EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016390 (Gene tree)
Gene ID: 111216642
Gene Symbol: -
Alias: -
Full Name: G-patch domain and ankyrin repeats 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5232 bases
Position: chrBDQW01000035.1:2269637-2274868
Accession: 111216642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022552	G-patch	PF01585.23	1.4e-12	1	1
ENSSDUP00000022577	G-patch	PF01585.23	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022967	-	2781	-	ENSSDUP00000022552	289 (aa)	-	-
ENSSDUT00000022992	-	1140	XM_022738234	ENSSDUP00000022577	379 (aa)	XP_022593955	-

Gene Model

Click here to download ENSSDUG00000016390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016390	-	98	36.220	ENSG00000204438	GPANK1	96	35.000	Homo_sapiens
ENSSDUG00000016390	-	99	62.937	ENSAPOG00000010685	-	98	62.834	Acanthochromis_polyacanthus
ENSSDUG00000016390	-	99	62.937	ENSAPOG00000014355	-	98	62.834	Acanthochromis_polyacanthus
ENSSDUG00000016390	-	85	42.802	ENSAMEG00000009290	GPANK1	66	41.569	Ailuropoda_melanoleuca
ENSSDUG00000016390	-	98	78.799	ENSAOCG00000024034	GPANK1	99	73.529	Amphiprion_ocellaris
ENSSDUG00000016390	-	98	78.799	ENSAPEG00000000530	GPANK1	99	73.529	Amphiprion_percula
ENSSDUG00000016390	-	93	77.985	ENSATEG00000008243	-	96	64.343	Anabas_testudineus
ENSSDUG00000016390	-	89	43.333	ENSANAG00000026356	GPANK1	82	41.176	Aotus_nancymaae
ENSSDUG00000016390	-	91	72.348	ENSACLG00000001320	GPANK1	98	62.234	Astatotilapia_calliptera
ENSSDUG00000016390	-	92	53.846	ENSAMXG00000012581	-	67	53.846	Astyanax_mexicanus
ENSSDUG00000016390	-	98	37.173	ENSBTAG00000008835	GPANK1	97	36.220	Bos_taurus
ENSSDUG00000016390	-	85	35.317	WBGene00014256	ZK1320.7	71	34.559	Caenorhabditis_elegans
ENSSDUG00000016390	-	86	43.191	ENSCJAG00000003002	GPANK1	89	35.795	Callithrix_jacchus
ENSSDUG00000016390	-	85	42.969	ENSCAFG00000000601	GPANK1	70	41.797	Canis_familiaris
ENSSDUG00000016390	-	85	42.969	ENSCAFG00020020706	GPANK1	70	41.797	Canis_lupus_dingo
ENSSDUG00000016390	-	98	36.126	ENSCHIG00000024637	GPANK1	96	35.000	Capra_hircus
ENSSDUG00000016390	-	74	44.444	ENSTSYG00000028288	GPANK1	69	41.961	Carlito_syrichta
ENSSDUG00000016390	-	86	40.698	ENSCAPG00000005661	GPANK1	67	39.453	Cavia_aperea
ENSSDUG00000016390	-	86	41.245	ENSCPOG00000031872	GPANK1	70	39.844	Cavia_porcellus
ENSSDUG00000016390	-	86	44.186	ENSCCAG00000019583	GPANK1	82	39.474	Cebus_capucinus
ENSSDUG00000016390	-	86	43.023	ENSCATG00000036761	GPANK1	96	34.037	Cercocebus_atys
ENSSDUG00000016390	-	98	34.908	ENSCLAG00000014639	GPANK1	95	34.383	Chinchilla_lanigera
ENSSDUG00000016390	-	86	43.191	ENSCSAG00000008570	GPANK1	83	38.361	Chlorocebus_sabaeus
ENSSDUG00000016390	-	87	44.664	ENSCPBG00000014706	GPANK1	73	42.688	Chrysemys_picta_bellii
