EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016436 (Gene tree)
Gene ID: 111232380
Gene Symbol: ehd1a
Alias: zgc:77049
Full Name: EH domain-containing protein 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 14053 bases
Position: chrBDQW01000331.1:2311460-2325512
Accession: 111232380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022585	MMR_HSR1	PF01926.23	8.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023000	-	3001	XM_022759873	ENSSDUP00000022585	532 (aa)	XP_022615594	UPI000BBE5AB9

Gene Model

Click here to download ENSSDUG00000016436's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016436	ehd1a	98	61.017	ENSSDUG00000020042	-	98	60.788
ENSSDUG00000016436	ehd1a	98	85.496	ENSSDUG00000010820	ehd3	98	85.496
ENSSDUG00000016436	ehd1a	98	77.071	ENSSDUG00000010947	ehd4	95	77.071
ENSSDUG00000016436	ehd1a	98	70.644	ENSSDUG00000000141	ehd2b	98	71.212
ENSSDUG00000016436	ehd1a	70	32.474	ENSSDUG00000010808	srl	85	32.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016436	ehd1a	98	88.846	ENSG00000110047	EHD1	100	94.444	Homo_sapiens
ENSSDUG00000016436	ehd1a	100	96.429	ENSAPOG00000013440	ehd1a	100	96.429	Acanthochromis_polyacanthus
ENSSDUG00000016436	ehd1a	98	88.077	ENSAMEG00000017785	EHD1	94	88.077	Ailuropoda_melanoleuca
ENSSDUG00000016436	ehd1a	99	98.302	ENSACIG00000022182	ehd1a	99	98.302	Amphilophus_citrinellus
ENSSDUG00000016436	ehd1a	99	96.234	ENSAOCG00000016322	ehd1a	99	96.234	Amphiprion_ocellaris
ENSSDUG00000016436	ehd1a	99	96.234	ENSAPEG00000010363	ehd1a	99	96.234	Amphiprion_percula
ENSSDUG00000016436	ehd1a	99	95.292	ENSATEG00000013980	ehd1a	99	95.292	Anabas_testudineus
ENSSDUG00000016436	ehd1a	98	88.654	ENSANAG00000034810	EHD1	97	88.654	Aotus_nancymaae
ENSSDUG00000016436	ehd1a	99	97.547	ENSACLG00000016016	ehd1a	99	97.547	Astatotilapia_calliptera
ENSSDUG00000016436	ehd1a	99	91.619	ENSAMXG00000039344	ehd1a	98	91.619	Astyanax_mexicanus
ENSSDUG00000016436	ehd1a	98	86.832	ENSAMXG00000031892	-	98	86.832	Astyanax_mexicanus
ENSSDUG00000016436	ehd1a	98	88.846	ENSBTAG00000050712	EHD1	97	88.846	Bos_taurus
ENSSDUG00000016436	ehd1a	98	68.302	WBGene00004373	rme-1	95	68.302	Caenorhabditis_elegans
ENSSDUG00000016436	ehd1a	98	88.462	ENSCJAG00000002660	EHD1	97	88.462	Callithrix_jacchus
ENSSDUG00000016436	ehd1a	77	88.808	ENSCAFG00000014128	EHD1	90	88.416	Canis_familiaris
ENSSDUG00000016436	ehd1a	98	88.654	ENSCAFG00020014846	EHD1	97	88.654	Canis_lupus_dingo
ENSSDUG00000016436	ehd1a	98	88.846	ENSCHIG00000020707	-	97	88.846	Capra_hircus
