EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016161 (Gene tree)
Gene ID: 111223947
Gene Symbol: POC1A
Alias: DKFZP434C245|WDR51A
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 43889 bases
Position: chrBDQW01000121.1:1484025-1527913
Accession: 111223947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022205	eIF2A	PF08662.11	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022612	POC1A-201	4498	XM_022748258	ENSSDUP00000022205	468 (aa)	XP_022603979	-

Gene Model

Click here to download ENSSDUG00000016161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016161	POC1A	61	30.252	ENSSDUG00000003299	prpf19	54	30.252
ENSSDUG00000016161	POC1A	63	30.795	ENSSDUG00000019036	-	89	30.795
ENSSDUG00000016161	POC1A	64	34.896	ENSSDUG00000023475	wdr61	89	34.896
ENSSDUG00000016161	POC1A	65	31.353	ENSSDUG00000020022	wdr5	99	33.197

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016161	POC1A	97	59.121	ENSG00000164087	POC1A	96	74.688	Homo_sapiens
ENSSDUG00000016161	POC1A	99	93.506	ENSAPOG00000002677	POC1A	98	93.506	Acanthochromis_polyacanthus
ENSSDUG00000016161	POC1A	98	70.857	ENSAMEG00000009136	POC1A	83	71.098	Ailuropoda_melanoleuca
ENSSDUG00000016161	POC1A	100	77.872	ENSACIG00000018288	poc1a	100	77.754	Amphilophus_citrinellus
ENSSDUG00000016161	POC1A	99	92.754	ENSAOCG00000001066	POC1A	99	92.754	Amphiprion_ocellaris
ENSSDUG00000016161	POC1A	72	100.000	ENSAPEG00000005795	poc1a	99	100.000	Amphiprion_percula
ENSSDUG00000016161	POC1A	97	65.859	ENSAPLG00000007756	POC1A	98	62.115	Anas_platyrhynchos
ENSSDUG00000016161	POC1A	97	71.865	ENSANAG00000030897	POC1A	97	71.865	Aotus_nancymaae
ENSSDUG00000016161	POC1A	100	88.559	ENSACLG00000017869	POC1A	100	92.442	Astatotilapia_calliptera
ENSSDUG00000016161	POC1A	64	80.667	ENSAMXG00000024703	poc1a	85	80.667	Astyanax_mexicanus
ENSSDUG00000016161	POC1A	97	78.276	ENSBTAG00000001471	POC1A	94	78.276	Bos_taurus
ENSSDUG00000016161	POC1A	97	73.438	ENSCJAG00000005972	POC1A	96	73.438	Callithrix_jacchus
ENSSDUG00000016161	POC1A	97	53.846	ENSCAFG00020022379	POC1A	97	69.841	Canis_lupus_dingo
ENSSDUG00000016161	POC1A	97	63.717	ENSCHIG00000002571	POC1A	97	64.159	Capra_hircus
ENSSDUG00000016161	POC1A	97	59.170	ENSTSYG00000008302	POC1A	96	74.923	Carlito_syrichta
ENSSDUG00000016161	POC1A	91	76.866	ENSCAPG00000016201	POC1A	70	76.866	Cavia_aperea
ENSSDUG00000016161	POC1A	74	88.462	ENSCPOG00000006740	POC1A	96	88.462	Cavia_porcellus
ENSSDUG00000016161	POC1A	97	72.171	ENSCCAG00000023380	POC1A	97	72.171	Cebus_capucinus
ENSSDUG00000016161	POC1A	97	77.241	ENSCATG00000021822	POC1A	93	77.241	Cercocebus_atys
ENSSDUG00000016161	POC1A	98	67.925	ENSCLAG00000010593	POC1A	96	88.462	Chinchilla_lanigera