ENSSDUG00000016390	-	86	43.191	ENSCANG00000038862	GPANK1	83	38.689	Colobus_angolensis_palliatus
ENSSDUG00000016390	-	85	41.797	ENSCGRG00001007828	Gpank1	94	32.105	Cricetulus_griseus_chok1gshd
ENSSDUG00000016390	-	85	41.797	ENSCGRG00000014676	Gpank1	97	32.105	Cricetulus_griseus_crigri
ENSSDUG00000016390	-	93	68.773	ENSCVAG00000020672	-	99	58.289	Cyprinodon_variegatus
ENSSDUG00000016390	-	87	53.150	ENSDARG00000053995	gpank1	98	42.706	Danio_rerio
ENSSDUG00000016390	-	98	34.974	ENSDNOG00000018727	GPANK1	96	34.715	Dasypus_novemcinctus
ENSSDUG00000016390	-	89	41.636	ENSDORG00000024662	Gpank1	88	35.593	Dipodomys_ordii
ENSSDUG00000016390	-	72	33.649	FBgn0034008	CG8152	62	33.649	Drosophila_melanogaster
ENSSDUG00000016390	-	85	42.969	ENSETEG00000015166	GPANK1	88	36.338	Echinops_telfairi
ENSSDUG00000016390	-	85	43.969	ENSEASG00005016313	GPANK1	70	42.969	Equus_asinus_asinus
ENSSDUG00000016390	-	85	43.969	ENSECAG00000019093	GPANK1	70	42.969	Equus_caballus
ENSSDUG00000016390	-	88	42.216	ENSELUG00000009653	-	93	41.397	Esox_lucius
ENSSDUG00000016390	-	85	44.141	ENSFCAG00000023899	GPANK1	96	35.263	Felis_catus
ENSSDUG00000016390	-	93	42.105	ENSFDAG00000018857	GPANK1	96	36.247	Fukomys_damarensis
ENSSDUG00000016390	-	98	65.724	ENSFHEG00000013343	-	98	55.467	Fundulus_heteroclitus
ENSSDUG00000016390	-	87	64.591	ENSGMOG00000007797	GPANK1	80	64.591	Gadus_morhua
ENSSDUG00000016390	-	93	70.260	ENSGAFG00000012817	-	99	61.230	Gambusia_affinis
ENSSDUG00000016390	-	94	76.471	ENSGACG00000016703	-	98	66.133	Gasterosteus_aculeatus
ENSSDUG00000016390	-	87	46.275	ENSGAGG00000011085	GPANK1	73	44.314	Gopherus_agassizii
ENSSDUG00000016390	-	99	40.816	ENSGGOG00000005539	GPANK1	96	35.000	Gorilla_gorilla
ENSSDUG00000016390	-	91	80.534	ENSHBUG00000018924	-	99	68.182	Haplochromis_burtoni
ENSSDUG00000016390	-	98	35.171	ENSHGLG00000011853	GPANK1	95	34.383	Heterocephalus_glaber_female
ENSSDUG00000016390	-	98	35.171	ENSHGLG00100018021	GPANK1	71	41.797	Heterocephalus_glaber_male
ENSSDUG00000016390	-	99	68.166	ENSHCOG00000000542	-	99	61.436	Hippocampus_comes
ENSSDUG00000016390	-	85	43.191	ENSSTOG00000024202	GPANK1	71	41.569	Ictidomys_tridecemlineatus
ENSSDUG00000016390	-	98	36.788	ENSJJAG00000015387	Gpank1	96	35.526	Jaculus_jaculus
ENSSDUG00000016390	-	97	59.375	ENSLBEG00000006109	-	97	56.053	Labrus_bergylta
ENSSDUG00000016390	-	99	64.460	ENSLBEG00000005751	GPANK1	98	55.952	Labrus_bergylta
ENSSDUG00000016390	-	88	70.196	ENSLBEG00000006075	-	89	56.150	Labrus_bergylta
ENSSDUG00000016390	-	83	37.658	ENSLACG00000008055	GPANK1	72	40.316	Latimeria_chalumnae
ENSSDUG00000016390	-	78	59.211	ENSLOCG00000008972	GPANK1	98	43.832	Lepisosteus_oculatus
ENSSDUG00000016390	-	85	42.248	ENSLAFG00000009499	GPANK1	64	40.784	Loxodonta_africana
