EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016587 (Gene tree)
Gene ID: 111235271
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 14572 bases
Position: chrBDQW01000478.1:4179616-4194187
Accession: 111235271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022825	2OG-FeII_Oxy	PF03171.20	2.4e-08	1	1
ENSSDUP00000022801	2OG-FeII_Oxy	PF03171.20	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023242	-	3489	XM_022763672	ENSSDUP00000022825	548 (aa)	XP_022619393	UPI000BBECFE0
ENSSDUT00000023219	-	3744	XM_022763673	ENSSDUP00000022801	568 (aa)	XP_022619394	-

Gene Model

Click here to download ENSSDUG00000016587's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00330	Arginine and proline metabolism	KEGG
sdu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016587	p4ha1b	98	74.492	ENSG00000122884	P4HA1	97	75.189	Homo_sapiens
ENSSDUG00000016587	p4ha1b	99	91.026	ENSAPOG00000005170	p4ha1b	97	91.288	Acanthochromis_polyacanthus
ENSSDUG00000016587	p4ha1b	98	74.444	ENSAMEG00000017009	P4HA1	97	75.810	Ailuropoda_melanoleuca
ENSSDUG00000016587	p4ha1b	99	86.679	ENSACIG00000007255	p4ha1b	99	87.189	Amphilophus_citrinellus
ENSSDUG00000016587	p4ha1b	100	90.893	ENSAOCG00000001647	p4ha1b	100	90.893	Amphiprion_ocellaris
ENSSDUG00000016587	p4ha1b	100	90.893	ENSAPEG00000005243	p4ha1b	100	90.893	Amphiprion_percula
ENSSDUG00000016587	p4ha1b	95	65.709	ENSAPEG00000010402	-	96	65.589	Amphiprion_percula
ENSSDUG00000016587	p4ha1b	100	90.876	ENSATEG00000009272	p4ha1b	100	90.876	Anabas_testudineus
ENSSDUG00000016587	p4ha1b	96	75.475	ENSAPLG00000009284	P4HA1	100	74.624	Anas_platyrhynchos
ENSSDUG00000016587	p4ha1b	96	77.273	ENSACAG00000000564	P4HA1	96	76.996	Anolis_carolinensis
ENSSDUG00000016587	p4ha1b	98	74.815	ENSANAG00000024545	P4HA1	96	78.322	Aotus_nancymaae
ENSSDUG00000016587	p4ha1b	100	87.796	ENSACLG00000021556	p4ha1b	100	87.978	Astatotilapia_calliptera
ENSSDUG00000016587	p4ha1b	98	81.784	ENSAMXG00000011123	p4ha1b	97	82.857	Astyanax_mexicanus
ENSSDUG00000016587	p4ha1b	98	74.815	ENSBTAG00000032996	P4HA1	97	76.190	Bos_taurus
ENSSDUG00000016587	p4ha1b	98	74.815	ENSCJAG00000007429	P4HA1	96	78.322	Callithrix_jacchus
ENSSDUG00000016587	p4ha1b	98	74.768	ENSCAFG00000014573	P4HA1	97	76.000	Canis_familiaris
ENSSDUG00000016587	p4ha1b	96	75.000	ENSCAFG00020023993	P4HA1	97	74.708	Canis_lupus_dingo
ENSSDUG00000016587	p4ha1b	98	74.535	ENSCHIG00000013957	P4HA1	97	76.000	Capra_hircus
ENSSDUG00000016587	p4ha1b	98	74.492	ENSTSYG00000004004	P4HA1	100	77.049	Carlito_syrichta
ENSSDUG00000016587	p4ha1b	98	73.929	ENSCPOG00000015701	P4HA1	96	78.322	Cavia_porcellus