ENSSDUG00000016161	POC1A	95	62.470	ENSCSAG00000013862	POC1A	79	73.559	Chlorocebus_sabaeus
ENSSDUG00000016161	POC1A	58	82.353	ENSCPBG00000016728	POC1A	98	82.353	Chrysemys_picta_bellii
ENSSDUG00000016161	POC1A	95	53.226	ENSCSAVG00000008477	-	85	73.022	Ciona_savignyi
ENSSDUG00000016161	POC1A	95	62.708	ENSCANG00000033064	POC1A	96	72.892	Colobus_angolensis_palliatus
ENSSDUG00000016161	POC1A	98	72.566	ENSCGRG00001007357	Poc1a	98	72.566	Cricetulus_griseus_chok1gshd
ENSSDUG00000016161	POC1A	98	88.581	ENSCSEG00000010287	POC1A	96	88.581	Cynoglossus_semilaevis
ENSSDUG00000016161	POC1A	100	78.769	ENSCVAG00000015594	POC1A	100	78.556	Cyprinodon_variegatus
ENSSDUG00000016161	POC1A	97	54.545	ENSEBUG00000002614	POC1A	93	53.911	Eptatretus_burgeri
ENSSDUG00000016161	POC1A	63	62.162	ENSEBUG00000008013	poc1a	85	62.162	Eptatretus_burgeri
ENSSDUG00000016161	POC1A	73	83.117	ENSELUG00000015504	poc1a	96	76.331	Esox_lucius
ENSSDUG00000016161	POC1A	74	88.462	ENSFCAG00000015704	POC1A	94	88.462	Felis_catus
ENSSDUG00000016161	POC1A	97	65.708	ENSFALG00000008922	POC1A	97	60.841	Ficedula_albicollis
ENSSDUG00000016161	POC1A	97	75.641	ENSFDAG00000011606	POC1A	95	88.462	Fukomys_damarensis
ENSSDUG00000016161	POC1A	100	80.127	ENSFHEG00000015504	POC1A	100	79.704	Fundulus_heteroclitus
ENSSDUG00000016161	POC1A	99	63.283	ENSGALG00000034572	-	93	70.739	Gallus_gallus
ENSSDUG00000016161	POC1A	99	74.353	ENSGACG00000007015	poc1a	99	74.138	Gasterosteus_aculeatus
ENSSDUG00000016161	POC1A	97	64.912	ENSGAGG00000014637	POC1A	98	65.132	Gopherus_agassizii
ENSSDUG00000016161	POC1A	97	59.121	ENSGGOG00000006652	POC1A	96	75.962	Gorilla_gorilla
ENSSDUG00000016161	POC1A	74	88.462	ENSHGLG00000013436	POC1A	96	88.462	Heterocephalus_glaber_female
ENSSDUG00000016161	POC1A	97	57.582	ENSHGLG00100003479	POC1A	85	70.231	Heterocephalus_glaber_male
ENSSDUG00000016161	POC1A	99	78.276	ENSIPUG00000001227	POC1A	94	77.816	Ictalurus_punctatus
ENSSDUG00000016161	POC1A	97	62.882	ENSSTOG00000002638	POC1A	98	71.893	Ictidomys_tridecemlineatus
ENSSDUG00000016161	POC1A	97	77.152	ENSJJAG00000018739	Poc1a	92	84.615	Jaculus_jaculus
ENSSDUG00000016161	POC1A	99	86.752	ENSLBEG00000016119	POC1A	100	86.752	Labrus_bergylta
ENSSDUG00000016161	POC1A	99	65.591	ENSLACG00000018788	POC1A	90	79.167	Latimeria_chalumnae
ENSSDUG00000016161	POC1A	99	70.259	ENSLOCG00000013801	poc1a	99	68.750	Lepisosteus_oculatus
ENSSDUG00000016161	POC1A	98	54.584	ENSLAFG00000028434	POC1A	99	73.579	Loxodonta_africana
ENSSDUG00000016161	POC1A	95	62.233	ENSMFAG00000001970	POC1A	79	73.220	Macaca_fascicularis
ENSSDUG00000016161	POC1A	97	63.274	ENSMMUG00000012485	POC1A	79	73.620	Macaca_mulatta
