EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016099 (Gene tree)
Gene ID: -
Gene Symbol: cirbpa
Alias: cirbp|wu:fb12c11|wu:fi20g12|zgc:136559
Full Name: cold inducible RNA binding protein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1150 bases
Position: chrBDQW01000226.1:5187270-5188419
Accession: 111228788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022130	RRM_1	PF00076.22	3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022537	-	486	XM_022754825	ENSSDUP00000022130	161 (aa)	XP_022610546	-

Gene Model

Click here to download ENSSDUG00000016099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016099	cirbpa	100	70.718	ENSACIG00000016116	cirbpa	100	77.273	Amphilophus_citrinellus
ENSSDUG00000016099	cirbpa	100	70.492	ENSATEG00000014985	cirbpa	100	71.038	Anabas_testudineus
ENSSDUG00000016099	cirbpa	100	69.061	ENSACLG00000002094	-	100	75.568	Astatotilapia_calliptera
ENSSDUG00000016099	cirbpa	57	95.652	ENSCSEG00000014344	cirbpa	100	60.000	Cynoglossus_semilaevis
ENSSDUG00000016099	cirbpa	100	64.324	ENSCVAG00000004853	cirbpa	100	64.865	Cyprinodon_variegatus
ENSSDUG00000016099	cirbpa	99	70.833	ENSFHEG00000002580	cirbpa	100	74.699	Fundulus_heteroclitus
ENSSDUG00000016099	cirbpa	99	44.670	ENSGMOG00000007179	cirbpb	98	45.000	Gadus_morhua
ENSSDUG00000016099	cirbpa	100	59.184	ENSGAFG00000008654	cirbpa	100	60.541	Gambusia_affinis
ENSSDUG00000016099	cirbpa	100	55.497	ENSGACG00000015206	cirbpa	100	54.211	Gasterosteus_aculeatus
ENSSDUG00000016099	cirbpa	75	56.198	ENSHCOG00000001170	cirbpa	100	55.901	Hippocampus_comes
ENSSDUG00000016099	cirbpa	77	76.056	ENSIPUG00000000698	cirbpb	100	53.234	Ictalurus_punctatus
ENSSDUG00000016099	cirbpa	100	66.286	ENSKMAG00000005905	cirbpa	100	67.429	Kryptolebias_marmoratus
ENSSDUG00000016099	cirbpa	100	57.471	ENSLBEG00000000292	cirbpa	100	55.738	Labrus_bergylta
ENSSDUG00000016099	cirbpa	100	70.330	ENSMAMG00000010168	cirbpa	100	71.978	Mastacembelus_armatus
ENSSDUG00000016099	cirbpa	50	86.250	ENSMMOG00000010696	cirbpa	99	84.337	Mola_mola
ENSSDUG00000016099	cirbpa	100	68.132	ENSMALG00000020092	cirbpa	99	71.910	Monopterus_albus
ENSSDUG00000016099	cirbpa	100	69.613	ENSONIG00000010169	cirbpa	100	76.136	Oreochromis_niloticus
ENSSDUG00000016099	cirbpa	100	70.115	ENSORLG00000015433	cirbpa	100	74.138	Oryzias_latipes
ENSSDUG00000016099	cirbpa	100	70.115	ENSORLG00020016909	cirbpa	100	74.138	Oryzias_latipes_hni
ENSSDUG00000016099	cirbpa	100	70.115	ENSORLG00015016636	cirbpa	100	74.138	Oryzias_latipes_hsok
ENSSDUG00000016099	cirbpa	100	73.410	ENSOMEG00000021469	cirbpa	73	75.723	Oryzias_melastigma
ENSSDUG00000016099	cirbpa	100	63.131	ENSPFOG00000015653	cirbpa	100	65.027	Poecilia_formosa
ENSSDUG00000016099	cirbpa	99	63.265	ENSPLAG00000011125	cirbpa	100	65.027	Poecilia_latipinna
ENSSDUG00000016099	cirbpa	100	63.452	ENSPMEG00000013878	cirbpa	100	65.027	Poecilia_mexicana
ENSSDUG00000016099	cirbpa	99	68.394	ENSPREG00000018042	cirbpa	98	69.780	Poecilia_reticulata
ENSSDUG00000016099	cirbpa	100	56.566	ENSSMAG00000002412	cirbpa	100	50.739	Scophthalmus_maximus
ENSSDUG00000016099	cirbpa	100	61.364	ENSSPAG00000023037	cirbpa	99	60.795	Stegastes_partitus
ENSSDUG00000016099	cirbpa	100	60.989	ENSTRUG00000010187	cirbpa	100	66.082	Takifugu_rubripes
ENSSDUG00000016099	cirbpa	100	58.163	ENSTNIG00000000450	cirbpa	100	67.403	Tetraodon_nigroviridis
ENSSDUG00000016099	cirbpa	99	68.394	ENSXCOG00000008262	cirbpa	90	94.366	Xiphophorus_couchianus
ENSSDUG00000016099	cirbpa	100	67.526	ENSXMAG00000019336	cirbpa	100	70.492	Xiphophorus_maculatus