ENSSDUG00000016587	p4ha1b	98	74.492	ENSCATG00000029618	P4HA1	96	78.322	Cercocebus_atys
ENSSDUG00000016587	p4ha1b	98	73.937	ENSCLAG00000017260	P4HA1	96	79.021	Chinchilla_lanigera
ENSSDUG00000016587	p4ha1b	98	73.383	ENSCSAG00000008626	P4HA1	97	74.053	Chlorocebus_sabaeus
ENSSDUG00000016587	p4ha1b	99	76.199	ENSCPBG00000007933	P4HA1	96	77.333	Chrysemys_picta_bellii
ENSSDUG00000016587	p4ha1b	98	74.492	ENSCANG00000033147	P4HA1	96	78.322	Colobus_angolensis_palliatus
ENSSDUG00000016587	p4ha1b	98	74.074	ENSCGRG00001007006	P4ha1	96	77.622	Cricetulus_griseus_chok1gshd
ENSSDUG00000016587	p4ha1b	98	74.074	ENSCGRG00000009371	P4ha1	96	77.622	Cricetulus_griseus_crigri
ENSSDUG00000016587	p4ha1b	99	87.661	ENSCSEG00000004939	p4ha1b	97	88.571	Cynoglossus_semilaevis
ENSSDUG00000016587	p4ha1b	100	88.139	ENSCVAG00000016433	p4ha1b	100	88.139	Cyprinodon_variegatus
ENSSDUG00000016587	p4ha1b	95	38.123	ENSDARG00000017038	zgc:152670	93	51.282	Danio_rerio
ENSSDUG00000016587	p4ha1b	96	83.429	ENSDARG00000071082	p4ha1b	97	83.238	Danio_rerio
ENSSDUG00000016587	p4ha1b	97	72.626	ENSDNOG00000013665	P4HA1	91	73.614	Dasypus_novemcinctus
ENSSDUG00000016587	p4ha1b	98	74.723	ENSDORG00000003405	P4ha1	96	79.021	Dipodomys_ordii
ENSSDUG00000016587	p4ha1b	97	59.774	ENSEBUG00000005379	p4ha1b	95	61.197	Eptatretus_burgeri
ENSSDUG00000016587	p4ha1b	95	74.330	ENSEASG00005016606	P4HA1	96	78.322	Equus_asinus_asinus
ENSSDUG00000016587	p4ha1b	98	74.164	ENSECAG00000012496	P4HA1	100	73.055	Equus_caballus
ENSSDUG00000016587	p4ha1b	84	73.203	ENSEEUG00000005542	P4HA1	82	78.986	Erinaceus_europaeus
ENSSDUG00000016587	p4ha1b	98	81.181	ENSELUG00000005913	p4ha1b	99	80.116	Esox_lucius
ENSSDUG00000016587	p4ha1b	98	74.630	ENSFCAG00000018673	P4HA1	97	76.000	Felis_catus
ENSSDUG00000016587	p4ha1b	98	74.630	ENSFALG00000012773	P4HA1	96	75.048	Ficedula_albicollis
ENSSDUG00000016587	p4ha1b	98	67.347	ENSFDAG00000007094	P4HA1	97	68.571	Fukomys_damarensis
ENSSDUG00000016587	p4ha1b	100	89.312	ENSFHEG00000022856	p4ha1b	100	89.312	Fundulus_heteroclitus
ENSSDUG00000016587	p4ha1b	94	80.769	ENSGMOG00000018948	p4ha1b	100	80.769	Gadus_morhua
ENSSDUG00000016587	p4ha1b	98	75.696	ENSGALG00000004325	P4HA1	96	76.271	Gallus_gallus
ENSSDUG00000016587	p4ha1b	100	89.416	ENSGAFG00000019818	p4ha1b	100	89.416	Gambusia_affinis
ENSSDUG00000016587	p4ha1b	96	88.805	ENSGACG00000010233	p4ha1b	97	88.805	Gasterosteus_aculeatus
ENSSDUG00000016587	p4ha1b	98	74.492	ENSGGOG00000015551	P4HA1	96	78.322	Gorilla_gorilla
ENSSDUG00000016587	p4ha1b	100	87.796	ENSHBUG00000015524	p4ha1b	100	87.978	Haplochromis_burtoni
