EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016022 (Gene tree)
Gene ID: 111234161
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 27686 bases
Position: chrBDQW01000442.1:80819-108504
Accession: 111234161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022023	zf-CCCH	PF00642.24	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022430	-	8294	XM_022762107	ENSSDUP00000022023	1155 (aa)	XP_022617828	UPI000BBE672F

Gene Model

Click here to download ENSSDUG00000016022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016022	rc3h2	93	56.830	ENSG00000056586	RC3H2	95	86.947	Homo_sapiens
ENSSDUG00000016022	rc3h2	100	94.036	ENSAPOG00000002117	rc3h2	100	94.123	Acanthochromis_polyacanthus
ENSSDUG00000016022	rc3h2	93	57.005	ENSAMEG00000006498	RC3H2	92	56.868	Ailuropoda_melanoleuca
ENSSDUG00000016022	rc3h2	100	94.118	ENSAPEG00000007757	rc3h2	100	94.204	Amphiprion_percula
ENSSDUG00000016022	rc3h2	100	91.789	ENSATEG00000019414	rc3h2	100	91.789	Anabas_testudineus
ENSSDUG00000016022	rc3h2	93	58.011	ENSAPLG00000013920	RC3H2	92	57.872	Anas_platyrhynchos
ENSSDUG00000016022	rc3h2	93	56.655	ENSANAG00000030862	RC3H2	95	86.947	Aotus_nancymaae
ENSSDUG00000016022	rc3h2	100	87.767	ENSACLG00000023136	rc3h2	100	87.767	Astatotilapia_calliptera
ENSSDUG00000016022	rc3h2	100	61.407	ENSAMXG00000006778	rc3h2	100	68.220	Astyanax_mexicanus
ENSSDUG00000016022	rc3h2	93	56.804	ENSBTAG00000023867	RC3H2	92	56.667	Bos_taurus
ENSSDUG00000016022	rc3h2	93	56.655	ENSCJAG00000020050	RC3H2	95	86.947	Callithrix_jacchus
ENSSDUG00000016022	rc3h2	93	56.930	ENSCAFG00020015288	RC3H2	95	86.947	Canis_lupus_dingo
ENSSDUG00000016022	rc3h2	93	56.804	ENSCHIG00000019319	RC3H2	92	56.667	Capra_hircus
ENSSDUG00000016022	rc3h2	84	50.685	ENSCAPG00000017086	RC3H2	93	50.195	Cavia_aperea
ENSSDUG00000016022	rc3h2	93	57.155	ENSCPOG00000008511	RC3H2	92	56.930	Cavia_porcellus
ENSSDUG00000016022	rc3h2	93	56.930	ENSCCAG00000001404	RC3H2	95	86.947	Cebus_capucinus
ENSSDUG00000016022	rc3h2	93	56.655	ENSCATG00000036655	RC3H2	95	86.947	Cercocebus_atys
ENSSDUG00000016022	rc3h2	93	57.155	ENSCLAG00000013261	RC3H2	92	56.930	Chinchilla_lanigera
ENSSDUG00000016022	rc3h2	81	53.998	ENSCSAG00000013416	RC3H2	91	53.846	Chlorocebus_sabaeus
ENSSDUG00000016022	rc3h2	93	57.533	ENSCPBG00000009811	RC3H2	92	57.482	Chrysemys_picta_bellii
ENSSDUG00000016022	rc3h2	93	56.655	ENSCANG00000043140	RC3H2	95	86.947	Colobus_angolensis_palliatus
ENSSDUG00000016022	rc3h2	93	56.830	ENSCGRG00001010006	Rc3h2	92	56.693	Cricetulus_griseus_chok1gshd
ENSSDUG00000016022	rc3h2	83	62.867	ENSCGRG00000009255	Rc3h2	91	62.911	Cricetulus_griseus_crigri
ENSSDUG00000016022	rc3h2	100	85.312	ENSCSEG00000017460	rc3h2	100	85.226	Cynoglossus_semilaevis
ENSSDUG00000016022	rc3h2	99	80.899	ENSCVAG00000012202	rc3h2	100	80.294	Cyprinodon_variegatus
