EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016411 (Gene tree)
Gene ID: 111230252
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC111230252
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7471 bases
Position: chrBDQW01000260.1:1806047-1813517
Accession: 111230252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022563	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000022979	-	3516	XM_022756921	ENSSDUP00000022563	451 (aa)	XP_022612642	UPI000BBF1D29

Gene Model

Click here to download ENSSDUG00000016411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016411	si:ch211-11k18.4	98	59.101	ENSSDUG00000013457	si:dkey-98f17.5	99	59.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016411	si:ch211-11k18.4	99	59.556	ENSAPOG00000010378	si:dkey-98f17.5	100	59.556	Acanthochromis_polyacanthus
ENSSDUG00000016411	si:ch211-11k18.4	100	93.348	ENSAPOG00000018833	si:ch211-11k18.4	100	93.348	Acanthochromis_polyacanthus
ENSSDUG00000016411	si:ch211-11k18.4	99	87.556	ENSACIG00000006696	si:ch211-11k18.4	99	87.556	Amphilophus_citrinellus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.556	ENSACIG00000017719	si:dkey-98f17.5	100	59.556	Amphilophus_citrinellus
ENSSDUG00000016411	si:ch211-11k18.4	100	94.235	ENSAOCG00000014284	si:ch211-11k18.4	100	94.235	Amphiprion_ocellaris
ENSSDUG00000016411	si:ch211-11k18.4	99	59.778	ENSAOCG00000008661	si:dkey-98f17.5	100	59.778	Amphiprion_ocellaris
ENSSDUG00000016411	si:ch211-11k18.4	99	59.778	ENSAPEG00000022447	si:dkey-98f17.5	100	59.778	Amphiprion_percula
ENSSDUG00000016411	si:ch211-11k18.4	100	94.013	ENSAPEG00000014910	si:ch211-11k18.4	100	94.013	Amphiprion_percula
ENSSDUG00000016411	si:ch211-11k18.4	100	91.131	ENSATEG00000004775	si:ch211-11k18.4	100	91.131	Anabas_testudineus
ENSSDUG00000016411	si:ch211-11k18.4	99	60.444	ENSATEG00000007188	si:dkey-98f17.5	100	60.444	Anabas_testudineus
ENSSDUG00000016411	si:ch211-11k18.4	98	64.798	ENSACAG00000028632	-	98	64.653	Anolis_carolinensis
ENSSDUG00000016411	si:ch211-11k18.4	99	59.778	ENSACLG00000001308	si:dkey-98f17.5	100	59.778	Astatotilapia_calliptera
ENSSDUG00000016411	si:ch211-11k18.4	100	90.466	ENSACLG00000007907	si:ch211-11k18.4	100	90.466	Astatotilapia_calliptera
ENSSDUG00000016411	si:ch211-11k18.4	99	82.889	ENSAMXG00000017817	si:ch211-11k18.4	100	82.889	Astyanax_mexicanus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.333	ENSAMXG00000001190	si:dkey-98f17.5	100	59.333	Astyanax_mexicanus
ENSSDUG00000016411	si:ch211-11k18.4	83	62.698	ENSCING00000020807	-	99	62.698	Ciona_intestinalis
ENSSDUG00000016411	si:ch211-11k18.4	99	58.444	ENSCSAVG00000009987	-	100	58.444	Ciona_savignyi
ENSSDUG00000016411	si:ch211-11k18.4	99	60.000	ENSCSEG00000017512	si:dkey-98f17.5	95	61.463	Cynoglossus_semilaevis
ENSSDUG00000016411	si:ch211-11k18.4	100	85.588	ENSCSEG00000017661	si:ch211-11k18.4	100	85.588	Cynoglossus_semilaevis
ENSSDUG00000016411	si:ch211-11k18.4	99	60.000	ENSCVAG00000011351	si:dkey-98f17.5	100	59.778	Cyprinodon_variegatus
