EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016450 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 271-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7888 bases
Position: chrBDQW01000035.1:2275722-2283609
Accession: 111216545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	1	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	2	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	3	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	4	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	5	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	6	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	7	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	8	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	9	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	10	11
ENSSDUP00000022589	zf-C2H2	PF00096.26	9.1e-67	11	11
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	1	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	2	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	3	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	4	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	5	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	6	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	7	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	8	9
ENSSDUP00000022606	zf-C2H2	PF00096.26	4.1e-45	9	9
ENSSDUP00000022589	zf-met	PF12874.7	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023004	-	6636	XM_022738072	ENSSDUP00000022589	1001 (aa)	XP_022593793	-
ENSSDUT00000023021	-	1752	-	ENSSDUP00000022606	583 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016450	-	71	39.560	ENSSDUG00000006426	-	97	42.718
ENSSDUG00000016450	-	73	42.661	ENSSDUG00000015191	-	88	42.661
ENSSDUG00000016450	-	67	38.214	ENSSDUG00000015013	-	62	39.179
ENSSDUG00000016450	-	59	42.593	ENSSDUG00000012926	-	69	42.593
ENSSDUG00000016450	-	50	34.574	ENSSDUG00000001918	znf366	54	31.126
ENSSDUG00000016450	-	67	47.500	ENSSDUG00000009439	-	90	46.154
ENSSDUG00000016450	-	52	41.463	ENSSDUG00000001263	-	99	41.463
ENSSDUG00000016450	-	67	37.209	ENSSDUG00000015254	-	96	41.060
ENSSDUG00000016450	-	64	31.447	ENSSDUG00000004892	-	92	32.768
ENSSDUG00000016450	-	67	39.456	ENSSDUG00000020810	-	87	37.975
ENSSDUG00000016450	-	55	46.154	ENSSDUG00000010584	sall3b	60	46.154
ENSSDUG00000016450	-	73	46.154	ENSSDUG00000023764	-	96	46.154
ENSSDUG00000016450	-	73	37.273	ENSSDUG00000006463	-	85	37.273
ENSSDUG00000016450	-	66	40.000	ENSSDUG00000004089	-	96	37.500
ENSSDUG00000016450	-	66	38.421	ENSSDUG00000022412	znf648	74	38.421
ENSSDUG00000016450	-	60	44.578	ENSSDUG00000022914	-	61	44.578
ENSSDUG00000016450	-	66	42.975	ENSSDUG00000008329	-	89	42.975
ENSSDUG00000016450	-	66	39.912	ENSSDUG00000015204	-	96	39.912
ENSSDUG00000016450	-	76	33.182	ENSSDUG00000020397	prdm5	75	32.802
ENSSDUG00000016450	-	73	43.689	ENSSDUG00000011170	znf236	62	34.821
ENSSDUG00000016450	-	73	36.859	ENSSDUG00000000799	-	74	36.859
ENSSDUG00000016450	-	58	43.571	ENSSDUG00000023765	-	89	52.500
ENSSDUG00000016450	-	64	45.370	ENSSDUG00000009553	-	60	45.370
ENSSDUG00000016450	-	66	40.789	ENSSDUG00000015182	-	68	42.708
ENSSDUG00000016450	-	73	46.835	ENSSDUG00000013904	-	86	40.079
ENSSDUG00000016450	-	73	44.000	ENSSDUG00000005401	-	94	41.860
ENSSDUG00000016450	-	73	32.026	ENSSDUG00000006740	-	92	35.616
ENSSDUG00000016450	-	84	33.333	ENSSDUG00000021415	si:ch211-216l23.1	81	30.131
ENSSDUG00000016450	-	74	48.214	ENSSDUG00000022035	-	67	50.847
ENSSDUG00000016450	-	66	43.972	ENSSDUG00000004650	-	98	43.972
ENSSDUG00000016450	-	51	42.056	ENSSDUG00000018060	snai2	57	42.056
