis_familiaris
ENSSDUG00000015980	ddx20	98	52.986	ENSCAFG00020008055	DDX20	91	78.548	Canis_lupus_dingo
ENSSDUG00000015980	ddx20	98	53.008	ENSCHIG00000011219	DDX20	95	52.854	Capra_hircus
ENSSDUG00000015980	ddx20	98	53.208	ENSTSYG00000000153	DDX20	95	52.956	Carlito_syrichta
ENSSDUG00000015980	ddx20	75	73.066	ENSCAPG00000017427	DDX20	80	76.074	Cavia_aperea
ENSSDUG00000015980	ddx20	98	52.114	ENSCPOG00000032340	DDX20	95	51.292	Cavia_porcellus
ENSSDUG00000015980	ddx20	98	52.547	ENSCCAG00000026759	DDX20	95	51.728	Cebus_capucinus
ENSSDUG00000015980	ddx20	98	52.854	ENSCATG00000039030	DDX20	95	51.801	Cercocebus_atys
ENSSDUG00000015980	ddx20	98	53.483	ENSCLAG00000008874	DDX20	95	52.481	Chinchilla_lanigera
ENSSDUG00000015980	ddx20	98	52.978	ENSCSAG00000001582	DDX20	94	51.925	Chlorocebus_sabaeus
ENSSDUG00000015980	ddx20	51	77.407	ENSCHOG00000002610	DDX20	50	77.407	Choloepus_hoffmanni
ENSSDUG00000015980	ddx20	97	53.046	ENSCPBG00000021256	DDX20	99	52.618	Chrysemys_picta_bellii
ENSSDUG00000015980	ddx20	52	61.111	ENSCSAVG00000003045	-	98	61.111	Ciona_savignyi
ENSSDUG00000015980	ddx20	98	52.298	ENSCANG00000041894	DDX20	95	51.429	Colobus_angolensis_palliatus
ENSSDUG00000015980	ddx20	98	53.102	ENSCGRG00001014132	Ddx20	95	52.723	Cricetulus_griseus_chok1gshd
ENSSDUG00000015980	ddx20	90	50.270	ENSCGRG00000002300	Ddx20	99	49.865	Cricetulus_griseus_crigri
ENSSDUG00000015980	ddx20	86	67.791	ENSCSEG00000018265	DDX20	79	72.549	Cynoglossus_semilaevis
ENSSDUG00000015980	ddx20	99	69.260	ENSCVAG00000014821	ddx20	99	68.878	Cyprinodon_variegatus
ENSSDUG00000015980	ddx20	99	56.462	ENSDARG00000061204	ddx20	97	57.125	Danio_rerio
ENSSDUG00000015980	ddx20	98	52.993	ENSDNOG00000030865	DDX20	95	52.233	Dasypus_novemcinctus
ENSSDUG00000015980	ddx20	99	52.369	ENSDORG00000011660	Ddx20	96	52.823	Dipodomys_ordii
ENSSDUG00000015980	ddx20	98	51.422	ENSEASG00005005454	DDX20	95	53.008	Equus_asinus_asinus
ENSSDUG00000015980	ddx20	98	50.730	ENSECAG00000013565	DDX20	95	52.757	Equus_caballus
ENSSDUG00000015980	ddx20	99	62.375	ENSELUG00000010260	ddx20	99	61.750	Esox_lucius
ENSSDUG00000015980	ddx20	98	52.993	ENSFCAG00000025736	DDX20	95	53.074	Felis_catus
ENSSDUG00000015980	ddx20	91	49.725	ENSFALG00000000666	DDX20	99	49.391	Ficedula_albicollis
ENSSDUG00000015980	ddx20	98	50.843	ENSFDAG00000001140	DDX20	95	50.723	Fukomys_damarensis
ENSSDUG00000015980	ddx20	99	72.051	ENSFHEG00000019742	ddx20	99	70.641	Fundulus_heteroclitus
ENSSDUG00000015980	ddx20	97	53.758	ENSGALG00000001504	DDX20	99	53.137	Gallus_gallus
ENSSDUG00000015980	ddx20	99	70.860	ENSGAFG00000006427	ddx20	100	71.117	Gambusia_affinis