ENSSDUG00000016411	si:ch211-11k18.4	100	90.022	ENSCVAG00000015346	si:ch211-11k18.4	100	90.022	Cyprinodon_variegatus
ENSSDUG00000016411	si:ch211-11k18.4	99	84.889	ENSDARG00000087869	si:ch211-11k18.4	100	90.816	Danio_rerio
ENSSDUG00000016411	si:ch211-11k18.4	98	60.091	ENSDARG00000068863	si:dkey-98f17.5	100	59.864	Danio_rerio
ENSSDUG00000016411	si:ch211-11k18.4	79	59.718	ENSEBUG00000007620	si:dkey-98f17.5	95	59.718	Eptatretus_burgeri
ENSSDUG00000016411	si:ch211-11k18.4	99	59.202	ENSELUG00000003365	si:dkey-98f17.5	100	59.202	Esox_lucius
ENSSDUG00000016411	si:ch211-11k18.4	99	59.333	ENSFHEG00000012744	si:dkey-98f17.5	100	59.333	Fundulus_heteroclitus
ENSSDUG00000016411	si:ch211-11k18.4	100	88.027	ENSFHEG00000019820	si:ch211-11k18.4	100	88.027	Fundulus_heteroclitus
ENSSDUG00000016411	si:ch211-11k18.4	90	80.446	ENSGMOG00000003492	si:ch211-11k18.4	100	80.446	Gadus_morhua
ENSSDUG00000016411	si:ch211-11k18.4	99	59.111	ENSGAFG00000012362	si:dkey-98f17.5	89	59.111	Gambusia_affinis
ENSSDUG00000016411	si:ch211-11k18.4	100	87.140	ENSGAFG00000005677	si:ch211-11k18.4	100	87.140	Gambusia_affinis
ENSSDUG00000016411	si:ch211-11k18.4	58	73.462	ENSGACG00000009399	si:dkey-98f17.5	100	73.462	Gasterosteus_aculeatus
ENSSDUG00000016411	si:ch211-11k18.4	90	89.604	ENSGACG00000013134	si:ch211-11k18.4	100	89.604	Gasterosteus_aculeatus
ENSSDUG00000016411	si:ch211-11k18.4	99	60.000	ENSHBUG00000008331	si:dkey-98f17.5	100	60.000	Haplochromis_burtoni
ENSSDUG00000016411	si:ch211-11k18.4	100	90.687	ENSHBUG00000020638	si:ch211-11k18.4	100	90.687	Haplochromis_burtoni
ENSSDUG00000016411	si:ch211-11k18.4	99	88.444	ENSHCOG00000014773	si:ch211-11k18.4	100	88.444	Hippocampus_comes
ENSSDUG00000016411	si:ch211-11k18.4	99	57.175	ENSHCOG00000016505	si:dkey-98f17.5	98	56.951	Hippocampus_comes
ENSSDUG00000016411	si:ch211-11k18.4	99	57.301	ENSIPUG00000019981	si:dkey-98f17.5	100	56.858	Ictalurus_punctatus
ENSSDUG00000016411	si:ch211-11k18.4	96	78.704	ENSIPUG00000016678	si:ch211-11k18.4	99	79.167	Ictalurus_punctatus
ENSSDUG00000016411	si:ch211-11k18.4	90	68.812	ENSIPUG00000016694	si:ch211-11k18.4	89	68.812	Ictalurus_punctatus
ENSSDUG00000016411	si:ch211-11k18.4	99	58.444	ENSKMAG00000014997	si:dkey-98f17.5	100	58.444	Kryptolebias_marmoratus
ENSSDUG00000016411	si:ch211-11k18.4	99	89.333	ENSKMAG00000009327	si:ch211-11k18.4	99	89.333	Kryptolebias_marmoratus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.556	ENSLBEG00000012756	si:dkey-98f17.5	100	59.556	Labrus_bergylta
ENSSDUG00000016411	si:ch211-11k18.4	99	71.397	ENSLACG00000006280	si:ch211-11k18.4	100	71.397	Latimeria_chalumnae
ENSSDUG00000016411	si:ch211-11k18.4	99	62.444	ENSLACG00000004899	-	99	62.444	Latimeria_chalumnae
ENSSDUG00000016411	si:ch211-11k18.4	98	60.045	ENSLACG00000017433	si:dkey-98f17.5	97	60.045	Latimeria_chalumnae
ENSSDUG00000016411	si:ch211-11k18.4	99	58.758	ENSLOCG00000003824	si:dkey-98f17.5	99	58.758	Lepisosteus_oculatus
