EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000016019 (Gene tree)
Gene ID
111237045
Gene Symbol
zgc:171971
Alias
-
Full Name
DNA-directed RNA polymerase III subunit RPC4-like
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
12444 bases
Position
chrBDQW01000807.1:1571296-1583739
Accession
111237045
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000022007RNA_pol_Rpc4PF05132.141.5e-3011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000022414-6412XM_022766001ENSSDUP00000022007404 (aa)XP_022621722UPI000BBEF3DA
Gene Model
Click here to download ENSSDUG00000016019's gene model file
Pathways
Pathway IDPathway NameSource
sdu03020RNA polymeraseKEGG
sdu04623Cytosolic DNA-sensing pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016019's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000016019zgc:1719719839.952ENSSDUG00000020718polr3d9840.876
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000016019zgc:1719719640.385ENSG00000168495POLR3D9346.032Homo_sapiens
ENSSDUG00000016019zgc:1719719137.374ENSAPOG00000012197polr3d9638.046Acanthochromis_polyacanthus
ENSSDUG00000016019zgc:1719719574.935ENSAPOG00000017634zgc:1719719972.947Acanthochromis_polyacanthus
ENSSDUG00000016019zgc:1719719640.144ENSAMEG00000003221POLR3D9840.534Ailuropoda_melanoleuca
ENSSDUG00000016019zgc:1719718739.142ENSACIG00000017832polr3d9138.544Amphilophus_citrinellus
ENSSDUG00000016019zgc:17197110066.914ENSACIG00000003707zgc:1719719968.382Amphilophus_citrinellus
ENSSDUG00000016019zgc:1719719578.497ENSAOCG00000007733zgc:17197110077.536Amphiprion_ocellaris
ENSSDUG00000016019zgc:1719719837.617ENSAOCG00000005037polr3d10038.571Amphiprion_ocellaris
ENSSDUG00000016019zgc:1719719577.202ENSAPEG00000016107zgc:17197110076.087Amphiprion_percula
ENSSDUG00000016019zgc:1719719837.383ENSAPEG00000013751polr3d10037.981Amphiprion_percula
ENSSDUG00000016019zgc:1719718939.005ENSATEG00000023119polr3d9338.168Anabas_testudineus
ENSSDUG00000016019zgc:17197110071.358ENSATEG00000023125zgc:17197110071.852Anabas_testudineus
ENSSDUG00000016019zgc:1719718238.028ENSAPLG00000014393POLR3D9937.465Anas_platyrhynchos
ENSSDUG00000016019zgc:1719718337.989ENSACAG00000010592POLR3D9237.302Anolis_carolinensis
ENSSDUG00000016019zgc:1719719640.385ENSANAG00000030023POLR3D9840.385Aotus_nancymaae
ENSSDUG00000016019zgc:17197110073.020ENSACLG00000000074zgc:17197110074.752Astatotilapia_calliptera
ENSSDUG00000016019zgc:1719719237.879ENSACLG00000010147polr3d9638.560Astatotilapia_calliptera
ENSSDUG00000016019zgc:1719718739.949ENSAMXG00000010079polr3d9240.098Astyanax_mexicanus
ENSSDUG00000016019zgc:1719719252.815ENSAMXG00000019418zgc:1719719254.692Astyanax_mexicanus
ENSSDUG00000016019zgc:1719719640.291ENSBTAG00000010036POLR3D9840.291Bos_taurus