ENSSDUG00000016450	-	72	34.815	ENSSDUG00000000695	-	84	30.018
ENSSDUG00000016450	-	66	44.379	ENSSDUG00000009425	-	58	44.379
ENSSDUG00000016450	-	74	42.857	ENSSDUG00000009421	-	85	42.857
ENSSDUG00000016450	-	72	39.394	ENSSDUG00000002195	-	95	40.426
ENSSDUG00000016450	-	58	32.203	ENSSDUG00000009223	zbtb41	53	31.844
ENSSDUG00000016450	-	50	35.238	ENSSDUG00000007752	scrt1b	62	35.238
ENSSDUG00000016450	-	73	37.755	ENSSDUG00000015159	-	86	42.353
ENSSDUG00000016450	-	73	44.156	ENSSDUG00000007336	-	99	36.741
ENSSDUG00000016450	-	67	38.667	ENSSDUG00000013048	-	67	38.667
ENSSDUG00000016450	-	58	47.436	ENSSDUG00000008682	-	76	47.436
ENSSDUG00000016450	-	66	30.458	ENSSDUG00000003003	znf319b	82	31.741
ENSSDUG00000016450	-	73	41.667	ENSSDUG00000004835	-	95	36.652
ENSSDUG00000016450	-	66	38.636	ENSSDUG00000011244	-	79	38.636
ENSSDUG00000016450	-	52	39.362	ENSSDUG00000020774	-	61	39.167
ENSSDUG00000016450	-	67	32.737	ENSSDUG00000000705	-	67	32.737
ENSSDUG00000016450	-	57	36.239	ENSSDUG00000019932	ZNF319	86	32.819
ENSSDUG00000016450	-	72	44.720	ENSSDUG00000015622	-	76	43.275
ENSSDUG00000016450	-	72	40.000	ENSSDUG00000009534	-	67	50.000
ENSSDUG00000016450	-	66	38.912	ENSSDUG00000020805	-	80	45.833
ENSSDUG00000016450	-	73	36.095	ENSSDUG00000014574	znf526	63	34.286
ENSSDUG00000016450	-	51	36.471	ENSSDUG00000000889	-	75	36.471
ENSSDUG00000016450	-	73	42.105	ENSSDUG00000019911	-	66	40.506
ENSSDUG00000016450	-	66	44.505	ENSSDUG00000005323	-	94	42.932
ENSSDUG00000016450	-	70	33.333	ENSSDUG00000002675	znf646	91	33.333
ENSSDUG00000016450	-	57	42.442	ENSSDUG00000006808	-	81	42.442
ENSSDUG00000016450	-	57	41.667	ENSSDUG00000004867	-	98	42.373
ENSSDUG00000016450	-	53	38.182	ENSSDUG00000022410	gfi1ab	52	38.994
ENSSDUG00000016450	-	70	38.800	ENSSDUG00000016734	-	72	38.800
ENSSDUG00000016450	-	62	36.522	ENSSDUG00000000871	-	95	36.522
ENSSDUG00000016450	-	50	33.929	ENSSDUG00000001637	scrt2	51	35.238
ENSSDUG00000016450	-	72	38.163	ENSSDUG00000009563	-	71	43.056
ENSSDUG00000016450	-	73	41.667	ENSSDUG00000020788	-	80	41.327
ENSSDUG00000016450	-	67	40.838	ENSSDUG00000020783	-	62	40.838
ENSSDUG00000016450	-	66	41.509	ENSSDUG00000022170	zbtb49	64	41.509
ENSSDUG00000016450	-	73	42.562	ENSSDUG00000008943	-	92	42.562
ENSSDUG00000016450	-	66	37.054	ENSSDUG00000000786	-	98	41.333
ENSSDUG00000016450	-	72	47.170	ENSSDUG00000009577	-	69	47.170
ENSSDUG00000016450	-	72	51.389	ENSSDUG00000009601	-	89	51.389
ENSSDUG00000016450	-	70	40.084	ENSSDUG00000020595	-	93	38.075
ENSSDUG00000016450	-	51	40.000	ENSSDUG00000011604	gfi1b	56	40.000
ENSSDUG00000016450	-	65	40.741	ENSSDUG00000000748	sall1b	61	42.857
ENSSDUG00000016450	-	73	42.188	ENSSDUG00000000946	-	98	42.188
ENSSDUG00000016450	-	66	31.395	ENSSDUG00000002174	-	80	33.555
ENSSDUG00000016450	-	50	36.190	ENSSDUG00000013215	-	62	36.190
ENSSDUG00000016450	-	78	35.443	ENSSDUG00000002488	-	72	33.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016450	-	100	76.311	ENSAOCG00000013656	-	99	76.311	Amphiprion_ocellaris
ENSSDUG00000016450	-	72	58.669	ENSHCOG00000000800	-	88	58.669	Hippocampus_comes
ENSSDUG00000016450	-	83	55.947	ENSKMAG00000007892	-	97	59.091	Kryptolebias_marmoratus
ENSSDUG00000016450	-	74	76.420	ENSLBEG00000005715	-	89	76.420	Labrus_bergylta
ENSSDUG00000016450	-	94	59.635	ENSOMEG00000021903	-	99	55.735	Oryzias_melastigma
ENSSDUG00000016450	-	63	50.781	ENSPMEG00000019463	-	88	56.164	Poecilia_mexicana
ENSSDUG00000016450	-	100	76.050	ENSSMAG00000021271	-	96	77.379	Scophthalmus_maximus
ENSSDUG00000016450	-	96	62.151	ENSSPAG00000023063	-	99	67.850	Stegastes_partitus
ENSSDUG00000016450	-	100	65.251	ENSTRUG00000022843	-	98	65.239	Takifugu_rubripes