ENSSDUG00000016022	rc3h2	100	62.230	ENSDARG00000063050	rc3h2	100	62.849	Danio_rerio
ENSSDUG00000016022	rc3h2	92	57.270	ENSDNOG00000014557	RC3H2	91	57.130	Dasypus_novemcinctus
ENSSDUG00000016022	rc3h2	93	57.268	ENSDORG00000006398	Rc3h2	92	57.043	Dipodomys_ordii
ENSSDUG00000016022	rc3h2	93	56.616	ENSEASG00005020897	RC3H2	99	78.750	Equus_asinus_asinus
ENSSDUG00000016022	rc3h2	93	57.018	ENSECAG00000022176	RC3H2	92	56.880	Equus_caballus
ENSSDUG00000016022	rc3h2	100	72.455	ENSELUG00000006105	rc3h2	100	72.541	Esox_lucius
ENSSDUG00000016022	rc3h2	93	57.105	ENSFCAG00000007375	RC3H2	92	56.968	Felis_catus
ENSSDUG00000016022	rc3h2	93	57.655	ENSFALG00000002011	RC3H2	92	57.743	Ficedula_albicollis
ENSSDUG00000016022	rc3h2	93	57.155	ENSFDAG00000012477	RC3H2	92	56.930	Fukomys_damarensis
ENSSDUG00000016022	rc3h2	99	81.708	ENSFHEG00000012272	rc3h2	100	81.331	Fundulus_heteroclitus
ENSSDUG00000016022	rc3h2	68	69.914	ENSGMOG00000016709	-	99	70.297	Gadus_morhua
ENSSDUG00000016022	rc3h2	93	57.780	ENSGALG00000001253	RC3H2	92	57.867	Gallus_gallus
ENSSDUG00000016022	rc3h2	96	82.088	ENSGAFG00000007679	rc3h2	100	81.638	Gambusia_affinis
ENSSDUG00000016022	rc3h2	74	84.235	ENSGACG00000017369	rc3h2	100	97.285	Gasterosteus_aculeatus
ENSSDUG00000016022	rc3h2	93	57.821	ENSGAGG00000018295	RC3H2	98	58.192	Gopherus_agassizii
ENSSDUG00000016022	rc3h2	92	56.991	ENSGGOG00000017062	RC3H2	95	86.947	Gorilla_gorilla
ENSSDUG00000016022	rc3h2	100	89.100	ENSHBUG00000003976	rc3h2	100	89.100	Haplochromis_burtoni
ENSSDUG00000016022	rc3h2	93	57.243	ENSHGLG00100018015	RC3H2	92	57.018	Heterocephalus_glaber_male
ENSSDUG00000016022	rc3h2	100	76.300	ENSHCOG00000003006	rc3h2	100	75.000	Hippocampus_comes
ENSSDUG00000016022	rc3h2	100	59.587	ENSIPUG00000021433	rc3h2	100	59.469	Ictalurus_punctatus
ENSSDUG00000016022	rc3h2	93	57.155	ENSSTOG00000010655	RC3H2	92	56.930	Ictidomys_tridecemlineatus
ENSSDUG00000016022	rc3h2	93	57.419	ENSJJAG00000022376	Rc3h2	92	57.193	Jaculus_jaculus
ENSSDUG00000016022	rc3h2	100	83.838	ENSKMAG00000010936	rc3h2	100	83.751	Kryptolebias_marmoratus
ENSSDUG00000016022	rc3h2	99	57.686	ENSLOCG00000002894	rc3h2	100	57.517	Lepisosteus_oculatus
ENSSDUG00000016022	rc3h2	92	57.422	ENSLAFG00000003521	RC3H2	91	57.282	Loxodonta_africana
ENSSDUG00000016022	rc3h2	83	87.330	ENSMFAG00000035621	RC3H2	95	86.947	Macaca_fascicularis
ENSSDUG00000016022	rc3h2	93	56.754	ENSMMUG00000021134	RC3H2	95	86.947	Macaca_mulatta
ENSSDUG00000016022	rc3h2	93	56.655	ENSMNEG00000031599	RC3H2	95	84.735	Macaca_nemestrina
ENSSDUG00000016022	rc3h2	93	56.754	ENSMLEG00000033809	RC3H2	95	86.947	Mandrillus_leucophaeus
ENSSDUG00000016022	rc3h2	100	89.014	ENSMZEG00005017019	rc3h2	100	89.014	Maylandia_zebra
ENSSDUG00000016022	rc3h2	93	57.679	ENSMGAG00000007984	RC3H2	92	57.853	Meleagris_gallopavo
