EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016218 (Gene tree)
Gene ID: 111226837
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 14882 bases
Position: chrBDQW01000166.1:494666-509547
Accession: 111226837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022282	IBN_N	PF03810.19	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022690	-	4414	XM_022752131	ENSSDUP00000022282	876 (aa)	XP_022607852	UPI000BBE633C

Gene Model

Click here to download ENSSDUG00000016218's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016218	kpnb1	100	93.151	ENSG00000108424	KPNB1	99	95.205	Homo_sapiens
ENSSDUG00000016218	kpnb1	100	99.543	ENSAPOG00000020572	kpnb1	100	99.543	Acanthochromis_polyacanthus
ENSSDUG00000016218	kpnb1	96	93.365	ENSAMEG00000004613	KPNB1	100	93.365	Ailuropoda_melanoleuca
ENSSDUG00000016218	kpnb1	98	99.416	ENSACIG00000023130	kpnb1	99	99.416	Amphilophus_citrinellus
ENSSDUG00000016218	kpnb1	100	99.543	ENSAOCG00000007048	kpnb1	100	99.543	Amphiprion_ocellaris
ENSSDUG00000016218	kpnb1	100	99.543	ENSAPEG00000008270	kpnb1	100	99.543	Amphiprion_percula
ENSSDUG00000016218	kpnb1	100	98.973	ENSATEG00000015139	kpnb1	100	98.973	Anabas_testudineus
ENSSDUG00000016218	kpnb1	96	93.018	ENSAPLG00000010177	KPNB1	96	93.018	Anas_platyrhynchos
ENSSDUG00000016218	kpnb1	100	93.607	ENSACAG00000007097	KPNB1	100	93.607	Anolis_carolinensis
ENSSDUG00000016218	kpnb1	100	90.411	ENSANAG00000024932	-	99	90.411	Aotus_nancymaae
ENSSDUG00000016218	kpnb1	100	99.087	ENSACLG00000015070	kpnb1	100	99.087	Astatotilapia_calliptera
ENSSDUG00000016218	kpnb1	100	97.717	ENSAMXG00000041903	kpnb1	100	97.717	Astyanax_mexicanus
ENSSDUG00000016218	kpnb1	100	93.493	ENSBTAG00000006586	KPNB1	100	93.493	Bos_taurus
ENSSDUG00000016218	kpnb1	99	48.009	WBGene00002075	imb-1	98	48.009	Caenorhabditis_elegans
ENSSDUG00000016218	kpnb1	100	93.265	ENSCJAG00000007834	KPNB1	100	93.265	Callithrix_jacchus
ENSSDUG00000016218	kpnb1	100	93.493	ENSCAFG00000016678	KPNB1	100	93.493	Canis_familiaris
ENSSDUG00000016218	kpnb1	100	93.493	ENSCAFG00020023205	KPNB1	100	93.493	Canis_lupus_dingo
ENSSDUG00000016218	kpnb1	100	93.493	ENSCHIG00000014896	KPNB1	100	93.493	Capra_hircus
ENSSDUG00000016218	kpnb1	100	91.553	ENSTSYG00000014472	KPNB1	99	91.553	Carlito_syrichta
ENSSDUG00000016218	kpnb1	96	93.594	ENSCAPG00000014185	KPNB1	100	93.594	Cavia_aperea
ENSSDUG00000016218	kpnb1	100	93.493	ENSCPOG00000006566	KPNB1	100	93.493	Cavia_porcellus
ENSSDUG00000016218	kpnb1	100	86.508	ENSCCAG00000029263	-	99	86.508	Cebus_capucinus