ENSSDUG00000016436	ehd1a	98	88.654	ENSCPOG00000008157	EHD1	97	88.654	Cavia_porcellus
ENSSDUG00000016436	ehd1a	98	88.654	ENSCCAG00000004590	EHD1	97	88.654	Cebus_capucinus
ENSSDUG00000016436	ehd1a	98	88.654	ENSCATG00000010658	EHD1	95	88.654	Cercocebus_atys
ENSSDUG00000016436	ehd1a	98	88.654	ENSCLAG00000016412	EHD1	97	88.654	Chinchilla_lanigera
ENSSDUG00000016436	ehd1a	98	88.846	ENSCSAG00000007397	EHD1	97	88.846	Chlorocebus_sabaeus
ENSSDUG00000016436	ehd1a	97	87.066	ENSCPBG00000023692	EHD1	96	87.066	Chrysemys_picta_bellii
ENSSDUG00000016436	ehd1a	98	88.846	ENSCANG00000042123	EHD1	97	88.846	Colobus_angolensis_palliatus
ENSSDUG00000016436	ehd1a	98	88.654	ENSCGRG00001019701	Ehd1	97	88.654	Cricetulus_griseus_chok1gshd
ENSSDUG00000016436	ehd1a	94	88.000	ENSCGRG00000000662	Ehd1	99	88.000	Cricetulus_griseus_crigri
ENSSDUG00000016436	ehd1a	99	93.585	ENSCSEG00000006078	ehd1a	99	93.585	Cynoglossus_semilaevis
ENSSDUG00000016436	ehd1a	100	96.053	ENSCVAG00000012152	ehd1a	100	96.053	Cyprinodon_variegatus
ENSSDUG00000016436	ehd1a	98	91.731	ENSDARG00000014793	ehd1b	98	91.731	Danio_rerio
ENSSDUG00000016436	ehd1a	98	90.962	ENSDARG00000098853	ehd1a	98	90.962	Danio_rerio
ENSSDUG00000016436	ehd1a	66	90.258	ENSDNOG00000017834	EHD1	93	90.258	Dasypus_novemcinctus
ENSSDUG00000016436	ehd1a	98	88.654	ENSDORG00000030186	Ehd1	97	88.654	Dipodomys_ordii
ENSSDUG00000016436	ehd1a	99	69.376	FBgn0016693	Past1	99	69.376	Drosophila_melanogaster
ENSSDUG00000016436	ehd1a	58	80.456	ENSEBUG00000010829	EHD1	89	80.456	Eptatretus_burgeri
ENSSDUG00000016436	ehd1a	98	77.159	ENSEBUG00000009968	EHD1	97	77.159	Eptatretus_burgeri
ENSSDUG00000016436	ehd1a	98	89.231	ENSEASG00005018250	EHD1	97	89.231	Equus_asinus_asinus
ENSSDUG00000016436	ehd1a	98	89.231	ENSECAG00000011638	EHD1	97	89.231	Equus_caballus
ENSSDUG00000016436	ehd1a	99	91.098	ENSELUG00000016093	ehd1b	100	91.098	Esox_lucius
ENSSDUG00000016436	ehd1a	99	90.892	ENSELUG00000007973	-	99	90.892	Esox_lucius
ENSSDUG00000016436	ehd1a	98	89.038	ENSFCAG00000027734	EHD1	95	89.038	Felis_catus
ENSSDUG00000016436	ehd1a	98	88.654	ENSFDAG00000007697	EHD1	97	88.654	Fukomys_damarensis
ENSSDUG00000016436	ehd1a	99	96.774	ENSFHEG00000002690	ehd1a	99	96.774	Fundulus_heteroclitus
ENSSDUG00000016436	ehd1a	99	95.057	ENSGMOG00000012192	ehd1a	100	95.057	Gadus_morhua
ENSSDUG00000016436	ehd1a	100	97.186	ENSGAFG00000000730	ehd1a	100	97.186	Gambusia_affinis
ENSSDUG00000016436	ehd1a	100	95.677	ENSGACG00000017605	ehd1a	100	95.677	Gasterosteus_aculeatus