ENSSDUG00000015980	ddx20	97	52.405	ENSGAGG00000000130	DDX20	99	52.963	Gopherus_agassizii
ENSSDUG00000015980	ddx20	98	52.109	ENSGGOG00000015576	DDX20	95	52.802	Gorilla_gorilla
ENSSDUG00000015980	ddx20	99	76.434	ENSHBUG00000007853	ddx20	99	76.434	Haplochromis_burtoni
ENSSDUG00000015980	ddx20	98	52.445	ENSHGLG00000014848	DDX20	95	52.605	Heterocephalus_glaber_female
ENSSDUG00000015980	ddx20	98	52.445	ENSHGLG00100003740	DDX20	95	52.605	Heterocephalus_glaber_male
ENSSDUG00000015980	ddx20	99	68.031	ENSHCOG00000001915	ddx20	100	67.903	Hippocampus_comes
ENSSDUG00000015980	ddx20	74	70.609	ENSIPUG00000004876	ddx20	99	58.663	Ictalurus_punctatus
ENSSDUG00000015980	ddx20	98	52.540	ENSSTOG00000029089	DDX20	95	52.298	Ictidomys_tridecemlineatus
ENSSDUG00000015980	ddx20	99	54.332	ENSJJAG00000011198	Ddx20	95	54.037	Jaculus_jaculus
ENSSDUG00000015980	ddx20	100	71.357	ENSKMAG00000019022	ddx20	100	71.772	Kryptolebias_marmoratus
ENSSDUG00000015980	ddx20	100	74.655	ENSLBEG00000019194	ddx20	98	74.165	Labrus_bergylta
ENSSDUG00000015980	ddx20	99	53.519	ENSLACG00000018491	DDX20	99	53.285	Latimeria_chalumnae
ENSSDUG00000015980	ddx20	98	57.980	ENSLOCG00000010372	ddx20	99	57.697	Lepisosteus_oculatus
ENSSDUG00000015980	ddx20	95	51.889	ENSLAFG00000014646	DDX20	95	50.441	Loxodonta_africana
ENSSDUG00000015980	ddx20	98	52.854	ENSMFAG00000031755	DDX20	95	51.801	Macaca_fascicularis
ENSSDUG00000015980	ddx20	98	52.854	ENSMNEG00000005757	DDX20	95	51.801	Macaca_nemestrina
ENSSDUG00000015980	ddx20	98	52.736	ENSMLEG00000005722	DDX20	95	51.741	Mandrillus_leucophaeus
ENSSDUG00000015980	ddx20	100	78.315	ENSMAMG00000009654	ddx20	100	78.315	Mastacembelus_armatus
ENSSDUG00000015980	ddx20	99	76.060	ENSMZEG00005027081	ddx20	99	76.559	Maylandia_zebra
ENSSDUG00000015980	ddx20	95	53.010	ENSMGAG00000004624	DDX20	99	52.536	Meleagris_gallopavo
ENSSDUG00000015980	ddx20	98	52.645	ENSMAUG00000010659	Ddx20	95	52.898	Mesocricetus_auratus
ENSSDUG00000015980	ddx20	98	52.723	ENSMICG00000011509	DDX20	95	52.005	Microcebus_murinus
ENSSDUG00000015980	ddx20	98	52.190	ENSMOCG00000012954	Ddx20	95	52.625	Microtus_ochrogaster
ENSSDUG00000015980	ddx20	99	72.172	ENSMMOG00000013103	ddx20	99	72.172	Mola_mola
ENSSDUG00000015980	ddx20	98	52.488	ENSMODG00000001311	DDX20	94	53.165	Monodelphis_domestica
ENSSDUG00000015980	ddx20	99	77.792	ENSMALG00000010740	ddx20	97	77.667	Monopterus_albus
ENSSDUG00000015980	ddx20	99	52.861	MGP_CAROLIEiJ_G0025474	Ddx20	95	52.736	Mus_caroli
ENSSDUG00000015980	ddx20	99	53.300	ENSMUSG00000027905	Ddx20	95	52.559	Mus_musculus
ENSSDUG00000015980	ddx20	98	53.509	MGP_PahariEiJ_G0026919	Ddx20	94	53.141	Mus_pahari