ENSSDUG00000016587	p4ha1b	98	74.074	ENSHGLG00000011764	P4HA1	96	78.322	Heterocephalus_glaber_female
ENSSDUG00000016587	p4ha1b	94	85.465	ENSHCOG00000017152	p4ha1b	100	85.465	Hippocampus_comes
ENSSDUG00000016587	p4ha1b	96	80.190	ENSIPUG00000015157	P4HA1	97	80.190	Ictalurus_punctatus
ENSSDUG00000016587	p4ha1b	98	74.397	ENSSTOG00000027062	P4HA1	96	77.622	Ictidomys_tridecemlineatus
ENSSDUG00000016587	p4ha1b	98	74.535	ENSJJAG00000004232	P4ha1	96	79.021	Jaculus_jaculus
ENSSDUG00000016587	p4ha1b	96	91.098	ENSKMAG00000001588	p4ha1b	97	91.667	Kryptolebias_marmoratus
ENSSDUG00000016587	p4ha1b	100	89.964	ENSLBEG00000018911	p4ha1b	100	89.964	Labrus_bergylta
ENSSDUG00000016587	p4ha1b	96	76.471	ENSLACG00000010202	P4HA1	97	76.471	Latimeria_chalumnae
ENSSDUG00000016587	p4ha1b	99	79.235	ENSLOCG00000008546	p4ha1b	95	80.381	Lepisosteus_oculatus
ENSSDUG00000016587	p4ha1b	98	74.492	ENSLAFG00000002652	P4HA1	97	75.522	Loxodonta_africana
ENSSDUG00000016587	p4ha1b	98	74.492	ENSMFAG00000030507	P4HA1	96	78.322	Macaca_fascicularis
ENSSDUG00000016587	p4ha1b	94	74.468	ENSMMUG00000011274	P4HA1	96	78.322	Macaca_mulatta
ENSSDUG00000016587	p4ha1b	98	71.747	ENSMNEG00000011433	P4HA1	95	75.148	Macaca_nemestrina
ENSSDUG00000016587	p4ha1b	94	70.600	ENSMLEG00000043338	P4HA1	100	79.508	Mandrillus_leucophaeus
ENSSDUG00000016587	p4ha1b	99	91.160	ENSMAMG00000015854	p4ha1b	98	90.667	Mastacembelus_armatus
ENSSDUG00000016587	p4ha1b	100	87.614	ENSMZEG00005027421	p4ha1b	100	87.796	Maylandia_zebra
ENSSDUG00000016587	p4ha1b	98	73.937	ENSMGAG00000005554	P4HA1	100	74.906	Meleagris_gallopavo
ENSSDUG00000016587	p4ha1b	98	60.185	ENSMAUG00000011056	P4ha1	93	66.774	Mesocricetus_auratus
ENSSDUG00000016587	p4ha1b	100	74.000	ENSMICG00000031365	P4HA1	96	78.322	Microcebus_murinus
ENSSDUG00000016587	p4ha1b	98	73.889	ENSMOCG00000017531	P4ha1	96	76.923	Microtus_ochrogaster
ENSSDUG00000016587	p4ha1b	96	88.571	ENSMMOG00000008022	p4ha1b	97	88.571	Mola_mola
ENSSDUG00000016587	p4ha1b	98	75.093	ENSMODG00000000121	P4HA1	96	76.000	Monodelphis_domestica
ENSSDUG00000016587	p4ha1b	100	92.518	ENSMALG00000019674	p4ha1b	100	92.518	Monopterus_albus
ENSSDUG00000016587	p4ha1b	98	73.937	MGP_CAROLIEiJ_G0015342	P4ha1	96	76.923	Mus_caroli
ENSSDUG00000016587	p4ha1b	98	73.752	ENSMUSG00000019916	P4ha1	96	76.923	Mus_musculus
ENSSDUG00000016587	p4ha1b	98	73.937	MGP_PahariEiJ_G0030758	P4ha1	96	77.622	Mus_pahari
ENSSDUG00000016587	p4ha1b	98	73.752	MGP_SPRETEiJ_G0016153	P4ha1	96	76.923	Mus_spretus
ENSSDUG00000016587	p4ha1b	98	73.655	ENSMPUG00000003940	P4HA1	97	74.667	Mustela_putorius_furo