ENSSDUG00000016218	kpnb1	100	71.017	ENSCCAG00000018551	-	100	71.017	Cebus_capucinus
ENSSDUG00000016218	kpnb1	100	93.151	ENSCATG00000037124	KPNB1	100	93.151	Cercocebus_atys
ENSSDUG00000016218	kpnb1	100	93.379	ENSCLAG00000017091	KPNB1	100	93.379	Chinchilla_lanigera
ENSSDUG00000016218	kpnb1	100	93.151	ENSCSAG00000002605	KPNB1	100	93.151	Chlorocebus_sabaeus
ENSSDUG00000016218	kpnb1	73	86.792	ENSCHOG00000010604	KPNB1	73	86.792	Choloepus_hoffmanni
ENSSDUG00000016218	kpnb1	99	93.975	ENSCPBG00000027423	KPNB1	94	93.975	Chrysemys_picta_bellii
ENSSDUG00000016218	kpnb1	99	65.108	ENSCING00000004639	-	99	65.108	Ciona_intestinalis
ENSSDUG00000016218	kpnb1	100	62.599	ENSCSAVG00000008624	-	100	62.599	Ciona_savignyi
ENSSDUG00000016218	kpnb1	96	94.021	ENSCANG00000013489	KPNB1	100	94.021	Colobus_angolensis_palliatus
ENSSDUG00000016218	kpnb1	100	93.379	ENSCGRG00001016042	Kpnb1	100	93.379	Cricetulus_griseus_chok1gshd
ENSSDUG00000016218	kpnb1	96	93.476	ENSCGRG00000013910	Kpnb1	100	93.476	Cricetulus_griseus_crigri
ENSSDUG00000016218	kpnb1	97	95.188	ENSCSEG00000007991	kpnb1	100	95.188	Cynoglossus_semilaevis
ENSSDUG00000016218	kpnb1	100	97.260	ENSDARG00000104889	kpnb1	100	97.260	Danio_rerio
ENSSDUG00000016218	kpnb1	99	62.557	FBgn0262743	Fs(2)Ket	99	62.557	Drosophila_melanogaster
ENSSDUG00000016218	kpnb1	98	81.323	ENSEBUG00000013869	kpnb1	98	81.323	Eptatretus_burgeri
ENSSDUG00000016218	kpnb1	100	93.493	ENSEASG00005000805	KPNB1	100	93.493	Equus_asinus_asinus
ENSSDUG00000016218	kpnb1	100	93.493	ENSECAG00000014560	KPNB1	100	93.493	Equus_caballus
ENSSDUG00000016218	kpnb1	85	93.467	ENSEEUG00000005046	KPNB1	88	93.467	Erinaceus_europaeus
ENSSDUG00000016218	kpnb1	100	98.516	ENSELUG00000015847	kpnb1	100	98.516	Esox_lucius
ENSSDUG00000016218	kpnb1	100	93.493	ENSFCAG00000023994	KPNB1	100	93.493	Felis_catus
ENSSDUG00000016218	kpnb1	96	93.832	ENSFDAG00000019923	KPNB1	100	93.832	Fukomys_damarensis
ENSSDUG00000016218	kpnb1	100	98.402	ENSFHEG00000020199	kpnb1	100	98.402	Fundulus_heteroclitus
ENSSDUG00000016218	kpnb1	100	93.379	ENSGMOG00000011607	kpnb1	99	93.379	Gadus_morhua
ENSSDUG00000016218	kpnb1	100	93.379	ENSGALG00000036962	KPNB1	100	93.379	Gallus_gallus
ENSSDUG00000016218	kpnb1	100	98.174	ENSGAFG00000000783	kpnb1	100	98.174	Gambusia_affinis
ENSSDUG00000016218	kpnb1	100	94.463	ENSGACG00000014765	kpnb1	100	94.463	Gasterosteus_aculeatus
ENSSDUG00000016218	kpnb1	96	93.460	ENSGAGG00000023737	KPNB1	92	93.460	Gopherus_agassizii
ENSSDUG00000016218	kpnb1	100	93.151	ENSGGOG00000008089	KPNB1	100	93.151	Gorilla_gorilla
