EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016188 (Gene tree)
Gene ID: -
Gene Symbol: zmat3
Alias: zmp:0000000878
Full Name: zinc finger%2C matrin-type 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4572 bases
Position: chrBDQW01000002.1:11439039-11443610
Accession: ZDB-GENE-130530-881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022252	zf-met	PF12874.7	9.6e-24	1	3
ENSSDUP00000022252	zf-met	PF12874.7	9.6e-24	2	3
ENSSDUP00000022252	zf-met	PF12874.7	9.6e-24	3	3
ENSSDUP00000022252	zf-C2H2_jaz	PF12171.8	4.5e-21	1	3
ENSSDUP00000022252	zf-C2H2_jaz	PF12171.8	4.5e-21	2	3
ENSSDUP00000022252	zf-C2H2_jaz	PF12171.8	4.5e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022660	-	996	-	ENSSDUP00000022252	331 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016188	zmat3	70	35.606	ENSSDUG00000005878	zmat4a	60	35.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016188	zmat3	74	66.008	ENSG00000172667	ZMAT3	96	61.888	Homo_sapiens
ENSSDUG00000016188	zmat3	100	88.358	ENSAPOG00000015037	zmat3	99	81.338	Acanthochromis_polyacanthus
ENSSDUG00000016188	zmat3	91	59.283	ENSAMEG00000010742	ZMAT3	86	65.354	Ailuropoda_melanoleuca
ENSSDUG00000016188	zmat3	97	75.000	ENSACIG00000023037	zmat3	99	72.866	Amphilophus_citrinellus
ENSSDUG00000016188	zmat3	100	88.358	ENSAOCG00000017955	zmat3	94	71.903	Amphiprion_ocellaris
ENSSDUG00000016188	zmat3	84	88.087	ENSAPEG00000014553	zmat3	97	88.087	Amphiprion_percula
ENSSDUG00000016188	zmat3	81	85.502	ENSATEG00000022244	zmat3	96	85.502	Anabas_testudineus
ENSSDUG00000016188	zmat3	93	57.051	ENSAPLG00000013292	ZMAT3	85	63.424	Anas_platyrhynchos
ENSSDUG00000016188	zmat3	74	66.532	ENSACAG00000005005	ZMAT3	94	61.484	Anolis_carolinensis
ENSSDUG00000016188	zmat3	72	62.041	ENSANAG00000035673	ZMAT3	85	62.753	Aotus_nancymaae
ENSSDUG00000016188	zmat3	100	86.269	ENSACLG00000026272	zmat3	90	85.606	Astatotilapia_calliptera
ENSSDUG00000016188	zmat3	97	63.110	ENSAMXG00000009798	zmat3	83	61.702	Astyanax_mexicanus
ENSSDUG00000016188	zmat3	74	64.683	ENSBTAG00000012463	ZMAT3	98	61.168	Bos_taurus
ENSSDUG00000016188	zmat3	85	60.490	ENSCJAG00000013399	ZMAT3	97	61.111	Callithrix_jacchus
ENSSDUG00000016188	zmat3	91	59.672	ENSCAFG00000011081	ZMAT3	86	66.142	Canis_familiaris
ENSSDUG00000016188	zmat3	91	59.672	ENSCAFG00020023107	ZMAT3	86	66.142	Canis_lupus_dingo
ENSSDUG00000016188	zmat3	74	66.008	ENSCHIG00000025074	ZMAT3	96	61.888	Capra_hircus
ENSSDUG00000016188	zmat3	74	64.542	ENSTSYG00000026546	ZMAT3	86	65.217	Carlito_syrichta
ENSSDUG00000016188	zmat3	74	65.873	ENSCAPG00000014645	ZMAT3	85	65.873	Cavia_aperea
ENSSDUG00000016188	zmat3	74	65.873	ENSCPOG00000003865	ZMAT3	86	65.873	Cavia_porcellus