ENSSDUG00000015980	ddx20	99	53.300	MGP_SPRETEiJ_G0026423	Ddx20	95	53.176	Mus_spretus
ENSSDUG00000015980	ddx20	98	53.194	ENSMPUG00000004921	DDX20	95	51.866	Mustela_putorius_furo
ENSSDUG00000015980	ddx20	86	47.759	ENSMLUG00000009676	DDX20	99	47.514	Myotis_lucifugus
ENSSDUG00000015980	ddx20	98	52.410	ENSNGAG00000022953	Ddx20	95	52.750	Nannospalax_galili
ENSSDUG00000015980	ddx20	99	75.810	ENSNBRG00000020244	ddx20	99	75.686	Neolamprologus_brichardi
ENSSDUG00000015980	ddx20	98	53.043	ENSNLEG00000004040	DDX20	95	52.163	Nomascus_leucogenys
ENSSDUG00000015980	ddx20	55	70.248	ENSMEUG00000013459	-	51	70.248	Notamacropus_eugenii
ENSSDUG00000015980	ddx20	62	77.259	ENSOPRG00000004035	DDX20	78	77.259	Ochotona_princeps
ENSSDUG00000015980	ddx20	99	77.618	ENSONIG00000012436	ddx20	99	77.749	Oreochromis_niloticus
ENSSDUG00000015980	ddx20	65	63.810	ENSOANG00000003318	DDX20	95	56.459	Ornithorhynchus_anatinus
ENSSDUG00000015980	ddx20	98	53.317	ENSOCUG00000025939	DDX20	95	52.781	Oryctolagus_cuniculus
ENSSDUG00000015980	ddx20	100	69.424	ENSORLG00000008949	ddx20	100	70.930	Oryzias_latipes
ENSSDUG00000015980	ddx20	100	69.549	ENSORLG00020003852	ddx20	100	70.672	Oryzias_latipes_hni
ENSSDUG00000015980	ddx20	100	69.424	ENSORLG00015020167	ddx20	100	70.801	Oryzias_latipes_hsok
ENSSDUG00000015980	ddx20	100	70.514	ENSOMEG00000013657	ddx20	100	70.897	Oryzias_melastigma
ENSSDUG00000015980	ddx20	98	53.117	ENSOGAG00000010503	DDX20	95	52.363	Otolemur_garnettii
ENSSDUG00000015980	ddx20	98	53.000	ENSOARG00000019651	DDX20	95	52.847	Ovis_aries
ENSSDUG00000015980	ddx20	98	52.357	ENSPPAG00000031680	DDX20	95	53.051	Pan_paniscus
ENSSDUG00000015980	ddx20	98	52.993	ENSPPRG00000022979	DDX20	95	53.074	Panthera_pardus
ENSSDUG00000015980	ddx20	98	52.357	ENSPTRG00000001105	DDX20	95	53.051	Pan_troglodytes
ENSSDUG00000015980	ddx20	98	52.854	ENSPANG00000017985	DDX20	95	51.801	Papio_anubis
ENSSDUG00000015980	ddx20	95	56.662	ENSPKIG00000020161	ddx20	99	56.334	Paramormyrops_kingsleyae
ENSSDUG00000015980	ddx20	91	51.913	ENSPSIG00000003636	DDX20	99	51.463	Pelodiscus_sinensis
ENSSDUG00000015980	ddx20	99	66.836	ENSPMGG00000005966	ddx20	100	66.201	Periophthalmus_magnuspinnatus
ENSSDUG00000015980	ddx20	98	54.047	ENSPEMG00000019595	Ddx20	95	53.028	Peromyscus_maniculatus_bairdii
ENSSDUG00000015980	ddx20	98	53.598	ENSPCIG00000027721	DDX20	95	53.468	Phascolarctos_cinereus
ENSSDUG00000015980	ddx20	100	69.240	ENSPFOG00000010540	ddx20	100	70.000	Poecilia_formosa
ENSSDUG00000015980	ddx20	99	70.679	ENSPLAG00000009925	ddx20	100	70.679	Poecilia_latipinna