ENSSDUG00000016022	rc3h2	73	62.338	ENSMAUG00000003117	Rc3h2	84	62.338	Mesocricetus_auratus
ENSSDUG00000016022	rc3h2	93	56.629	ENSMICG00000003227	RC3H2	95	86.726	Microcebus_murinus
ENSSDUG00000016022	rc3h2	93	56.780	ENSMOCG00000009592	Rc3h2	92	56.556	Microtus_ochrogaster
ENSSDUG00000016022	rc3h2	84	95.541	ENSMMOG00000021305	rc3h2	99	89.961	Mola_mola
ENSSDUG00000016022	rc3h2	93	58.019	ENSMODG00000019725	RC3H2	77	57.706	Monodelphis_domestica
ENSSDUG00000016022	rc3h2	93	57.772	MGP_CAROLIEiJ_G0023516	Rc3h2	95	87.168	Mus_caroli
ENSSDUG00000016022	rc3h2	93	57.093	ENSMUSG00000075376	Rc3h2	95	87.168	Mus_musculus
ENSSDUG00000016022	rc3h2	93	57.180	MGP_PahariEiJ_G0024969	Rc3h2	95	87.168	Mus_pahari
ENSSDUG00000016022	rc3h2	93	57.093	MGP_SPRETEiJ_G0024436	Rc3h2	95	87.168	Mus_spretus
ENSSDUG00000016022	rc3h2	93	57.105	ENSMPUG00000014141	RC3H2	92	57.055	Mustela_putorius_furo
ENSSDUG00000016022	rc3h2	93	57.155	ENSMLUG00000013992	RC3H2	92	57.105	Myotis_lucifugus
ENSSDUG00000016022	rc3h2	100	89.014	ENSNBRG00000009276	rc3h2	100	89.014	Neolamprologus_brichardi
ENSSDUG00000016022	rc3h2	92	56.625	ENSNLEG00000017204	RC3H2	95	86.947	Nomascus_leucogenys
ENSSDUG00000016022	rc3h2	54	86.957	ENSMEUG00000001299	-	56	86.957	Notamacropus_eugenii
ENSSDUG00000016022	rc3h2	67	57.478	ENSOPRG00000000135	RC3H2	74	57.531	Ochotona_princeps
ENSSDUG00000016022	rc3h2	100	88.195	ENSONIG00000003945	rc3h2	100	88.195	Oreochromis_niloticus
ENSSDUG00000016022	rc3h2	91	57.857	ENSOANG00000008194	RC3H2	99	57.806	Ornithorhynchus_anatinus
ENSSDUG00000016022	rc3h2	93	56.980	ENSOCUG00000008804	RC3H2	92	56.842	Oryctolagus_cuniculus
ENSSDUG00000016022	rc3h2	100	83.420	ENSORLG00000010018	rc3h2	100	83.333	Oryzias_latipes
ENSSDUG00000016022	rc3h2	100	83.333	ENSORLG00020013257	rc3h2	100	83.247	Oryzias_latipes_hni
ENSSDUG00000016022	rc3h2	100	83.592	ENSORLG00015001525	rc3h2	100	83.506	Oryzias_latipes_hsok
ENSSDUG00000016022	rc3h2	100	85.073	ENSOMEG00000023540	rc3h2	100	84.987	Oryzias_melastigma
ENSSDUG00000016022	rc3h2	93	56.918	ENSOGAG00000010678	RC3H2	92	56.780	Otolemur_garnettii
ENSSDUG00000016022	rc3h2	93	57.055	ENSOARG00000013965	RC3H2	92	56.918	Ovis_aries
ENSSDUG00000016022	rc3h2	93	56.655	ENSPPAG00000036013	RC3H2	95	86.947	Pan_paniscus
ENSSDUG00000016022	rc3h2	93	57.005	ENSPPRG00000008698	RC3H2	97	58.449	Panthera_pardus
ENSSDUG00000016022	rc3h2	93	57.005	ENSPTIG00000014257	RC3H2	97	58.449	Panthera_tigris_altaica
ENSSDUG00000016022	rc3h2	93	56.655	ENSPTRG00000021339	RC3H2	95	86.947	Pan_troglodytes
ENSSDUG00000016022	rc3h2	93	55.254	ENSPANG00000025840	RC3H2	94	83.407	Papio_anubis
ENSSDUG00000016022	rc3h2	99	66.149	ENSPKIG00000021910	rc3h2	96	65.805	Paramormyrops_kingsleyae
ENSSDUG00000016022	rc3h2	93	58.070	ENSPSIG00000005393	RC3H2	92	58.019	Pelodiscus_sinensis