ENSSDUG00000016436	ehd1a	98	87.885	ENSGAGG00000001677	-	90	87.885	Gopherus_agassizii
ENSSDUG00000016436	ehd1a	99	97.358	ENSHBUG00000012087	ehd1a	99	97.358	Haplochromis_burtoni
ENSSDUG00000016436	ehd1a	98	88.654	ENSHGLG00000010254	EHD1	97	88.654	Heterocephalus_glaber_female
ENSSDUG00000016436	ehd1a	98	88.654	ENSHGLG00100014206	EHD1	97	88.654	Heterocephalus_glaber_male
ENSSDUG00000016436	ehd1a	100	93.609	ENSHCOG00000006825	ehd1a	100	93.609	Hippocampus_comes
ENSSDUG00000016436	ehd1a	99	92.614	ENSIPUG00000002819	ehd1a	99	92.614	Ictalurus_punctatus
ENSSDUG00000016436	ehd1a	98	87.524	ENSIPUG00000017390	EHD1	98	87.356	Ictalurus_punctatus
ENSSDUG00000016436	ehd1a	98	88.846	ENSSTOG00000009829	EHD1	97	88.846	Ictidomys_tridecemlineatus
ENSSDUG00000016436	ehd1a	98	88.269	ENSJJAG00000022299	Ehd1	97	88.269	Jaculus_jaculus
ENSSDUG00000016436	ehd1a	100	95.865	ENSKMAG00000004764	ehd1a	100	95.865	Kryptolebias_marmoratus
ENSSDUG00000016436	ehd1a	100	96.617	ENSLBEG00000004390	ehd1a	100	96.617	Labrus_bergylta
ENSSDUG00000016436	ehd1a	98	87.356	ENSLACG00000018148	EHD1	97	87.356	Latimeria_chalumnae
ENSSDUG00000016436	ehd1a	98	84.837	ENSLOCG00000000924	ehd1b	94	84.512	Lepisosteus_oculatus
ENSSDUG00000016436	ehd1a	98	86.154	ENSLAFG00000011643	EHD1	97	86.154	Loxodonta_africana
ENSSDUG00000016436	ehd1a	98	88.846	ENSMFAG00000032608	EHD1	97	88.846	Macaca_fascicularis
ENSSDUG00000016436	ehd1a	98	88.846	ENSMMUG00000003972	EHD1	95	88.846	Macaca_mulatta
ENSSDUG00000016436	ehd1a	98	88.846	ENSMNEG00000031673	EHD1	97	88.846	Macaca_nemestrina
ENSSDUG00000016436	ehd1a	98	88.846	ENSMLEG00000031992	EHD1	97	88.846	Mandrillus_leucophaeus
ENSSDUG00000016436	ehd1a	99	96.798	ENSMAMG00000021737	ehd1a	99	96.798	Mastacembelus_armatus
ENSSDUG00000016436	ehd1a	99	97.547	ENSMZEG00005004305	ehd1a	99	97.547	Maylandia_zebra
ENSSDUG00000016436	ehd1a	98	88.654	ENSMAUG00000013823	Ehd1	97	88.654	Mesocricetus_auratus
ENSSDUG00000016436	ehd1a	98	88.654	ENSMICG00000001239	EHD1	96	88.657	Microcebus_murinus
ENSSDUG00000016436	ehd1a	98	88.654	ENSMOCG00000015517	Ehd1	97	88.654	Microtus_ochrogaster
ENSSDUG00000016436	ehd1a	99	95.104	ENSMMOG00000003005	ehd1a	100	95.104	Mola_mola
ENSSDUG00000016436	ehd1a	99	96.234	ENSMALG00000012679	ehd1a	99	96.234	Monopterus_albus
ENSSDUG00000016436	ehd1a	98	88.462	MGP_CAROLIEiJ_G0022603	Ehd1	97	88.462	Mus_caroli
ENSSDUG00000016436	ehd1a	98	88.462	ENSMUSG00000024772	Ehd1	97	88.462	Mus_musculus
ENSSDUG00000016436	ehd1a	98	88.269	MGP_PahariEiJ_G0014097	Ehd1	97	88.269	Mus_pahari