ENSSDUG00000016161	POC1A	95	62.233	ENSMNEG00000042811	POC1A	79	73.220	Macaca_nemestrina
ENSSDUG00000016161	POC1A	97	72.289	ENSMLEG00000039574	POC1A	96	72.289	Mandrillus_leucophaeus
ENSSDUG00000016161	POC1A	97	89.593	ENSMAMG00000014233	POC1A	99	88.688	Mastacembelus_armatus
ENSSDUG00000016161	POC1A	100	88.559	ENSMZEG00005013503	POC1A	100	88.559	Maylandia_zebra
ENSSDUG00000016161	POC1A	98	62.208	ENSMGAG00000001628	POC1A	98	60.417	Meleagris_gallopavo
ENSSDUG00000016161	POC1A	97	74.390	ENSMAUG00000017403	Poc1a	98	73.860	Mesocricetus_auratus
ENSSDUG00000016161	POC1A	97	75.542	ENSMICG00000002709	POC1A	97	75.776	Microcebus_murinus
ENSSDUG00000016161	POC1A	70	75.000	ENSMOCG00000003396	Poc1a	85	75.000	Microtus_ochrogaster
ENSSDUG00000016161	POC1A	99	90.592	ENSMMOG00000010427	poc1a	95	90.592	Mola_mola
ENSSDUG00000016161	POC1A	91	60.563	ENSMODG00000011717	POC1A	81	75.399	Monodelphis_domestica
ENSSDUG00000016161	POC1A	77	100.000	ENSMALG00000009054	poc1a	96	100.000	Monopterus_albus
ENSSDUG00000016161	POC1A	97	63.596	MGP_CAROLIEiJ_G0032617	Poc1a	94	82.143	Mus_caroli
ENSSDUG00000016161	POC1A	97	63.596	ENSMUSG00000023345	Poc1a	94	82.143	Mus_musculus
ENSSDUG00000016161	POC1A	97	63.656	MGP_PahariEiJ_G0015485	Poc1a	94	82.143	Mus_pahari
ENSSDUG00000016161	POC1A	97	63.596	MGP_SPRETEiJ_G0033763	Poc1a	94	82.143	Mus_spretus
ENSSDUG00000016161	POC1A	97	62.637	ENSMPUG00000011723	POC1A	83	71.637	Mustela_putorius_furo
ENSSDUG00000016161	POC1A	97	63.956	ENSMLUG00000015092	POC1A	90	63.755	Myotis_lucifugus
ENSSDUG00000016161	POC1A	97	64.035	ENSNGAG00000005212	Poc1a	79	74.772	Nannospalax_galili
ENSSDUG00000016161	POC1A	98	77.342	ENSNBRG00000022135	poc1a	98	76.638	Neolamprologus_brichardi
ENSSDUG00000016161	POC1A	95	57.075	ENSNLEG00000007084	POC1A	96	73.750	Nomascus_leucogenys
ENSSDUG00000016161	POC1A	69	88.462	ENSMEUG00000007715	-	77	88.462	Notamacropus_eugenii
ENSSDUG00000016161	POC1A	95	62.736	ENSOPRG00000008831	POC1A	90	62.061	Ochotona_princeps
ENSSDUG00000016161	POC1A	97	58.186	ENSODEG00000018290	POC1A	89	80.851	Octodon_degus
ENSSDUG00000016161	POC1A	100	87.712	ENSONIG00000014378	POC1A	100	87.712	Oreochromis_niloticus
ENSSDUG00000016161	POC1A	95	62.233	ENSOCUG00000002080	POC1A	76	74.740	Oryctolagus_cuniculus
ENSSDUG00000016161	POC1A	99	80.901	ENSOMEG00000019834	POC1A	99	80.687	Oryzias_melastigma
ENSSDUG00000016161	POC1A	96	59.560	ENSOGAG00000032245	POC1A	83	72.543	Otolemur_garnettii
ENSSDUG00000016161	POC1A	97	63.938	ENSOARG00000006352	POC1A	97	64.381	Ovis_aries
ENSSDUG00000016161	POC1A	95	57.783	ENSPPAG00000043583	POC1A	96	74.688	Pan_paniscus
ENSSDUG00000016161	POC1A	74	88.462	ENSPPRG00000003365	POC1A	94	88.462	Panthera_pardus