ENSSDUG00000016022	rc3h2	85	95.034	ENSPMGG00000023963	rc3h2	95	95.034	Periophthalmus_magnuspinnatus
ENSSDUG00000016022	rc3h2	93	56.993	ENSPEMG00000023441	Rc3h2	92	56.769	Peromyscus_maniculatus_bairdii
ENSSDUG00000016022	rc3h2	82	87.557	ENSPCIG00000025559	RC3H2	90	87.557	Phascolarctos_cinereus
ENSSDUG00000016022	rc3h2	97	81.134	ENSPFOG00000019699	rc3h2	100	79.087	Poecilia_formosa
ENSSDUG00000016022	rc3h2	91	72.159	ENSPLAG00000005799	rc3h2	97	71.686	Poecilia_latipinna
ENSSDUG00000016022	rc3h2	97	81.488	ENSPMEG00000014187	rc3h2	97	81.289	Poecilia_mexicana
ENSSDUG00000016022	rc3h2	99	81.417	ENSPREG00000008979	rc3h2	100	80.899	Poecilia_reticulata
ENSSDUG00000016022	rc3h2	78	74.308	ENSPCAG00000010154	RC3H2	77	74.308	Procavia_capensis
ENSSDUG00000016022	rc3h2	100	88.024	ENSPNYG00000012063	rc3h2	100	88.024	Pundamilia_nyererei
ENSSDUG00000016022	rc3h2	100	63.333	ENSPNAG00000017502	rc3h2	100	63.373	Pygocentrus_nattereri
ENSSDUG00000016022	rc3h2	93	57.005	ENSRNOG00000009196	Rc3h2	95	56.780	Rattus_norvegicus
ENSSDUG00000016022	rc3h2	93	56.930	ENSRBIG00000032579	RC3H2	95	86.947	Rhinopithecus_bieti
ENSSDUG00000016022	rc3h2	93	56.842	ENSRROG00000043784	RC3H2	95	86.947	Rhinopithecus_roxellana
ENSSDUG00000016022	rc3h2	93	56.507	ENSSBOG00000029100	RC3H2	95	86.947	Saimiri_boliviensis_boliviensis
ENSSDUG00000016022	rc3h2	92	58.090	ENSSHAG00000007498	RC3H2	91	57.951	Sarcophilus_harrisii
ENSSDUG00000016022	rc3h2	100	92.241	ENSSMAG00000020048	rc3h2	100	92.241	Scophthalmus_maximus
ENSSDUG00000016022	rc3h2	100	99.567	ENSSLDG00000016070	rc3h2	100	99.567	Seriola_lalandi_dorsalis
ENSSDUG00000016022	rc3h2	93	56.769	ENSSARG00000012329	RC3H2	92	56.495	Sorex_araneus
ENSSDUG00000016022	rc3h2	93	57.430	ENSSPUG00000001457	RC3H2	92	57.467	Sphenodon_punctatus
ENSSDUG00000016022	rc3h2	100	95.069	ENSSPAG00000005233	rc3h2	100	95.069	Stegastes_partitus
ENSSDUG00000016022	rc3h2	93	56.968	ENSSSCG00000005575	RC3H2	93	86.726	Sus_scrofa
ENSSDUG00000016022	rc3h2	93	57.655	ENSTGUG00000006889	-	92	57.743	Taeniopygia_guttata
ENSSDUG00000016022	rc3h2	85	75.377	ENSTNIG00000004942	rc3h2	98	75.102	Tetraodon_nigroviridis
ENSSDUG00000016022	rc3h2	71	62.766	ENSTBEG00000009622	RC3H2	79	62.928	Tupaia_belangeri
ENSSDUG00000016022	rc3h2	87	67.228	ENSTTRG00000016954	RC3H2	85	67.270	Tursiops_truncatus
ENSSDUG00000016022	rc3h2	93	57.105	ENSUAMG00000015355	RC3H2	92	56.968	Ursus_americanus
ENSSDUG00000016022	rc3h2	93	57.105	ENSUMAG00000003161	RC3H2	95	86.947	Ursus_maritimus
ENSSDUG00000016022	rc3h2	93	56.792	ENSVPAG00000005994	RC3H2	92	56.655	Vicugna_pacos
ENSSDUG00000016022	rc3h2	93	56.930	ENSVVUG00000009519	RC3H2	95	56.792	Vulpes_vulpes
ENSSDUG00000016022	rc3h2	99	68.359	ENSXCOG00000005002	rc3h2	94	97.052	Xiphophorus_couchianus
ENSSDUG00000016022	rc3h2	99	82.022	ENSXMAG00000001724	rc3h2	100	81.558	Xiphophorus_maculatus