ENSSDUG00000016188	zmat3	85	59.790	ENSCCAG00000036721	ZMAT3	97	60.976	Cebus_capucinus
ENSSDUG00000016188	zmat3	85	55.556	ENSCATG00000025137	ZMAT3	98	55.556	Cercocebus_atys
ENSSDUG00000016188	zmat3	74	65.476	ENSCLAG00000013464	ZMAT3	98	60.900	Chinchilla_lanigera
ENSSDUG00000016188	zmat3	74	65.613	ENSCSAG00000012935	ZMAT3	96	61.189	Chlorocebus_sabaeus
ENSSDUG00000016188	zmat3	74	66.798	ENSCHOG00000005591	ZMAT3	97	62.369	Choloepus_hoffmanni
ENSSDUG00000016188	zmat3	71	64.609	ENSCPBG00000026917	ZMAT3	95	58.741	Chrysemys_picta_bellii
ENSSDUG00000016188	zmat3	74	65.354	ENSCANG00000029476	ZMAT3	96	61.324	Colobus_angolensis_palliatus
ENSSDUG00000016188	zmat3	74	65.217	ENSCGRG00001012339	Zmat3	86	65.217	Cricetulus_griseus_chok1gshd
ENSSDUG00000016188	zmat3	74	65.217	ENSCGRG00000011491	Zmat3	86	65.217	Cricetulus_griseus_crigri
ENSSDUG00000016188	zmat3	100	80.597	ENSCSEG00000019463	zmat3	95	67.470	Cynoglossus_semilaevis
ENSSDUG00000016188	zmat3	100	80.952	ENSCVAG00000011847	zmat3	100	68.060	Cyprinodon_variegatus
ENSSDUG00000016188	zmat3	69	74.576	ENSDARG00000080021	zmat3	96	62.883	Danio_rerio
ENSSDUG00000016188	zmat3	74	65.748	ENSDNOG00000012284	ZMAT3	97	61.806	Dasypus_novemcinctus
ENSSDUG00000016188	zmat3	73	65.726	ENSDORG00000011801	Zmat3	84	65.726	Dipodomys_ordii
ENSSDUG00000016188	zmat3	65	61.017	ENSETEG00000008883	ZMAT3	74	61.017	Echinops_telfairi
ENSSDUG00000016188	zmat3	74	65.613	ENSEASG00005016887	ZMAT3	86	65.613	Equus_asinus_asinus
ENSSDUG00000016188	zmat3	74	65.613	ENSECAG00000012784	ZMAT3	86	65.613	Equus_caballus
ENSSDUG00000016188	zmat3	85	55.363	ENSEEUG00000001126	ZMAT3	98	55.363	Erinaceus_europaeus
ENSSDUG00000016188	zmat3	77	74.903	ENSELUG00000010132	zmat3	84	66.366	Esox_lucius
ENSSDUG00000016188	zmat3	91	59.804	ENSFCAG00000014578	ZMAT3	96	61.592	Felis_catus
ENSSDUG00000016188	zmat3	88	67.811	ENSFALG00000008403	ZMAT3	78	67.811	Ficedula_albicollis
ENSSDUG00000016188	zmat3	74	65.217	ENSFDAG00000013376	ZMAT3	86	65.217	Fukomys_damarensis
ENSSDUG00000016188	zmat3	85	81.071	ENSFHEG00000003221	zmat3	97	81.071	Fundulus_heteroclitus
ENSSDUG00000016188	zmat3	74	76.707	ENSGMOG00000008558	zmat3	100	76.707	Gadus_morhua
ENSSDUG00000016188	zmat3	88	64.202	ENSGALG00000040948	ZMAT3	99	63.359	Gallus_gallus
ENSSDUG00000016188	zmat3	80	84.470	ENSGACG00000006175	zmat3	100	84.470	Gasterosteus_aculeatus
ENSSDUG00000016188	zmat3	84	58.537	ENSGAGG00000009275	ZMAT3	95	58.537	Gopherus_agassizii
ENSSDUG00000016188	zmat3	74	66.008	ENSGGOG00000009975	ZMAT3	96	61.888	Gorilla_gorilla
ENSSDUG00000016188	zmat3	100	86.269	ENSHBUG00000004401	zmat3	100	71.601	Haplochromis_burtoni