ENSSDUG00000016587	p4ha1b	98	74.164	ENSMLUG00000006548	P4HA1	97	75.619	Myotis_lucifugus
ENSSDUG00000016587	p4ha1b	98	74.630	ENSNGAG00000014487	P4ha1	96	77.622	Nannospalax_galili
ENSSDUG00000016587	p4ha1b	96	86.907	ENSNBRG00000014791	p4ha1b	100	86.837	Neolamprologus_brichardi
ENSSDUG00000016587	p4ha1b	98	65.434	ENSNLEG00000035416	P4HA1	99	76.763	Nomascus_leucogenys
ENSSDUG00000016587	p4ha1b	90	66.870	ENSMEUG00000010326	P4HA1	95	68.089	Notamacropus_eugenii
ENSSDUG00000016587	p4ha1b	98	64.444	ENSOPRG00000000990	P4HA1	97	64.952	Ochotona_princeps
ENSSDUG00000016587	p4ha1b	85	73.418	ENSODEG00000015164	P4HA1	96	79.021	Octodon_degus
ENSSDUG00000016587	p4ha1b	100	88.566	ENSONIG00000000737	p4ha1b	90	88.566	Oreochromis_niloticus
ENSSDUG00000016587	p4ha1b	79	74.365	ENSOANG00000001125	-	100	74.134	Ornithorhynchus_anatinus
ENSSDUG00000016587	p4ha1b	98	74.444	ENSOCUG00000009739	P4HA1	97	74.763	Oryctolagus_cuniculus
ENSSDUG00000016587	p4ha1b	96	86.528	ENSORLG00000005147	p4ha1b	100	86.434	Oryzias_latipes
ENSSDUG00000016587	p4ha1b	96	86.528	ENSORLG00020010911	p4ha1b	96	86.528	Oryzias_latipes_hni
ENSSDUG00000016587	p4ha1b	88	85.391	ENSORLG00015016175	p4ha1b	98	83.740	Oryzias_latipes_hsok
ENSSDUG00000016587	p4ha1b	96	86.528	ENSOMEG00000009962	p4ha1b	97	86.932	Oryzias_melastigma
ENSSDUG00000016587	p4ha1b	98	74.401	ENSOGAG00000003483	P4HA1	97	75.332	Otolemur_garnettii
ENSSDUG00000016587	p4ha1b	98	73.420	ENSOARG00000007348	P4HA1	97	74.857	Ovis_aries
ENSSDUG00000016587	p4ha1b	98	68.934	ENSPPAG00000030135	P4HA1	100	79.508	Pan_paniscus
ENSSDUG00000016587	p4ha1b	98	74.630	ENSPPRG00000002655	P4HA1	97	76.000	Panthera_pardus
ENSSDUG00000016587	p4ha1b	98	74.630	ENSPTIG00000007711	P4HA1	97	76.000	Panthera_tigris_altaica
ENSSDUG00000016587	p4ha1b	98	68.946	ENSPTRG00000002619	P4HA1	96	78.322	Pan_troglodytes
ENSSDUG00000016587	p4ha1b	98	74.492	ENSPANG00000022355	P4HA1	96	78.322	Papio_anubis
ENSSDUG00000016587	p4ha1b	99	79.852	ENSPKIG00000000438	p4ha1b	96	80.076	Paramormyrops_kingsleyae
ENSSDUG00000016587	p4ha1b	99	76.384	ENSPSIG00000016298	P4HA1	96	76.952	Pelodiscus_sinensis
ENSSDUG00000016587	p4ha1b	98	81.701	ENSPMGG00000007593	p4ha1b	96	83.525	Periophthalmus_magnuspinnatus
ENSSDUG00000016587	p4ha1b	98	73.704	ENSPEMG00000006561	P4ha1	96	77.622	Peromyscus_maniculatus_bairdii
ENSSDUG00000016587	p4ha1b	98	75.651	ENSPCIG00000018768	P4HA1	97	76.571	Phascolarctos_cinereus
ENSSDUG00000016587	p4ha1b	100	89.781	ENSPFOG00000018574	p4ha1b	100	89.781	Poecilia_formosa
ENSSDUG00000016587	p4ha1b	100	90.146	ENSPLAG00000012628	p4ha1b	100	93.168	Poecilia_latipinna