ENSSDUG00000016411	si:ch211-11k18.4	96	92.361	ENSMAMG00000002536	si:ch211-11k18.4	99	92.361	Mastacembelus_armatus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.556	ENSMAMG00000014528	si:dkey-98f17.5	100	59.556	Mastacembelus_armatus
ENSSDUG00000016411	si:ch211-11k18.4	100	90.244	ENSMZEG00005008941	si:ch211-11k18.4	100	90.244	Maylandia_zebra
ENSSDUG00000016411	si:ch211-11k18.4	99	60.000	ENSMZEG00005016572	si:dkey-98f17.5	100	60.000	Maylandia_zebra
ENSSDUG00000016411	si:ch211-11k18.4	100	82.927	ENSMMOG00000012485	si:ch211-11k18.4	100	82.927	Mola_mola
ENSSDUG00000016411	si:ch211-11k18.4	98	59.773	ENSMALG00000012761	si:dkey-98f17.5	100	60.227	Monopterus_albus
ENSSDUG00000016411	si:ch211-11k18.4	100	90.022	ENSMALG00000019735	si:ch211-11k18.4	100	90.022	Monopterus_albus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.911	ENSNBRG00000006068	si:dkey-98f17.5	100	59.911	Neolamprologus_brichardi
ENSSDUG00000016411	si:ch211-11k18.4	96	90.278	ENSNBRG00000002220	si:ch211-11k18.4	98	90.278	Neolamprologus_brichardi
ENSSDUG00000016411	si:ch211-11k18.4	100	90.244	ENSONIG00000019412	si:ch211-11k18.4	100	90.244	Oreochromis_niloticus
ENSSDUG00000016411	si:ch211-11k18.4	99	60.222	ENSONIG00000013568	si:dkey-98f17.5	100	60.222	Oreochromis_niloticus
ENSSDUG00000016411	si:ch211-11k18.4	91	60.244	ENSORLG00000007958	si:dkey-98f17.5	95	60.244	Oryzias_latipes
ENSSDUG00000016411	si:ch211-11k18.4	100	86.918	ENSORLG00000012015	si:ch211-11k18.4	100	86.918	Oryzias_latipes
ENSSDUG00000016411	si:ch211-11k18.4	100	86.475	ENSORLG00020012386	si:ch211-11k18.4	100	86.475	Oryzias_latipes_hni
ENSSDUG00000016411	si:ch211-11k18.4	99	58.889	ENSORLG00020013350	si:dkey-98f17.5	100	58.889	Oryzias_latipes_hni
ENSSDUG00000016411	si:ch211-11k18.4	99	58.889	ENSORLG00015002000	si:dkey-98f17.5	100	58.889	Oryzias_latipes_hsok
ENSSDUG00000016411	si:ch211-11k18.4	100	87.361	ENSORLG00015022862	si:ch211-11k18.4	100	87.361	Oryzias_latipes_hsok
ENSSDUG00000016411	si:ch211-11k18.4	100	88.470	ENSOMEG00000018686	si:ch211-11k18.4	100	88.470	Oryzias_melastigma
ENSSDUG00000016411	si:ch211-11k18.4	99	60.089	ENSOMEG00000003154	si:dkey-98f17.5	100	60.183	Oryzias_melastigma
ENSSDUG00000016411	si:ch211-11k18.4	99	81.111	ENSPKIG00000018807	si:ch211-11k18.4	100	81.111	Paramormyrops_kingsleyae
ENSSDUG00000016411	si:ch211-11k18.4	99	60.222	ENSPKIG00000024621	si:dkey-98f17.5	100	60.222	Paramormyrops_kingsleyae
ENSSDUG00000016411	si:ch211-11k18.4	99	76.889	ENSPKIG00000023918	-	98	76.889	Paramormyrops_kingsleyae
ENSSDUG00000016411	si:ch211-11k18.4	100	88.248	ENSPMGG00000016507	si:ch211-11k18.4	100	88.248	Periophthalmus_magnuspinnatus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.778	ENSPMGG00000019065	si:dkey-98f17.5	100	59.778	Periophthalmus_magnuspinnatus
ENSSDUG00000016411	si:ch211-11k18.4	100	88.914	ENSPFOG00000007976	si:ch211-11k18.4	100	88.914	Poecilia_formosa
ENSSDUG00000016411	si:ch211-11k18.4	99	59.382	ENSPFOG00000015142	si:dkey-98f17.5	100	59.382	Poecilia_formosa