ENSSDUG00000016188	zmat3	74	65.476	ENSHGLG00000011523	ZMAT3	86	65.476	Heterocephalus_glaber_female
ENSSDUG00000016188	zmat3	74	65.476	ENSHGLG00100012235	ZMAT3	86	65.476	Heterocephalus_glaber_male
ENSSDUG00000016188	zmat3	100	75.904	ENSHCOG00000010624	zmat3	98	75.904	Hippocampus_comes
ENSSDUG00000016188	zmat3	97	59.878	ENSIPUG00000003043	zmat3	84	70.886	Ictalurus_punctatus
ENSSDUG00000016188	zmat3	74	65.339	ENSSTOG00000028436	ZMAT3	86	66.403	Ictidomys_tridecemlineatus
ENSSDUG00000016188	zmat3	69	67.672	ENSJJAG00000004288	Zmat3	97	60.839	Jaculus_jaculus
ENSSDUG00000016188	zmat3	100	83.832	ENSKMAG00000008962	zmat3	89	86.420	Kryptolebias_marmoratus
ENSSDUG00000016188	zmat3	85	81.469	ENSLBEG00000001993	zmat3	97	81.469	Labrus_bergylta
ENSSDUG00000016188	zmat3	92	54.938	ENSLACG00000015780	ZMAT3	79	57.586	Latimeria_chalumnae
ENSSDUG00000016188	zmat3	75	68.750	ENSLOCG00000001108	zmat3	75	66.787	Lepisosteus_oculatus
ENSSDUG00000016188	zmat3	74	66.935	ENSLAFG00000000897	ZMAT3	83	66.935	Loxodonta_africana
ENSSDUG00000016188	zmat3	74	65.613	ENSMFAG00000021292	ZMAT3	96	61.189	Macaca_fascicularis
ENSSDUG00000016188	zmat3	74	65.354	ENSMMUG00000003216	ZMAT3	86	65.354	Macaca_mulatta
ENSSDUG00000016188	zmat3	74	65.354	ENSMNEG00000036725	ZMAT3	96	60.976	Macaca_nemestrina
ENSSDUG00000016188	zmat3	86	61.168	ENSMLEG00000026279	ZMAT3	98	61.379	Mandrillus_leucophaeus
ENSSDUG00000016188	zmat3	100	85.970	ENSMAMG00000012349	zmat3	90	85.357	Mastacembelus_armatus
ENSSDUG00000016188	zmat3	100	86.269	ENSMZEG00005015427	zmat3	91	80.000	Maylandia_zebra
ENSSDUG00000016188	zmat3	93	57.372	ENSMGAG00000009873	ZMAT3	97	60.137	Meleagris_gallopavo
ENSSDUG00000016188	zmat3	74	65.217	ENSMAUG00000001986	Zmat3	85	65.217	Mesocricetus_auratus
ENSSDUG00000016188	zmat3	91	58.689	ENSMICG00000049501	ZMAT3	98	60.554	Microcebus_murinus
ENSSDUG00000016188	zmat3	74	65.613	ENSMOCG00000018844	Zmat3	86	65.613	Microtus_ochrogaster
ENSSDUG00000016188	zmat3	100	83.988	ENSMMOG00000001603	zmat3	100	83.988	Mola_mola
ENSSDUG00000016188	zmat3	68	63.556	ENSMODG00000021308	ZMAT3	74	64.602	Monodelphis_domestica
ENSSDUG00000016188	zmat3	100	83.284	ENSMALG00000019683	zmat3	97	85.263	Monopterus_albus
ENSSDUG00000016188	zmat3	74	65.354	MGP_CAROLIEiJ_G0024914	Zmat3	86	65.354	Mus_caroli
ENSSDUG00000016188	zmat3	74	65.354	ENSMUSG00000027663	Zmat3	86	65.354	Mus_musculus
ENSSDUG00000016188	zmat3	74	64.567	MGP_PahariEiJ_G0026359	Zmat3	86	64.567	Mus_pahari
ENSSDUG00000016188	zmat3	74	65.354	MGP_SPRETEiJ_G0025848	Zmat3	86	65.354	Mus_spretus
ENSSDUG00000016188	zmat3	91	59.804	ENSMPUG00000017206	ZMAT3	80	69.068	Mustela_putorius_furo