ENSSDUG00000016019zgc:1719719640.144ENSCJAG00000020278POLR3D9140.144Callithrix_jacchus
ENSSDUG00000016019zgc:1719719640.144ENSCAFG00000009455POLR3D9840.144Canis_familiaris
ENSSDUG00000016019zgc:1719719640.144ENSCAFG00020013027POLR3D9840.144Canis_lupus_dingo
ENSSDUG00000016019zgc:1719719639.563ENSCHIG00000012279POLR3D9839.563Capra_hircus
ENSSDUG00000016019zgc:1719719640.144ENSTSYG00000009055POLR3D9840.144Carlito_syrichta
ENSSDUG00000016019zgc:1719718141.292ENSCAPG00000010394POLR3D9741.292Cavia_aperea
ENSSDUG00000016019zgc:1719719641.346ENSCPOG00000003679POLR3D9841.346Cavia_porcellus
ENSSDUG00000016019zgc:1719719640.385ENSCCAG00000019817POLR3D9840.385Cebus_capucinus
ENSSDUG00000016019zgc:1719719640.482ENSCATG00000025950POLR3D9840.482Cercocebus_atys
ENSSDUG00000016019zgc:1719719241.310ENSCLAG00000014993POLR3D9441.562Chinchilla_lanigera
ENSSDUG00000016019zgc:1719719640.482ENSCSAG00000016525POLR3D9840.482Chlorocebus_sabaeus
ENSSDUG00000016019zgc:1719716854.651ENSCHOG00000000228POLR3D9436.667Choloepus_hoffmanni
ENSSDUG00000016019zgc:1719719741.866ENSCPBG00000001313POLR3D9840.670Chrysemys_picta_bellii
ENSSDUG00000016019zgc:1719718731.250ENSCING00000008141-9130.667Ciona_intestinalis
ENSSDUG00000016019zgc:1719718931.443ENSCSAVG00000007119-9032.368Ciona_savignyi
ENSSDUG00000016019zgc:1719719640.000ENSCANG00000043589POLR3D9840.000Colobus_angolensis_palliatus
ENSSDUG00000016019zgc:1719719640.385ENSCGRG00001010339Polr3d9840.385Cricetulus_griseus_chok1gshd
ENSSDUG00000016019zgc:1719719640.385ENSCGRG00000003956Polr3d9840.385Cricetulus_griseus_crigri
ENSSDUG00000016019zgc:17197110067.076ENSCSEG00000015509zgc:17197110065.111Cynoglossus_semilaevis
ENSSDUG00000016019zgc:1719718939.678ENSCSEG00000008123polr3d9339.119Cynoglossus_semilaevis
ENSSDUG00000016019zgc:1719719052.459ENSCVAG00000009078-9353.005Cyprinodon_variegatus
ENSSDUG00000016019zgc:1719719337.408ENSCVAG00000020687polr3d9838.636Cyprinodon_variegatus
ENSSDUG00000016019zgc:1719719738.647ENSDARG00000104516polr3d9938.835Danio_rerio
ENSSDUG00000016019zgc:1719719053.425ENSDARG00000042054zgc:1719719750.877Danio_rerio
ENSSDUG00000016019zgc:1719719639.904ENSDNOG00000013488POLR3D9840.777Dasypus_novemcinctus
ENSSDUG00000016019zgc:1719719639.904ENSDORG00000011174Polr3d9839.904Dipodomys_ordii
ENSSDUG00000016019zgc:1719719040.458ENSETEG00000016516POLR3D9340.458Echinops_telfairi
ENSSDUG00000016019zgc:1719717736.390ENSEBUG00000014414polr3d9235.152Eptatretus_burgeri
ENSSDUG00000016019zgc:1719719639.904ENSEASG00005018824POLR3D9839.806Equus_asinus_asinus
ENSSDUG00000016019zgc:1719719640.865ENSECAG00000025090-9840.777Equus_caballus
ENSSDUG00000016019zgc:1719719640.777ENSEEUG00000007632POLR3D9840.777Erinaceus_europaeus
ENSSDUG00000016019zgc:1719718737.895ENSELUG00000016978polr3d9837.317Esox_lucius