ENSSDUG00000016411	si:ch211-11k18.4	99	59.333	ENSPLAG00000003709	si:dkey-98f17.5	100	59.333	Poecilia_latipinna
ENSSDUG00000016411	si:ch211-11k18.4	100	88.914	ENSPLAG00000019794	si:ch211-11k18.4	100	88.914	Poecilia_latipinna
ENSSDUG00000016411	si:ch211-11k18.4	100	88.692	ENSPMEG00000024198	si:ch211-11k18.4	100	88.692	Poecilia_mexicana
ENSSDUG00000016411	si:ch211-11k18.4	99	59.333	ENSPMEG00000018709	si:dkey-98f17.5	94	59.333	Poecilia_mexicana
ENSSDUG00000016411	si:ch211-11k18.4	98	60.000	ENSPREG00000000708	si:dkey-98f17.5	100	60.000	Poecilia_reticulata
ENSSDUG00000016411	si:ch211-11k18.4	93	83.529	ENSPREG00000015319	si:ch211-11k18.4	97	83.529	Poecilia_reticulata
ENSSDUG00000016411	si:ch211-11k18.4	99	60.000	ENSPNYG00000017266	si:dkey-98f17.5	100	60.000	Pundamilia_nyererei
ENSSDUG00000016411	si:ch211-11k18.4	100	90.466	ENSPNYG00000017099	si:ch211-11k18.4	100	90.466	Pundamilia_nyererei
ENSSDUG00000016411	si:ch211-11k18.4	99	84.633	ENSPNAG00000022138	si:ch211-11k18.4	99	84.633	Pygocentrus_nattereri
ENSSDUG00000016411	si:ch211-11k18.4	99	58.889	ENSPNAG00000021352	si:dkey-98f17.5	100	58.889	Pygocentrus_nattereri
ENSSDUG00000016411	si:ch211-11k18.4	99	58.150	ENSSFOG00015017965	si:dkey-98f17.5	100	58.057	Scleropages_formosus
ENSSDUG00000016411	si:ch211-11k18.4	99	78.174	ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	Scleropages_formosus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.333	ENSSMAG00000011905	si:dkey-98f17.5	100	59.333	Scophthalmus_maximus
ENSSDUG00000016411	si:ch211-11k18.4	100	92.905	ENSSMAG00000009651	si:ch211-11k18.4	100	92.905	Scophthalmus_maximus
ENSSDUG00000016411	si:ch211-11k18.4	100	99.557	ENSSLDG00000019145	si:ch211-11k18.4	100	99.557	Seriola_lalandi_dorsalis
ENSSDUG00000016411	si:ch211-11k18.4	98	58.876	ENSSLDG00000025395	si:dkey-98f17.5	99	58.876	Seriola_lalandi_dorsalis
ENSSDUG00000016411	si:ch211-11k18.4	87	65.482	ENSSPUG00000010096	-	99	65.482	Sphenodon_punctatus
ENSSDUG00000016411	si:ch211-11k18.4	99	60.000	ENSSPAG00000018800	si:dkey-98f17.5	100	59.778	Stegastes_partitus
ENSSDUG00000016411	si:ch211-11k18.4	100	92.683	ENSSPAG00000010697	si:ch211-11k18.4	100	92.683	Stegastes_partitus
ENSSDUG00000016411	si:ch211-11k18.4	100	88.027	ENSTRUG00000020291	si:ch211-11k18.4	100	88.027	Takifugu_rubripes
ENSSDUG00000016411	si:ch211-11k18.4	99	58.889	ENSTRUG00000021287	si:dkey-98f17.5	100	58.889	Takifugu_rubripes
ENSSDUG00000016411	si:ch211-11k18.4	99	66.372	ENSXETG00000031783	-	99	66.372	Xenopus_tropicalis
ENSSDUG00000016411	si:ch211-11k18.4	100	83.592	ENSXCOG00000018094	si:ch211-11k18.4	100	83.186	Xiphophorus_couchianus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.688	ENSXCOG00000017002	si:dkey-98f17.5	100	59.688	Xiphophorus_couchianus
ENSSDUG00000016411	si:ch211-11k18.4	100	89.135	ENSXMAG00000021235	si:ch211-11k18.4	100	89.135	Xiphophorus_maculatus
ENSSDUG00000016411	si:ch211-11k18.4	99	59.333	ENSXMAG00000007688	si:dkey-98f17.5	95	59.111	Xiphophorus_maculatus