ENSSDUG00000016188	zmat3	74	65.234	ENSMLUG00000013074	ZMAT3	86	65.234	Myotis_lucifugus
ENSSDUG00000016188	zmat3	73	65.854	ENSNGAG00000023602	Zmat3	84	65.854	Nannospalax_galili
ENSSDUG00000016188	zmat3	100	70.997	ENSNBRG00000020886	zmat3	100	71.601	Neolamprologus_brichardi
ENSSDUG00000016188	zmat3	74	65.748	ENSNLEG00000005658	ZMAT3	96	61.672	Nomascus_leucogenys
ENSSDUG00000016188	zmat3	71	64.706	ENSMEUG00000015724	ZMAT3	79	65.966	Notamacropus_eugenii
ENSSDUG00000016188	zmat3	85	59.655	ENSODEG00000003313	ZMAT3	98	60.137	Octodon_degus
ENSSDUG00000016188	zmat3	99	75.150	ENSONIG00000008388	zmat3	99	76.647	Oreochromis_niloticus
ENSSDUG00000016188	zmat3	83	52.804	ENSOANG00000009901	ZMAT3	76	53.398	Ornithorhynchus_anatinus
ENSSDUG00000016188	zmat3	74	64.542	ENSOCUG00000004658	ZMAT3	98	60.345	Oryctolagus_cuniculus
ENSSDUG00000016188	zmat3	100	78.806	ENSORLG00000011575	zmat3	68	78.806	Oryzias_latipes
ENSSDUG00000016188	zmat3	100	78.507	ENSORLG00020005858	zmat3	68	78.507	Oryzias_latipes_hni
ENSSDUG00000016188	zmat3	100	78.806	ENSORLG00015003707	zmat3	68	78.806	Oryzias_latipes_hsok
ENSSDUG00000016188	zmat3	100	79.701	ENSOMEG00000011303	zmat3	78	83.401	Oryzias_melastigma
ENSSDUG00000016188	zmat3	74	64.961	ENSOGAG00000003252	ZMAT3	98	60.137	Otolemur_garnettii
ENSSDUG00000016188	zmat3	74	65.748	ENSOARG00000020713	ZMAT3	96	61.672	Ovis_aries
ENSSDUG00000016188	zmat3	74	66.008	ENSPPAG00000035483	ZMAT3	96	61.888	Pan_paniscus
ENSSDUG00000016188	zmat3	91	60.261	ENSPPRG00000004407	ZMAT3	86	66.535	Panthera_pardus
ENSSDUG00000016188	zmat3	91	60.261	ENSPTIG00000009929	ZMAT3	86	66.535	Panthera_tigris_altaica
ENSSDUG00000016188	zmat3	74	65.748	ENSPTRG00000015641	ZMAT3	96	61.672	Pan_troglodytes
ENSSDUG00000016188	zmat3	86	60.959	ENSPANG00000023167	ZMAT3	98	61.168	Papio_anubis
ENSSDUG00000016188	zmat3	75	69.721	ENSPKIG00000023370	zmat3	70	68.872	Paramormyrops_kingsleyae
ENSSDUG00000016188	zmat3	90	57.912	ENSPSIG00000014839	ZMAT3	85	62.846	Pelodiscus_sinensis
ENSSDUG00000016188	zmat3	75	77.912	ENSPMGG00000023924	zmat3	90	77.912	Periophthalmus_magnuspinnatus
ENSSDUG00000016188	zmat3	74	64.427	ENSPEMG00000019154	Zmat3	85	64.427	Peromyscus_maniculatus_bairdii
ENSSDUG00000016188	zmat3	99	81.818	ENSPFOG00000019206	zmat3	85	82.424	Poecilia_formosa
ENSSDUG00000016188	zmat3	100	70.091	ENSPLAG00000022572	zmat3	100	70.091	Poecilia_latipinna
ENSSDUG00000016188	zmat3	100	63.746	ENSPMEG00000004131	-	100	64.350	Poecilia_mexicana
ENSSDUG00000016188	zmat3	100	82.335	ENSPREG00000022632	zmat3	100	69.789	Poecilia_reticulata
ENSSDUG00000016188	zmat3	74	65.613	ENSPPYG00000014315	ZMAT3	96	61.538	Pongo_abelii