ENSSDUG00000016019zgc:1719719856.479ENSELUG00000017642zgc:1719719556.235Esox_lucius
ENSSDUG00000016019zgc:1719719640.144ENSFCAG00000005346POLR3D9840.385Felis_catus
ENSSDUG00000016019zgc:1719718240.741ENSFALG00000010907POLR3D9940.741Ficedula_albicollis
ENSSDUG00000016019zgc:1719719640.385ENSFDAG00000010144POLR3D9841.262Fukomys_damarensis
ENSSDUG00000016019zgc:1719719961.347ENSFHEG00000003803-9961.097Fundulus_heteroclitus
ENSSDUG00000016019zgc:1719719738.686ENSFHEG00000000508polr3d9940.288Fundulus_heteroclitus
ENSSDUG00000016019zgc:1719718939.572ENSGMOG00000006293polr3d9839.305Gadus_morhua
ENSSDUG00000016019zgc:1719719952.261ENSGMOG00000015819zgc:17197110052.764Gadus_morhua
ENSSDUG00000016019zgc:1719717837.685ENSGALG00000032501-6038.562Gallus_gallus
ENSSDUG00000016019zgc:1719719738.142ENSGAFG00000010268polr3d9939.512Gambusia_affinis
ENSSDUG00000016019zgc:1719719961.000ENSGAFG00000009259zgc:1719719960.750Gambusia_affinis
ENSSDUG00000016019zgc:1719718738.667ENSGACG00000011126polr3d9140.533Gasterosteus_aculeatus
ENSSDUG00000016019zgc:1719719967.059ENSGACG00000015436zgc:17197110067.059Gasterosteus_aculeatus
ENSSDUG00000016019zgc:1719719741.627ENSGAGG00000023229POLR3D9840.431Gopherus_agassizii
ENSSDUG00000016019zgc:1719719640.385ENSGGOG00000007302POLR3D9840.385Gorilla_gorilla
ENSSDUG00000016019zgc:17197110070.098ENSHBUG00000020493zgc:1719719775.953Haplochromis_burtoni
ENSSDUG00000016019zgc:1719719237.879ENSHBUG00000012288polr3d9638.560Haplochromis_burtoni
ENSSDUG00000016019zgc:1719719640.587ENSHGLG00000015415POLR3D9840.587Heterocephalus_glaber_female
ENSSDUG00000016019zgc:1719719640.587ENSHGLG00100014950POLR3D9840.587Heterocephalus_glaber_male
ENSSDUG00000016019zgc:1719718642.033ENSHCOG00000002228polr3d9042.033Hippocampus_comes
ENSSDUG00000016019zgc:1719719956.000ENSHCOG00000018819-9954.750Hippocampus_comes
ENSSDUG00000016019zgc:1719719838.242ENSIPUG00000003480polr3d9940.426Ictalurus_punctatus
ENSSDUG00000016019zgc:1719719852.381ENSIPUG00000008608zgc:1719719752.632Ictalurus_punctatus
ENSSDUG00000016019zgc:1719719640.144ENSSTOG00000016519POLR3D9839.904Ictidomys_tridecemlineatus
ENSSDUG00000016019zgc:1719719639.423ENSJJAG00000006743Polr3d9839.320Jaculus_jaculus
ENSSDUG00000016019zgc:1719719839.518ENSKMAG00000005145polr3d10040.855Kryptolebias_marmoratus
ENSSDUG00000016019zgc:17197110075.309ENSLBEG00000009545zgc:17197110076.049Labrus_bergylta
ENSSDUG00000016019zgc:1719719837.981ENSLBEG00000003430polr3d10037.981Labrus_bergylta
ENSSDUG00000016019zgc:1719719741.727ENSLACG00000016654POLR3D9941.487Latimeria_chalumnae
ENSSDUG00000016019zgc:1719719040.816ENSLOCG00000016080polr3d9540.051Lepisosteus_oculatus
ENSSDUG00000016019zgc:1719719251.579ENSLOCG00000006467zgc:1719719750.877Lepisosteus_oculatus