ENSSDUG00000016390	-	86	42.636	ENSMFAG00000037562	GPANK1	83	38.361	Macaca_fascicularis
ENSSDUG00000016390	-	86	42.636	ENSMNEG00000040965	GPANK1	83	38.361	Macaca_nemestrina
ENSSDUG00000016390	-	86	43.191	ENSMLEG00000034247	GPANK1	96	34.037	Mandrillus_leucophaeus
ENSSDUG00000016390	-	96	81.522	ENSMAMG00000008470	-	99	70.667	Mastacembelus_armatus
ENSSDUG00000016390	-	91	81.298	ENSMZEG00005012135	GPANK1	99	68.449	Maylandia_zebra
ENSSDUG00000016390	-	98	35.340	ENSMAUG00000014293	Gpank1	97	33.684	Mesocricetus_auratus
ENSSDUG00000016390	-	98	34.465	ENSMICG00000037690	GPANK1	97	33.684	Microcebus_murinus
ENSSDUG00000016390	-	85	41.406	ENSMOCG00000000141	Gpank1	97	33.420	Microtus_ochrogaster
ENSSDUG00000016390	-	99	67.596	ENSMMOG00000003606	-	96	63.636	Mola_mola
ENSSDUG00000016390	-	89	41.791	ENSMODG00000015291	GPANK1	72	40.226	Monodelphis_domestica
ENSSDUG00000016390	-	99	80.139	ENSMALG00000002757	-	95	75.862	Monopterus_albus
ENSSDUG00000016390	-	85	43.359	MGP_CAROLIEiJ_G0021506	Gpank1	97	33.684	Mus_caroli
ENSSDUG00000016390	-	98	36.053	ENSMUSG00000092417	Gpank1	96	34.392	Mus_musculus
ENSSDUG00000016390	-	85	43.191	MGP_PahariEiJ_G0020501	Gpank1	97	34.908	Mus_pahari
ENSSDUG00000016390	-	85	43.750	MGP_SPRETEiJ_G0022411	Gpank1	96	34.392	Mus_spretus
ENSSDUG00000016390	-	85	42.969	ENSMPUG00000011149	GPANK1	70	41.961	Mustela_putorius_furo
ENSSDUG00000016390	-	86	43.580	ENSMLUG00000009408	GPANK1	90	35.938	Myotis_lucifugus
ENSSDUG00000016390	-	98	35.433	ENSNLEG00000006201	GPANK1	96	35.000	Nomascus_leucogenys
ENSSDUG00000016390	-	88	38.846	ENSMEUG00000004082	GPANK1	73	37.838	Notamacropus_eugenii
ENSSDUG00000016390	-	98	35.309	ENSOPRG00000012134	GPANK1	96	32.902	Ochotona_princeps
ENSSDUG00000016390	-	85	41.634	ENSODEG00000017947	GPANK1	81	37.624	Octodon_degus
ENSSDUG00000016390	-	88	35.838	ENSOCUG00000021491	GPANK1	97	34.447	Oryctolagus_cuniculus
ENSSDUG00000016390	-	99	70.035	ENSORLG00000009014	-	97	62.242	Oryzias_latipes
ENSSDUG00000016390	-	99	70.035	ENSORLG00020012082	-	99	60.372	Oryzias_latipes_hni
ENSSDUG00000016390	-	99	69.686	ENSORLG00015011561	-	99	60.428	Oryzias_latipes_hsok
ENSSDUG00000016390	-	85	42.802	ENSOGAG00000010276	GPANK1	69	40.945	Otolemur_garnettii
ENSSDUG00000016390	-	86	44.574	ENSOARG00000006913	GPANK1	93	34.737	Ovis_aries
ENSSDUG00000016390	-	98	35.958	ENSPPAG00000035166	GPANK1	96	34.737	Pan_paniscus
ENSSDUG00000016390	-	85	42.969	ENSPPRG00000001737	GPANK1	96	35.171	Panthera_pardus
ENSSDUG00000016390	-	85	42.969	ENSPTIG00000014920	GPANK1	70	41.406	Panthera_tigris_altaica
ENSSDUG00000016390	-	98	35.696	ENSPTRG00000017973	GPANK1	96	34.474	Pan_troglodytes
ENSSDUG00000016390	-	86	43.191	ENSPANG00000007625	GPANK1	96	34.037	Papio_anubis
ENSSDUG00000016390	-	86	57.143	ENSPKIG00000001197	GPANK1	91	46.307	Paramormyrops_kingsleyae