ENSSDUG00000016218	kpnb1	100	99.087	ENSHBUG00000016826	kpnb1	100	99.087	Haplochromis_burtoni
ENSSDUG00000016218	kpnb1	100	93.721	ENSHGLG00000014138	KPNB1	100	93.721	Heterocephalus_glaber_female
ENSSDUG00000016218	kpnb1	96	93.832	ENSHGLG00100006572	KPNB1	100	93.832	Heterocephalus_glaber_male
ENSSDUG00000016218	kpnb1	100	95.320	ENSHCOG00000002084	kpnb1	100	95.320	Hippocampus_comes
ENSSDUG00000016218	kpnb1	99	92.816	ENSIPUG00000012402	kpnb1	95	92.816	Ictalurus_punctatus
ENSSDUG00000016218	kpnb1	100	93.493	ENSSTOG00000007896	KPNB1	100	93.493	Ictidomys_tridecemlineatus
ENSSDUG00000016218	kpnb1	100	93.379	ENSJJAG00000010909	Kpnb1	100	93.379	Jaculus_jaculus
ENSSDUG00000016218	kpnb1	100	97.831	ENSKMAG00000001547	kpnb1	100	97.831	Kryptolebias_marmoratus
ENSSDUG00000016218	kpnb1	99	98.731	ENSLBEG00000025794	kpnb1	99	96.842	Labrus_bergylta
ENSSDUG00000016218	kpnb1	88	92.866	ENSLACG00000017620	KPNB1	99	92.866	Latimeria_chalumnae
ENSSDUG00000016218	kpnb1	100	98.059	ENSLOCG00000013753	kpnb1	100	98.059	Lepisosteus_oculatus
ENSSDUG00000016218	kpnb1	100	88.470	ENSLAFG00000001328	KPNB1	100	88.470	Loxodonta_africana
ENSSDUG00000016218	kpnb1	99	90.722	ENSMFAG00000030197	KPNB1	100	93.238	Macaca_fascicularis
ENSSDUG00000016218	kpnb1	99	91.657	ENSMMUG00000019760	KPNB1	99	91.657	Macaca_mulatta
ENSSDUG00000016218	kpnb1	100	93.151	ENSMNEG00000040927	KPNB1	100	93.151	Macaca_nemestrina
ENSSDUG00000016218	kpnb1	100	90.753	ENSMLEG00000038185	KPNB1	99	90.753	Mandrillus_leucophaeus
ENSSDUG00000016218	kpnb1	100	99.658	ENSMAMG00000011036	kpnb1	100	99.658	Mastacembelus_armatus
ENSSDUG00000016218	kpnb1	100	99.087	ENSMZEG00005004564	kpnb1	100	99.087	Maylandia_zebra
ENSSDUG00000016218	kpnb1	55	92.961	ENSMGAG00000002770	-	100	92.961	Meleagris_gallopavo
ENSSDUG00000016218	kpnb1	100	93.379	ENSMAUG00000006211	Kpnb1	100	93.379	Mesocricetus_auratus
ENSSDUG00000016218	kpnb1	100	93.493	ENSMICG00000012059	KPNB1	84	93.493	Microcebus_murinus
ENSSDUG00000016218	kpnb1	100	93.379	ENSMOCG00000003683	Kpnb1	100	93.379	Microtus_ochrogaster
ENSSDUG00000016218	kpnb1	100	93.950	ENSMODG00000012505	KPNB1	100	93.950	Monodelphis_domestica
ENSSDUG00000016218	kpnb1	100	99.658	ENSMALG00000000863	kpnb1	100	99.658	Monopterus_albus
ENSSDUG00000016218	kpnb1	94	93.674	MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.674	Mus_caroli
ENSSDUG00000016218	kpnb1	100	93.265	ENSMUSG00000001440	Kpnb1	100	93.265	Mus_musculus
ENSSDUG00000016218	kpnb1	100	92.474	ENSMPUG00000015220	KPNB1	100	92.474	Mustela_putorius_furo