ENSSDUG00000016019zgc:1719719640.573ENSLAFG00000001562POLR3D9840.482Loxodonta_africana
ENSSDUG00000016019zgc:1719719640.482ENSMFAG00000029141POLR3D9840.482Macaca_fascicularis
ENSSDUG00000016019zgc:1719719640.482ENSMMUG00000023226POLR3D9840.482Macaca_mulatta
ENSSDUG00000016019zgc:1719719640.482ENSMNEG00000039410POLR3D9840.482Macaca_nemestrina
ENSSDUG00000016019zgc:1719719640.482ENSMLEG00000031413POLR3D9840.482Mandrillus_leucophaeus
ENSSDUG00000016019zgc:1719719472.441ENSMAMG00000020617zgc:17197110072.525Mastacembelus_armatus
ENSSDUG00000016019zgc:1719719837.530ENSMAMG00000008914polr3d10039.474Mastacembelus_armatus
ENSSDUG00000016019zgc:1719719237.879ENSMZEG00005011442polr3d9638.560Maylandia_zebra
ENSSDUG00000016019zgc:17197110073.020ENSMZEG00005003175zgc:17197110074.752Maylandia_zebra
ENSSDUG00000016019zgc:1719719639.904ENSMAUG00000006844Polr3d9839.806Mesocricetus_auratus
ENSSDUG00000016019zgc:1719719740.952ENSMICG00000001049POLR3D9940.714Microcebus_murinus
ENSSDUG00000016019zgc:1719719640.291ENSMOCG00000005195Polr3d9840.534Microtus_ochrogaster
ENSSDUG00000016019zgc:1719718842.895ENSMMOG00000013845polr3d9143.432Mola_mola
ENSSDUG00000016019zgc:1719719040.827ENSMODG00000009491POLR3D9640.827Monodelphis_domestica
ENSSDUG00000016019zgc:17197110075.309ENSMALG00000005659zgc:17197110075.062Monopterus_albus
ENSSDUG00000016019zgc:1719719837.864ENSMALG00000002928polr3d9837.561Monopterus_albus
ENSSDUG00000016019zgc:1719719640.144MGP_CAROLIEiJ_G0019481Polr3d9840.144Mus_caroli
ENSSDUG00000016019zgc:1719719640.144ENSMUSG00000000776Polr3d9840.144Mus_musculus
ENSSDUG00000016019zgc:1719719637.055MGP_PahariEiJ_G0030498Polr3d9837.260Mus_pahari
ENSSDUG00000016019zgc:1719719640.385MGP_SPRETEiJ_G0020373Polr3d9840.385Mus_spretus
ENSSDUG00000016019zgc:1719719639.904ENSMPUG00000003653POLR3D9840.144Mustela_putorius_furo
ENSSDUG00000016019zgc:1719719639.857ENSMLUG00000002109POLR3D9839.857Myotis_lucifugus
ENSSDUG00000016019zgc:1719719239.401ENSNGAG00000013872Polr3d9440.458Nannospalax_galili
ENSSDUG00000016019zgc:1719718959.836ENSNBRG00000022951zgc:1719719261.749Neolamprologus_brichardi
ENSSDUG00000016019zgc:1719719238.619ENSNBRG00000019106polr3d9837.437Neolamprologus_brichardi
ENSSDUG00000016019zgc:1719719641.119ENSMEUG00000000465POLR3D9841.119Notamacropus_eugenii
ENSSDUG00000016019zgc:1719719241.103ENSOPRG00000013146POLR3D9441.353Ochotona_princeps
ENSSDUG00000016019zgc:1719719641.304ENSODEG00000005884POLR3D9841.546Octodon_degus
ENSSDUG00000016019zgc:17197110073.086ENSONIG00000007280zgc:17197110074.815Oreochromis_niloticus
ENSSDUG00000016019zgc:1719719237.879ENSONIG00000010634polr3d9638.560Oreochromis_niloticus
ENSSDUG00000016019zgc:1719718238.983ENSOANG00000010776POLR3D8540.678Ornithorhynchus_anatinus