ENSSDUG00000016390	-	99	40.690	ENSPSIG00000006795	GPANK1	83	38.966	Pelodiscus_sinensis
ENSSDUG00000016390	-	91	59.848	ENSPMGG00000019843	-	98	48.806	Periophthalmus_magnuspinnatus
ENSSDUG00000016390	-	85	41.797	ENSPEMG00000014457	Gpank1	71	39.764	Peromyscus_maniculatus_bairdii
ENSSDUG00000016390	-	90	35.165	ENSPMAG00000010274	GPANK1	88	31.653	Petromyzon_marinus
ENSSDUG00000016390	-	99	33.508	ENSPCIG00000018505	GPANK1	97	32.808	Phascolarctos_cinereus
ENSSDUG00000016390	-	93	69.776	ENSPFOG00000009128	-	99	60.267	Poecilia_formosa
ENSSDUG00000016390	-	99	52.219	ENSPLAG00000007457	-	98	53.125	Poecilia_latipinna
ENSSDUG00000016390	-	93	69.776	ENSPMEG00000011187	-	99	60.533	Poecilia_mexicana
ENSSDUG00000016390	-	89	61.255	ENSPREG00000000043	-	97	49.235	Poecilia_reticulata
ENSSDUG00000016390	-	98	35.433	ENSPPYG00000016447	GPANK1	87	34.301	Pongo_abelii
ENSSDUG00000016390	-	86	35.294	ENSPCAG00000012850	GPANK1	69	35.294	Procavia_capensis
ENSSDUG00000016390	-	96	40.702	ENSPCOG00000017559	GPANK1	97	34.474	Propithecus_coquereli
ENSSDUG00000016390	-	91	80.989	ENSPNYG00000021711	GPANK1	99	68.533	Pundamilia_nyererei
ENSSDUG00000016390	-	85	44.531	ENSRNOG00000000848	Gpank1	85	40.196	Rattus_norvegicus
ENSSDUG00000016390	-	86	43.191	ENSRROG00000036770	GPANK1	96	34.565	Rhinopithecus_roxellana
ENSSDUG00000016390	-	86	43.798	ENSSBOG00000031598	GPANK1	88	36.261	Saimiri_boliviensis_boliviensis
ENSSDUG00000016390	-	94	55.516	ENSSFOG00015015696	gpank1	97	46.842	Scleropages_formosus
ENSSDUG00000016390	-	99	70.732	ENSSMAG00000021273	-	98	70.303	Scophthalmus_maximus
ENSSDUG00000016390	-	99	99.306	ENSSLDG00000022692	-	99	98.128	Seriola_lalandi_dorsalis
ENSSDUG00000016390	-	79	41.810	ENSSARG00000013203	GPANK1	63	40.000	Sorex_araneus
ENSSDUG00000016390	-	93	42.909	ENSSPUG00000017213	GPANK1	88	36.827	Sphenodon_punctatus
ENSSDUG00000016390	-	99	80.208	ENSSPAG00000023053	GPANK1	99	75.467	Stegastes_partitus
ENSSDUG00000016390	-	93	42.049	ENSSSCG00000001413	GPANK1	97	34.383	Sus_scrofa
ENSSDUG00000016390	-	90	70.611	ENSTRUG00000024606	-	98	58.777	Takifugu_rubripes
ENSSDUG00000016390	-	86	42.692	ENSTTRG00000014102	GPANK1	89	36.056	Tursiops_truncatus
ENSSDUG00000016390	-	85	42.578	ENSUAMG00000012437	GPANK1	70	41.406	Ursus_americanus
ENSSDUG00000016390	-	85	42.578	ENSUMAG00000014147	GPANK1	70	41.406	Ursus_maritimus
ENSSDUG00000016390	-	86	43.411	ENSVPAG00000002989	GPANK1	71	42.188	Vicugna_pacos
ENSSDUG00000016390	-	85	42.969	ENSVVUG00000020893	GPANK1	70	41.797	Vulpes_vulpes
ENSSDUG00000016390	-	87	43.083	ENSXETG00000002509	gpank1	88	36.311	Xenopus_tropicalis
ENSSDUG00000016390	-	87	66.023	ENSXCOG00000005699	-	77	66.023	Xiphophorus_couchianus
ENSSDUG00000016390	-	93	69.630	ENSXMAG00000026046	-	99	60.000	Xiphophorus_maculatus