ENSSDUG00000015980	ddx20	100	70.012	ENSPMEG00000005998	ddx20	100	70.588	Poecilia_mexicana
ENSSDUG00000015980	ddx20	99	70.385	ENSPREG00000018837	ddx20	100	70.551	Poecilia_reticulata
ENSSDUG00000015980	ddx20	98	52.612	ENSPPYG00000001026	DDX20	95	51.866	Pongo_abelii
ENSSDUG00000015980	ddx20	98	52.580	ENSPCOG00000025185	DDX20	95	51.788	Propithecus_coquereli
ENSSDUG00000015980	ddx20	98	52.684	ENSPVAG00000004664	DDX20	95	52.453	Pteropus_vampyrus
ENSSDUG00000015980	ddx20	99	75.935	ENSPNYG00000014433	ddx20	99	76.434	Pundamilia_nyererei
ENSSDUG00000015980	ddx20	99	58.809	ENSPNAG00000018148	ddx20	99	58.688	Pygocentrus_nattereri
ENSSDUG00000015980	ddx20	98	53.474	ENSRNOG00000015274	Ddx20	95	52.494	Rattus_norvegicus
ENSSDUG00000015980	ddx20	98	52.854	ENSRBIG00000030629	DDX20	95	51.801	Rhinopithecus_bieti
ENSSDUG00000015980	ddx20	98	52.854	ENSRROG00000030608	DDX20	95	51.801	Rhinopithecus_roxellana
ENSSDUG00000015980	ddx20	98	53.923	ENSSBOG00000024789	DDX20	95	53.442	Saimiri_boliviensis_boliviensis
ENSSDUG00000015980	ddx20	86	50.070	ENSSHAG00000014518	DDX20	72	60.757	Sarcophilus_harrisii
ENSSDUG00000015980	ddx20	99	56.835	ENSSFOG00015008354	ddx20	100	55.779	Scleropages_formosus
ENSSDUG00000015980	ddx20	99	81.796	ENSSMAG00000007498	ddx20	99	82.042	Scophthalmus_maximus
ENSSDUG00000015980	ddx20	100	98.361	ENSSLDG00000000437	ddx20	93	98.361	Seriola_lalandi_dorsalis
ENSSDUG00000015980	ddx20	90	45.047	ENSSARG00000013569	DDX20	87	44.698	Sorex_araneus
ENSSDUG00000015980	ddx20	99	78.040	ENSSPAG00000020022	ddx20	97	78.040	Stegastes_partitus
ENSSDUG00000015980	ddx20	98	53.308	ENSSSCG00000006783	DDX20	94	53.567	Sus_scrofa
ENSSDUG00000015980	ddx20	77	58.386	ENSTGUG00000013660	DDX20	86	61.329	Taeniopygia_guttata
ENSSDUG00000015980	ddx20	99	69.489	ENSTRUG00000023712	ddx20	99	70.064	Takifugu_rubripes
ENSSDUG00000015980	ddx20	99	69.162	ENSTNIG00000019425	ddx20	100	68.101	Tetraodon_nigroviridis
ENSSDUG00000015980	ddx20	81	76.351	ENSTTRG00000005131	DDX20	79	76.351	Tursiops_truncatus
ENSSDUG00000015980	ddx20	98	50.062	ENSUAMG00000018924	DDX20	95	50.871	Ursus_americanus
ENSSDUG00000015980	ddx20	91	50.000	ENSUMAG00000013897	DDX20	91	50.269	Ursus_maritimus
ENSSDUG00000015980	ddx20	98	53.817	ENSVPAG00000010031	DDX20	95	53.518	Vicugna_pacos
ENSSDUG00000015980	ddx20	98	52.882	ENSVVUG00000016236	DDX20	95	50.556	Vulpes_vulpes
ENSSDUG00000015980	ddx20	70	63.669	ENSXETG00000013568	ddx20	99	51.876	Xenopus_tropicalis
ENSSDUG00000015980	ddx20	99	69.987	ENSXCOG00000007952	ddx20	98	70.115	Xiphophorus_couchianus
ENSSDUG00000015980	ddx20	99	70.077	ENSXMAG00000007573	ddx20	100	70.205	Xiphophorus_maculatus