ENSSDUG00000016019zgc:1719719640.625ENSOCUG00000017410POLR3D9840.777Oryctolagus_cuniculus
ENSSDUG00000016019zgc:1719719837.019ENSORLG00000011583polr3d10038.107Oryzias_latipes
ENSSDUG00000016019zgc:1719719837.081ENSORLG00020005668polr3d10038.164Oryzias_latipes_hni
ENSSDUG00000016019zgc:1719718837.166ENSORLG00015020291polr3d9037.838Oryzias_latipes_hsok
ENSSDUG00000016019zgc:1719718838.158ENSOMEG00000010120polr3d10037.923Oryzias_melastigma
ENSSDUG00000016019zgc:1719719639.759ENSOGAG00000004912POLR3D9840.000Otolemur_garnettii
ENSSDUG00000016019zgc:1719716931.338ENSOARG00000009142-9831.338Ovis_aries
ENSSDUG00000016019zgc:1719719739.423ENSOARG00000010372-7939.423Ovis_aries
ENSSDUG00000016019zgc:1719719640.385ENSPPAG00000029591POLR3D9840.385Pan_paniscus
ENSSDUG00000016019zgc:1719719640.144ENSPPRG00000022827POLR3D9840.385Panthera_pardus
ENSSDUG00000016019zgc:1719719640.625ENSPTIG00000018239POLR3D9840.865Panthera_tigris_altaica
ENSSDUG00000016019zgc:1719719640.385ENSPTRG00000020056POLR3D9840.385Pan_troglodytes
ENSSDUG00000016019zgc:1719719640.482ENSPANG00000009440POLR3D9840.482Papio_anubis
ENSSDUG00000016019zgc:1719719338.821ENSPKIG00000006727polr3d9739.506Paramormyrops_kingsleyae
ENSSDUG00000016019zgc:1719719854.975ENSPKIG00000025283zgc:1719719754.726Paramormyrops_kingsleyae
ENSSDUG00000016019zgc:1719719537.923ENSPSIG00000006113POLR3D9936.715Pelodiscus_sinensis
ENSSDUG00000016019zgc:1719719840.988ENSPMGG00000021658polr3d10040.594Periophthalmus_magnuspinnatus
ENSSDUG00000016019zgc:1719719640.288ENSPEMG00000023314Polr3d9840.678Peromyscus_maniculatus_bairdii
ENSSDUG00000016019zgc:1719718737.984ENSPMAG00000001455polr3d9139.130Petromyzon_marinus
ENSSDUG00000016019zgc:1719719640.964ENSPCIG00000012699POLR3D9840.964Phascolarctos_cinereus
ENSSDUG00000016019zgc:1719719960.750ENSPFOG00000011089zgc:1719719960.500Poecilia_formosa
ENSSDUG00000016019zgc:1719719738.386ENSPFOG00000012698polr3d9939.120Poecilia_formosa
ENSSDUG00000016019zgc:1719719951.244ENSPLAG00000003645zgc:1719719950.995Poecilia_latipinna
ENSSDUG00000016019zgc:1719719738.142ENSPLAG00000008149polr3d9938.875Poecilia_latipinna
ENSSDUG00000016019zgc:1719719960.250ENSPMEG00000016953zgc:1719719960.000Poecilia_mexicana
ENSSDUG00000016019zgc:1719719737.805ENSPMEG00000002702polr3d9939.024Poecilia_mexicana
ENSSDUG00000016019zgc:1719719138.342ENSPREG00000007593polr3d9539.119Poecilia_reticulata
ENSSDUG00000016019zgc:1719719958.500ENSPREG00000003755-9958.250Poecilia_reticulata
ENSSDUG00000016019zgc:1719719640.144ENSPPYG00000018419POLR3D9840.291Pongo_abelii
ENSSDUG00000016019zgc:1719719538.107ENSPCAG00000001971POLR3D9738.350Procavia_capensis
ENSSDUG00000016019zgc:1719719640.385ENSPCOG00000028134POLR3D9840.144Propithecus_coquereli
ENSSDUG00000016019zgc:1719719640.291ENSPVAG00000009873POLR3D9840.291Pteropus_vampyrus