ENSSDUG00000016161	POC1A	95	56.909	ENSPTIG00000005388	POC1A	84	70.476	Panthera_tigris_altaica
ENSSDUG00000016161	POC1A	95	57.783	ENSPTRG00000014989	POC1A	96	74.688	Pan_troglodytes
ENSSDUG00000016161	POC1A	66	81.107	ENSPSIG00000014809	POC1A	87	81.107	Pelodiscus_sinensis
ENSSDUG00000016161	POC1A	99	69.379	ENSPMGG00000005356	poc1a	87	80.460	Periophthalmus_magnuspinnatus
ENSSDUG00000016161	POC1A	91	62.704	ENSPEMG00000024131	Poc1a	97	74.923	Peromyscus_maniculatus_bairdii
ENSSDUG00000016161	POC1A	96	62.227	ENSPMAG00000000333	poc1a	78	75.472	Petromyzon_marinus
ENSSDUG00000016161	POC1A	97	61.926	ENSPCIG00000018160	POC1A	92	73.994	Phascolarctos_cinereus
ENSSDUG00000016161	POC1A	97	59.121	ENSPPYG00000013816	POC1A	84	71.676	Pongo_abelii
ENSSDUG00000016161	POC1A	98	59.091	ENSPCAG00000002118	POC1A	83	72.515	Procavia_capensis
ENSSDUG00000016161	POC1A	97	75.312	ENSPCOG00000012625	POC1A	96	75.312	Propithecus_coquereli
ENSSDUG00000016161	POC1A	71	88.462	ENSPVAG00000012480	POC1A	82	88.462	Pteropus_vampyrus
ENSSDUG00000016161	POC1A	98	82.035	ENSPNYG00000019517	poc1a	98	81.818	Pundamilia_nyererei
ENSSDUG00000016161	POC1A	99	71.058	ENSPNAG00000007556	POC1A	98	68.951	Pygocentrus_nattereri
ENSSDUG00000016161	POC1A	95	75.694	ENSRNOG00000037295	Poc1a	78	75.694	Rattus_norvegicus
ENSSDUG00000016161	POC1A	95	62.945	ENSRBIG00000031748	POC1A	96	73.252	Rhinopithecus_bieti
ENSSDUG00000016161	POC1A	95	62.708	ENSRROG00000044472	POC1A	96	72.590	Rhinopithecus_roxellana
ENSSDUG00000016161	POC1A	97	72.171	ENSSBOG00000027902	POC1A	97	72.171	Saimiri_boliviensis_boliviensis
ENSSDUG00000016161	POC1A	100	88.347	ENSSMAG00000013505	POC1A	99	95.222	Scophthalmus_maximus
ENSSDUG00000016161	POC1A	100	99.145	ENSSLDG00000003828	POC1A	100	99.145	Seriola_lalandi_dorsalis
ENSSDUG00000016161	POC1A	64	78.986	ENSSPUG00000008656	POC1A	99	61.435	Sphenodon_punctatus
ENSSDUG00000016161	POC1A	99	44.785	ENSSPAG00000020330	POC1A	74	76.947	Stegastes_partitus
ENSSDUG00000016161	POC1A	97	60.480	ENSSSCG00000011426	POC1A	85	72.206	Sus_scrofa
ENSSDUG00000016161	POC1A	97	64.823	ENSTGUG00000006036	POC1A	89	81.395	Taeniopygia_guttata
ENSSDUG00000016161	POC1A	96	72.867	ENSTRUG00000007900	POC1A	78	86.458	Takifugu_rubripes
ENSSDUG00000016161	POC1A	99	71.726	ENSTNIG00000014818	POC1A	99	70.082	Tetraodon_nigroviridis
ENSSDUG00000016161	POC1A	97	74.286	ENSTTRG00000016798	POC1A	89	80.435	Tursiops_truncatus
ENSSDUG00000016161	POC1A	97	63.077	ENSUAMG00000020816	POC1A	96	72.449	Ursus_americanus
ENSSDUG00000016161	POC1A	95	62.028	ENSUMAG00000021482	POC1A	98	57.547	Ursus_maritimus
ENSSDUG00000016161	POC1A	96	63.778	ENSXETG00000010813	poc1a	97	62.832	Xenopus_tropicalis