ENSSDUG00000016436	ehd1a	98	88.462	MGP_SPRETEiJ_G0023514	Ehd1	97	88.462	Mus_spretus
ENSSDUG00000016436	ehd1a	98	88.846	ENSMPUG00000012497	EHD1	97	88.846	Mustela_putorius_furo
ENSSDUG00000016436	ehd1a	98	88.654	ENSNGAG00000020358	Ehd1	97	88.654	Nannospalax_galili
ENSSDUG00000016436	ehd1a	99	96.981	ENSNBRG00000002933	ehd1a	99	96.981	Neolamprologus_brichardi
ENSSDUG00000016436	ehd1a	98	88.846	ENSNLEG00000005375	EHD1	97	88.846	Nomascus_leucogenys
ENSSDUG00000016436	ehd1a	98	88.077	ENSOPRG00000011350	EHD1	97	88.077	Ochotona_princeps
ENSSDUG00000016436	ehd1a	98	88.846	ENSODEG00000014527	EHD1	97	88.846	Octodon_degus
ENSSDUG00000016436	ehd1a	59	91.693	ENSOCUG00000029532	EHD1	92	91.693	Oryctolagus_cuniculus
ENSSDUG00000016436	ehd1a	100	94.737	ENSORLG00000022561	ehd1a	100	94.737	Oryzias_latipes
ENSSDUG00000016436	ehd1a	100	94.549	ENSORLG00020018451	ehd1a	100	94.549	Oryzias_latipes_hni
ENSSDUG00000016436	ehd1a	100	94.549	ENSORLG00015017672	ehd1a	100	94.549	Oryzias_latipes_hsok
ENSSDUG00000016436	ehd1a	100	95.113	ENSOMEG00000019329	ehd1a	100	95.113	Oryzias_melastigma
ENSSDUG00000016436	ehd1a	98	88.654	ENSOGAG00000009351	EHD1	97	88.654	Otolemur_garnettii
ENSSDUG00000016436	ehd1a	91	89.485	ENSOARG00000010447	EHD1	99	89.485	Ovis_aries
ENSSDUG00000016436	ehd1a	98	88.846	ENSPPAG00000037178	EHD1	97	88.846	Pan_paniscus
ENSSDUG00000016436	ehd1a	98	86.731	ENSPPRG00000006031	EHD1	95	86.731	Panthera_pardus
ENSSDUG00000016436	ehd1a	98	88.846	ENSPTRG00000003851	EHD1	95	88.846	Pan_troglodytes
ENSSDUG00000016436	ehd1a	98	88.846	ENSPANG00000023358	EHD1	95	88.846	Papio_anubis
ENSSDUG00000016436	ehd1a	99	89.354	ENSPKIG00000023165	-	99	89.354	Paramormyrops_kingsleyae
ENSSDUG00000016436	ehd1a	68	92.562	ENSPKIG00000020297	-	88	92.562	Paramormyrops_kingsleyae
ENSSDUG00000016436	ehd1a	98	88.269	ENSPSIG00000005727	EHD1	97	88.269	Pelodiscus_sinensis
ENSSDUG00000016436	ehd1a	99	95.238	ENSPMGG00000017810	ehd1a	99	94.717	Periophthalmus_magnuspinnatus
ENSSDUG00000016436	ehd1a	98	88.654	ENSPEMG00000010917	Ehd1	97	88.654	Peromyscus_maniculatus_bairdii
ENSSDUG00000016436	ehd1a	72	70.604	ENSPCIG00000017053	-	94	70.604	Phascolarctos_cinereus
ENSSDUG00000016436	ehd1a	98	88.654	ENSPCIG00000014850	EHD1	97	88.654	Phascolarctos_cinereus
ENSSDUG00000016436	ehd1a	99	97.529	ENSPFOG00000010613	ehd1a	98	97.529	Poecilia_formosa
ENSSDUG00000016436	ehd1a	99	97.529	ENSPLAG00000023296	ehd1a	99	97.529	Poecilia_latipinna
ENSSDUG00000016436	ehd1a	99	97.719	ENSPMEG00000003397	ehd1a	99	97.719	Poecilia_mexicana