ENSSDUG00000016019zgc:1719718967.403ENSPNYG00000008902zgc:1719718969.337Pundamilia_nyererei
ENSSDUG00000016019zgc:1719719237.626ENSPNYG00000016306polr3d9638.303Pundamilia_nyererei
ENSSDUG00000016019zgc:1719719156.216ENSPNAG00000018934zgc:1719719156.216Pygocentrus_nattereri
ENSSDUG00000016019zgc:1719718739.894ENSPNAG00000022324polr3d9539.949Pygocentrus_nattereri
ENSSDUG00000016019zgc:1719719639.663ENSRNOG00000010028Polr3d9840.049Rattus_norvegicus
ENSSDUG00000016019zgc:1719719640.241ENSRBIG00000035406POLR3D9840.241Rhinopithecus_bieti
ENSSDUG00000016019zgc:1719719640.241ENSRROG00000037278POLR3D9840.241Rhinopithecus_roxellana
ENSSDUG00000016019zgc:1719719640.385ENSSBOG00000024956POLR3D9840.385Saimiri_boliviensis_boliviensis
ENSSDUG00000016019zgc:1719718241.143ENSSHAG00000018257POLR3D9941.714Sarcophilus_harrisii
ENSSDUG00000016019zgc:1719718938.182ENSSFOG00015010611polr3d9138.701Scleropages_formosus
ENSSDUG00000016019zgc:1719718254.006ENSSFOG00015011547zgc:1719719154.328Scleropages_formosus
ENSSDUG00000016019zgc:1719719977.667ENSSMAG00000001465zgc:1719719976.923Scophthalmus_maximus
ENSSDUG00000016019zgc:1719718739.572ENSSMAG00000006271polr3d9039.353Scophthalmus_maximus
ENSSDUG00000016019zgc:1719719839.952ENSSLDG00000009643polr3d9840.876Seriola_lalandi_dorsalis
ENSSDUG00000016019zgc:17197110099.257ENSSLDG00000015968zgc:17197110099.257Seriola_lalandi_dorsalis
ENSSDUG00000016019zgc:1719719638.462ENSSARG00000012844POLR3D9838.462Sorex_araneus
ENSSDUG00000016019zgc:1719719241.414ENSSPUG00000000719POLR3D9540.152Sphenodon_punctatus
ENSSDUG00000016019zgc:17197110066.256ENSSPAG00000010384zgc:1719719776.487Stegastes_partitus
ENSSDUG00000016019zgc:1719719837.264ENSSPAG00000023326polr3d10038.702Stegastes_partitus
ENSSDUG00000016019zgc:1719719640.049ENSSSCG00000009622POLR3D9840.534Sus_scrofa
ENSSDUG00000016019zgc:1719719540.250ENSTRUG00000003555polr3d9940.500Takifugu_rubripes
ENSSDUG00000016019zgc:1719719838.443ENSTNIG00000006282polr3d10037.470Tetraodon_nigroviridis
ENSSDUG00000016019zgc:1719719640.385ENSTTRG00000012745POLR3D9840.534Tursiops_truncatus
ENSSDUG00000016019zgc:1719718837.795ENSUAMG00000026868POLR3D9738.196Ursus_americanus
ENSSDUG00000016019zgc:1719719640.144ENSUMAG00000005099POLR3D9840.534Ursus_maritimus
ENSSDUG00000016019zgc:1719719640.144ENSVVUG00000005290POLR3D9840.144Vulpes_vulpes
ENSSDUG00000016019zgc:1719719438.575ENSXETG00000010534polr3d9739.066Xenopus_tropicalis
ENSSDUG00000016019zgc:1719719738.346ENSXCOG00000015872polr3d9939.447Xiphophorus_couchianus
ENSSDUG00000016019zgc:1719719737.897ENSXMAG00000001872polr3d9938.142Xiphophorus_maculatus
ENSSDUG00000016019zgc:1719719959.000ENSXMAG00000014555-9959.352Xiphophorus_maculatus

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