ENSSDUG00000016218	kpnb1	100	88.610	ENSMLUG00000014522	KPNB1	100	88.610	Myotis_lucifugus
ENSSDUG00000016218	kpnb1	96	93.476	ENSNGAG00000017610	Kpnb1	100	93.476	Nannospalax_galili
ENSSDUG00000016218	kpnb1	100	99.087	ENSNBRG00000019305	kpnb1	100	99.087	Neolamprologus_brichardi
ENSSDUG00000016218	kpnb1	100	93.151	ENSNLEG00000001446	KPNB1	100	93.151	Nomascus_leucogenys
ENSSDUG00000016218	kpnb1	100	88.356	ENSMEUG00000014284	KPNB1	100	88.356	Notamacropus_eugenii
ENSSDUG00000016218	kpnb1	100	93.379	ENSODEG00000017287	KPNB1	100	93.379	Octodon_degus
ENSSDUG00000016218	kpnb1	100	99.201	ENSONIG00000009269	kpnb1	100	99.201	Oreochromis_niloticus
ENSSDUG00000016218	kpnb1	100	93.493	ENSOCUG00000015425	KPNB1	100	93.493	Oryctolagus_cuniculus
ENSSDUG00000016218	kpnb1	100	98.973	ENSORLG00000019936	kpnb1	100	98.973	Oryzias_latipes
ENSSDUG00000016218	kpnb1	100	98.973	ENSORLG00020021181	kpnb1	100	98.973	Oryzias_latipes_hni
ENSSDUG00000016218	kpnb1	100	98.858	ENSORLG00015012177	kpnb1	100	98.858	Oryzias_latipes_hsok
ENSSDUG00000016218	kpnb1	100	99.087	ENSOMEG00000021022	kpnb1	100	99.087	Oryzias_melastigma
ENSSDUG00000016218	kpnb1	100	93.379	ENSOGAG00000006153	KPNB1	100	93.379	Otolemur_garnettii
ENSSDUG00000016218	kpnb1	97	92.740	ENSOARG00000008469	KPNB1	99	92.740	Ovis_aries
ENSSDUG00000016218	kpnb1	100	93.151	ENSPPAG00000028842	KPNB1	100	93.151	Pan_paniscus
ENSSDUG00000016218	kpnb1	97	93.270	ENSPPRG00000022879	KPNB1	97	93.270	Panthera_pardus
ENSSDUG00000016218	kpnb1	97	93.270	ENSPTIG00000006870	KPNB1	97	93.270	Panthera_tigris_altaica
ENSSDUG00000016218	kpnb1	100	93.151	ENSPTRG00000009333	KPNB1	100	93.151	Pan_troglodytes
ENSSDUG00000016218	kpnb1	100	93.151	ENSPANG00000022099	KPNB1	100	93.151	Papio_anubis
ENSSDUG00000016218	kpnb1	100	97.603	ENSPKIG00000017563	kpnb1	100	97.603	Paramormyrops_kingsleyae
ENSSDUG00000016218	kpnb1	96	94.069	ENSPSIG00000009775	KPNB1	100	94.069	Pelodiscus_sinensis
ENSSDUG00000016218	kpnb1	100	90.764	ENSPMGG00000001041	kpnb1	93	90.764	Periophthalmus_magnuspinnatus
ENSSDUG00000016218	kpnb1	100	93.379	ENSPEMG00000017783	Kpnb1	100	93.379	Peromyscus_maniculatus_bairdii
ENSSDUG00000016218	kpnb1	99	85.194	ENSPMAG00000007117	kpnb1	99	85.194	Petromyzon_marinus
ENSSDUG00000016218	kpnb1	100	93.950	ENSPCIG00000001034	KPNB1	100	93.950	Phascolarctos_cinereus
ENSSDUG00000016218	kpnb1	100	98.174	ENSPFOG00000009014	kpnb1	100	98.174	Poecilia_formosa
ENSSDUG00000016218	kpnb1	100	98.174	ENSPLAG00000010922	kpnb1	100	98.174	Poecilia_latipinna
ENSSDUG00000016218	kpnb1	100	98.174	ENSPREG00000012268	kpnb1	100	98.174	Poecilia_reticulata