ENSSDUG00000016188	zmat3	74	64.567	ENSPCAG00000008585	ZMAT3	98	59.794	Procavia_capensis
ENSSDUG00000016188	zmat3	91	58.689	ENSPCOG00000022835	ZMAT3	98	60.554	Propithecus_coquereli
ENSSDUG00000016188	zmat3	74	65.354	ENSPVAG00000004489	ZMAT3	86	65.354	Pteropus_vampyrus
ENSSDUG00000016188	zmat3	100	70.997	ENSPNYG00000014350	zmat3	100	71.601	Pundamilia_nyererei
ENSSDUG00000016188	zmat3	97	63.110	ENSPNAG00000015664	zmat3	83	62.006	Pygocentrus_nattereri
ENSSDUG00000016188	zmat3	85	61.246	ENSRNOG00000010119	Zmat3	96	61.246	Rattus_norvegicus
ENSSDUG00000016188	zmat3	74	65.613	ENSRBIG00000029622	ZMAT3	96	61.538	Rhinopithecus_bieti
ENSSDUG00000016188	zmat3	74	65.354	ENSRROG00000038345	ZMAT3	96	61.324	Rhinopithecus_roxellana
ENSSDUG00000016188	zmat3	74	64.542	ENSSBOG00000033332	ZMAT3	97	61.672	Saimiri_boliviensis_boliviensis
ENSSDUG00000016188	zmat3	74	65.041	ENSSHAG00000016154	ZMAT3	80	67.078	Sarcophilus_harrisii
ENSSDUG00000016188	zmat3	75	72.000	ENSSFOG00015006984	zmat3	99	61.006	Scleropages_formosus
ENSSDUG00000016188	zmat3	100	81.844	ENSSMAG00000019540	-	74	86.905	Scophthalmus_maximus
ENSSDUG00000016188	zmat3	100	100.000	ENSSLDG00000018611	zmat3	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000016188	zmat3	50	62.791	ENSSARG00000004901	ZMAT3	76	62.791	Sorex_araneus
ENSSDUG00000016188	zmat3	69	66.524	ENSSPUG00000014753	ZMAT3	79	66.524	Sphenodon_punctatus
ENSSDUG00000016188	zmat3	98	88.000	ENSSPAG00000011062	zmat3	100	88.000	Stegastes_partitus
ENSSDUG00000016188	zmat3	85	60.000	ENSSSCG00000033860	ZMAT3	98	60.000	Sus_scrofa
ENSSDUG00000016188	zmat3	69	67.811	ENSTGUG00000010765	-	97	58.644	Taeniopygia_guttata
ENSSDUG00000016188	zmat3	93	75.728	ENSTRUG00000004788	zmat3	96	79.004	Takifugu_rubripes
ENSSDUG00000016188	zmat3	85	82.624	ENSTNIG00000006781	zmat3	99	82.624	Tetraodon_nigroviridis
ENSSDUG00000016188	zmat3	67	73.684	ENSTBEG00000012359	ZMAT3	94	73.684	Tupaia_belangeri
ENSSDUG00000016188	zmat3	74	63.386	ENSTTRG00000004923	ZMAT3	98	57.966	Tursiops_truncatus
ENSSDUG00000016188	zmat3	91	58.632	ENSUAMG00000007623	ZMAT3	86	64.567	Ursus_americanus
ENSSDUG00000016188	zmat3	91	58.824	ENSUMAG00000007847	ZMAT3	86	64.822	Ursus_maritimus
ENSSDUG00000016188	zmat3	74	65.748	ENSVPAG00000006611	ZMAT3	98	61.017	Vicugna_pacos
ENSSDUG00000016188	zmat3	91	59.672	ENSVVUG00000004729	ZMAT3	86	66.142	Vulpes_vulpes
ENSSDUG00000016188	zmat3	90	55.518	ENSXETG00000007251	zmat3	90	58.889	Xenopus_tropicalis
ENSSDUG00000016188	zmat3	77	85.156	ENSXCOG00000008397	zmat3	90	85.156	Xiphophorus_couchianus
ENSSDUG00000016188	zmat3	100	82.036	ENSXMAG00000015188	zmat3	69	82.335	Xiphophorus_maculatus