ENSSDUG00000016587	p4ha1b	100	89.964	ENSPMEG00000024082	p4ha1b	100	89.964	Poecilia_mexicana
ENSSDUG00000016587	p4ha1b	100	90.511	ENSPREG00000010003	p4ha1b	100	90.511	Poecilia_reticulata
ENSSDUG00000016587	p4ha1b	98	73.383	ENSPPYG00000002348	P4HA1	97	74.053	Pongo_abelii
ENSSDUG00000016587	p4ha1b	94	67.636	ENSPCOG00000017553	P4HA1	100	79.918	Propithecus_coquereli
ENSSDUG00000016587	p4ha1b	98	66.543	ENSPVAG00000012989	P4HA1	97	67.048	Pteropus_vampyrus
ENSSDUG00000016587	p4ha1b	100	87.978	ENSPNYG00000002443	p4ha1b	100	88.160	Pundamilia_nyererei
ENSSDUG00000016587	p4ha1b	99	81.331	ENSPNAG00000023149	p4ha1b	97	83.238	Pygocentrus_nattereri
ENSSDUG00000016587	p4ha1b	98	73.148	ENSRNOG00000050655	P4ha1	97	73.485	Rattus_norvegicus
ENSSDUG00000016587	p4ha1b	98	65.434	ENSRBIG00000035304	P4HA1	97	66.160	Rhinopithecus_bieti
ENSSDUG00000016587	p4ha1b	98	74.630	ENSRROG00000044078	P4HA1	96	78.322	Rhinopithecus_roxellana
ENSSDUG00000016587	p4ha1b	71	71.100	ENSSHAG00000008056	P4HA1	100	71.026	Sarcophilus_harrisii
ENSSDUG00000016587	p4ha1b	98	77.922	ENSSFOG00015009176	p4ha1b	100	77.237	Scleropages_formosus
ENSSDUG00000016587	p4ha1b	99	91.713	ENSSMAG00000019199	p4ha1b	97	92.190	Scophthalmus_maximus
ENSSDUG00000016587	p4ha1b	100	99.453	ENSSLDG00000016261	p4ha1b	100	99.453	Seriola_lalandi_dorsalis
ENSSDUG00000016587	p4ha1b	98	71.429	ENSSARG00000003275	P4HA1	97	72.381	Sorex_araneus
ENSSDUG00000016587	p4ha1b	98	75.601	ENSSPUG00000002624	P4HA1	96	75.425	Sphenodon_punctatus
ENSSDUG00000016587	p4ha1b	84	88.486	ENSSPAG00000011193	p4ha1b	100	88.486	Stegastes_partitus
ENSSDUG00000016587	p4ha1b	98	74.583	ENSSSCG00000010292	P4HA1	97	75.619	Sus_scrofa
ENSSDUG00000016587	p4ha1b	98	74.630	ENSTGUG00000004364	-	97	75.048	Taeniopygia_guttata
ENSSDUG00000016587	p4ha1b	98	88.603	ENSTRUG00000004081	p4ha1b	97	89.057	Takifugu_rubripes
ENSSDUG00000016587	p4ha1b	99	85.110	ENSTNIG00000017021	p4ha1b	97	86.667	Tetraodon_nigroviridis
ENSSDUG00000016587	p4ha1b	98	73.148	ENSTTRG00000009782	P4HA1	96	74.088	Tursiops_truncatus
ENSSDUG00000016587	p4ha1b	98	74.768	ENSUMAG00000009024	P4HA1	97	75.810	Ursus_maritimus
ENSSDUG00000016587	p4ha1b	98	66.048	ENSVPAG00000007253	P4HA1	97	66.286	Vicugna_pacos
ENSSDUG00000016587	p4ha1b	98	73.655	ENSVVUG00000022660	P4HA1	97	74.857	Vulpes_vulpes
ENSSDUG00000016587	p4ha1b	100	69.928	ENSXETG00000006154	p4ha1	96	71.645	Xenopus_tropicalis
ENSSDUG00000016587	p4ha1b	99	87.091	ENSXCOG00000010262	p4ha1b	99	87.091	Xiphophorus_couchianus
ENSSDUG00000016587	p4ha1b	100	89.051	ENSXMAG00000003889	p4ha1b	100	89.051	Xiphophorus_maculatus