ENSSDUG00000016218	kpnb1	100	92.694	ENSPPYG00000025935	KPNB1	100	92.694	Pongo_abelii
ENSSDUG00000016218	kpnb1	75	79.333	ENSPCAG00000002526	KPNB1	78	79.333	Procavia_capensis
ENSSDUG00000016218	kpnb1	100	93.493	ENSPCOG00000026259	KPNB1	100	93.493	Propithecus_coquereli
ENSSDUG00000016218	kpnb1	100	93.037	ENSPVAG00000004910	KPNB1	100	93.037	Pteropus_vampyrus
ENSSDUG00000016218	kpnb1	100	94.651	ENSPNYG00000017703	kpnb1	96	98.980	Pundamilia_nyererei
ENSSDUG00000016218	kpnb1	99	89.540	ENSPNAG00000024047	kpnb1	98	89.540	Pygocentrus_nattereri
ENSSDUG00000016218	kpnb1	100	93.265	ENSRNOG00000009275	Kpnb1	100	93.265	Rattus_norvegicus
ENSSDUG00000016218	kpnb1	100	93.037	ENSRBIG00000002254	KPNB1	99	93.037	Rhinopithecus_bieti
ENSSDUG00000016218	kpnb1	99	92.610	ENSRROG00000030419	KPNB1	99	92.610	Rhinopithecus_roxellana
ENSSDUG00000016218	kpnb1	99	34.243	YLR347C	KAP95	99	34.243	Saccharomyces_cerevisiae
ENSSDUG00000016218	kpnb1	100	93.151	ENSSBOG00000030025	KPNB1	94	93.151	Saimiri_boliviensis_boliviensis
ENSSDUG00000016218	kpnb1	96	93.743	ENSSHAG00000018214	KPNB1	100	93.743	Sarcophilus_harrisii
ENSSDUG00000016218	kpnb1	100	98.516	ENSSFOG00015020000	kpnb1	100	98.516	Scleropages_formosus
ENSSDUG00000016218	kpnb1	98	100.000	ENSSLDG00000021549	kpnb1	97	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000016218	kpnb1	100	93.379	ENSSPUG00000017799	KPNB1	100	93.379	Sphenodon_punctatus
ENSSDUG00000016218	kpnb1	100	99.315	ENSSPAG00000019346	kpnb1	100	99.315	Stegastes_partitus
ENSSDUG00000016218	kpnb1	100	93.493	ENSSSCG00000017514	KPNB1	100	93.493	Sus_scrofa
ENSSDUG00000016218	kpnb1	96	88.493	ENSTGUG00000003387	KPNB1	100	88.493	Taeniopygia_guttata
ENSSDUG00000016218	kpnb1	100	96.233	ENSTRUG00000000542	kpnb1	100	96.233	Takifugu_rubripes
ENSSDUG00000016218	kpnb1	100	96.918	ENSTNIG00000006494	kpnb1	100	96.918	Tetraodon_nigroviridis
ENSSDUG00000016218	kpnb1	96	93.713	ENSTTRG00000004682	KPNB1	100	93.713	Tursiops_truncatus
ENSSDUG00000016218	kpnb1	100	93.493	ENSUAMG00000025344	KPNB1	99	93.493	Ursus_americanus
ENSSDUG00000016218	kpnb1	98	92.326	ENSUMAG00000016471	KPNB1	98	92.326	Ursus_maritimus
ENSSDUG00000016218	kpnb1	100	79.795	ENSVPAG00000003675	KPNB1	100	79.795	Vicugna_pacos
ENSSDUG00000016218	kpnb1	100	93.493	ENSVVUG00000003085	KPNB1	100	93.493	Vulpes_vulpes
ENSSDUG00000016218	kpnb1	100	92.808	ENSXETG00000014717	kpnb1	100	92.808	Xenopus_tropicalis
ENSSDUG00000016218	kpnb1	100	98.059	ENSXMAG00000018792	kpnb1	100	98.059	Xiphophorus_maculatus