ENSSDUG00000016436	ehd1a	99	97.529	ENSPREG00000015893	ehd1a	99	97.529	Poecilia_reticulata
ENSSDUG00000016436	ehd1a	98	88.846	ENSPPYG00000003093	EHD1	97	88.846	Pongo_abelii
ENSSDUG00000016436	ehd1a	98	88.654	ENSPCOG00000010309	EHD1	97	88.654	Propithecus_coquereli
ENSSDUG00000016436	ehd1a	98	88.654	ENSPVAG00000007890	EHD1	97	88.654	Pteropus_vampyrus
ENSSDUG00000016436	ehd1a	99	97.358	ENSPNYG00000015448	ehd1a	99	97.358	Pundamilia_nyererei
ENSSDUG00000016436	ehd1a	99	91.493	ENSPNAG00000023091	ehd1a	99	91.493	Pygocentrus_nattereri
ENSSDUG00000016436	ehd1a	99	89.714	ENSPNAG00000007408	EHD1	99	89.714	Pygocentrus_nattereri
ENSSDUG00000016436	ehd1a	98	88.462	ENSRNOG00000043503	Ehd1	97	88.462	Rattus_norvegicus
ENSSDUG00000016436	ehd1a	98	88.846	ENSRBIG00000039111	EHD1	97	88.846	Rhinopithecus_bieti
ENSSDUG00000016436	ehd1a	98	88.846	ENSRROG00000026366	EHD1	97	88.846	Rhinopithecus_roxellana
ENSSDUG00000016436	ehd1a	98	88.654	ENSSBOG00000023399	EHD1	97	88.654	Saimiri_boliviensis_boliviensis
ENSSDUG00000016436	ehd1a	73	70.000	ENSSHAG00000007430	-	93	68.657	Sarcophilus_harrisii
ENSSDUG00000016436	ehd1a	91	91.152	ENSSFOG00015019587	EHD1	99	91.152	Scleropages_formosus
ENSSDUG00000016436	ehd1a	98	93.090	ENSSFOG00015006481	-	98	93.090	Scleropages_formosus
ENSSDUG00000016436	ehd1a	100	96.429	ENSSMAG00000018210	ehd1a	100	96.429	Scophthalmus_maximus
ENSSDUG00000016436	ehd1a	100	100.000	ENSSLDG00000015328	ehd1a	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000016436	ehd1a	99	97.732	ENSSPAG00000008682	ehd1a	99	97.732	Stegastes_partitus
ENSSDUG00000016436	ehd1a	98	88.654	ENSSSCG00000013017	EHD1	97	88.654	Sus_scrofa
ENSSDUG00000016436	ehd1a	100	95.301	ENSTRUG00000025890	ehd1a	99	95.301	Takifugu_rubripes
ENSSDUG00000016436	ehd1a	99	95.463	ENSTNIG00000016792	ehd1a	98	95.463	Tetraodon_nigroviridis
ENSSDUG00000016436	ehd1a	76	80.542	ENSTBEG00000007057	EHD1	98	80.542	Tupaia_belangeri
ENSSDUG00000016436	ehd1a	98	87.885	ENSTTRG00000008887	EHD1	97	87.885	Tursiops_truncatus
ENSSDUG00000016436	ehd1a	98	88.654	ENSUAMG00000012071	EHD1	97	88.654	Ursus_americanus
ENSSDUG00000016436	ehd1a	98	86.717	ENSUMAG00000007890	EHD1	98	87.548	Ursus_maritimus
ENSSDUG00000016436	ehd1a	98	88.654	ENSVVUG00000027552	EHD1	82	88.654	Vulpes_vulpes
ENSSDUG00000016436	ehd1a	98	86.923	ENSXETG00000001638	ehd1	97	86.923	Xenopus_tropicalis
ENSSDUG00000016436	ehd1a	99	96.241	ENSXCOG00000001781	ehd1a	99	96.241	Xiphophorus_couchianus
ENSSDUG00000016436	ehd1a	100	96.623	ENSXMAG00000005301	ehd1a	100	96.623	Xiphophorus_maculatus