EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016612 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5551 bases
Position: chrBDQW01002177.1:178738-184288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022840	MMR_HSR1	PF01926.23	9.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023257	-	627	-	ENSSDUP00000022840	208 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016612	-	80	86.826	ENSSDUG00000009231	-	67	86.826
ENSSDUG00000016612	-	79	40.116	ENSSDUG00000016927	-	62	40.116
ENSSDUG00000016612	-	77	59.006	ENSSDUG00000016459	-	62	59.006
ENSSDUG00000016612	-	76	40.252	ENSSDUG00000001369	-	57	40.252
ENSSDUG00000016612	-	92	33.166	ENSSDUG00000023539	-	84	33.166
ENSSDUG00000016612	-	79	60.606	ENSSDUG00000016791	-	59	60.606
ENSSDUG00000016612	-	80	84.337	ENSSDUG00000004973	-	73	84.337
ENSSDUG00000016612	-	76	40.252	ENSSDUG00000001415	-	57	40.252
ENSSDUG00000016612	-	82	41.765	ENSSDUG00000002104	-	52	41.765
ENSSDUG00000016612	-	85	36.932	ENSSDUG00000001383	-	55	36.932
ENSSDUG00000016612	-	79	50.303	ENSSDUG00000020772	-	56	50.303
ENSSDUG00000016612	-	76	45.570	ENSSDUG00000018996	-	73	45.570
ENSSDUG00000016612	-	77	38.750	ENSSDUG00000009222	-	54	38.750
ENSSDUG00000016612	-	76	47.170	ENSSDUG00000023540	-	67	47.170
ENSSDUG00000016612	-	78	37.209	ENSSDUG00000022299	-	61	37.209
ENSSDUG00000016612	-	77	43.827	ENSSDUG00000003676	-	51	43.827
ENSSDUG00000016612	-	77	40.373	ENSSDUG00000023838	-	57	40.373
ENSSDUG00000016612	-	79	43.902	ENSSDUG00000023839	-	56	43.902
ENSSDUG00000016612	-	78	53.086	ENSSDUG00000023286	-	54	53.086
ENSSDUG00000016612	-	83	38.068	ENSSDUG00000018096	si:dkey-110g7.8	61	38.068
ENSSDUG00000016612	-	76	39.873	ENSSDUG00000016607	-	56	39.873
ENSSDUG00000016612	-	77	81.988	ENSSDUG00000016605	-	56	81.988
ENSSDUG00000016612	-	80	86.145	ENSSDUG00000013443	-	60	86.145
ENSSDUG00000016612	-	78	46.296	ENSSDUG00000020760	-	53	46.296
ENSSDUG00000016612	-	76	47.799	ENSSDUG00000004552	-	68	47.799
ENSSDUG00000016612	-	74	46.795	ENSSDUG00000003691	-	65	46.795
ENSSDUG00000016612	-	78	48.810	ENSSDUG00000003711	-	57	48.810
ENSSDUG00000016612	-	91	50.000	ENSSDUG00000020733	-	75	50.000
ENSSDUG00000016612	-	78	35.802	ENSSDUG00000019892	-	63	46.970
ENSSDUG00000016612	-	84	57.459	ENSSDUG00000023613	-	54	57.459
ENSSDUG00000016612	-	79	58.537	ENSSDUG00000021006	-	70	58.537
ENSSDUG00000016612	-	77	52.795	ENSSDUG00000021707	-	56	52.795
ENSSDUG00000016612	-	77	60.248	ENSSDUG00000016775	-	53	60.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016612	-	80	55.689	ENSAPOG00000001447	-	55	55.689	Acanthochromis_polyacanthus
ENSSDUG00000016612	-	80	62.874	ENSACIG00000012718	-	70	62.874	Amphilophus_citrinellus
ENSSDUG00000016612	-	77	74.534	ENSACIG00000012648	-	54	74.534	Amphilophus_citrinellus
ENSSDUG00000016612	-	80	58.333	ENSAOCG00000002389	-	51	58.333	Amphiprion_ocellaris
ENSSDUG00000016612	-	82	74.691	ENSAOCG00000022545	-	52	74.691	Amphiprion_ocellaris
ENSSDUG00000016612	-	82	73.620	ENSAOCG00000013686	-	77	73.620	Amphiprion_ocellaris
ENSSDUG00000016612	-	84	54.545	ENSAPEG00000021634	-	58	54.545	Amphiprion_percula
ENSSDUG00000016612	-	83	74.566	ENSACLG00000005066	-	62	74.566	Astatotilapia_calliptera
ENSSDUG00000016612	-	78	74.390	ENSACLG00000005669	-	58	74.390	Astatotilapia_calliptera
ENSSDUG00000016612	-	80	62.874	ENSACLG00000024854	-	55	62.874	Astatotilapia_calliptera
ENSSDUG00000016612	-	83	55.932	ENSACLG00000024836	-	64	55.932	Astatotilapia_calliptera
ENSSDUG00000016612	-	80	63.473	ENSACLG00000009780	-	51	63.473	Astatotilapia_calliptera
ENSSDUG00000016612	-	69	60.417	ENSAMXG00000036745	-	53	60.417	Astyanax_mexicanus
ENSSDUG00000016612	-	75	53.165	ENSAMXG00000039685	-	66	53.165	Astyanax_mexicanus
ENSSDUG00000016612	-	89	53.476	ENSAMXG00000030826	-	91	53.476	Astyanax_mexicanus
ENSSDUG00000016612	-	99	57.988	ENSAMXG00000030783	-	63	57.988	Astyanax_mexicanus
ENSSDUG00000016612	-	79	61.212	ENSAMXG00000037741	-	67	61.212	Astyanax_mexicanus
ENSSDUG00000016612	-	78	56.098	ENSAMXG00000024930	-	54	56.098	Astyanax_mexicanus
ENSSDUG00000016612	-	70	67.347	ENSCVAG00000023293	-	68	67.347	Cyprinodon_variegatus
ENSSDUG00000016612	-	87	60.000	ENSDARG00000086048	si:ch211-229i14.2	57	60.000	Danio_rerio
ENSSDUG00000016612	-	85	55.429	ENSELUG00000005405	-	52	57.143	Esox_lucius
ENSSDUG00000016612	-	82	54.706	ENSFHEG00000021828	-	72	54.706	Fundulus_heteroclitus
ENSSDUG00000016612	-	77	40.361	ENSFHEG00000007909	-	60	40.361	Fundulus_heteroclitus
ENSSDUG00000016612	-	80	34.524	ENSGMOG00000006359	-	74	34.524	Gadus_morhua
ENSSDUG00000016612	-	79	64.024	ENSGACG00000002627	-	64	64.024	Gasterosteus_aculeatus
ENSSDUG00000016612	-	78	77.914	ENSHBUG00000006928	-	51	77.914	Haplochromis_burtoni
ENSSDUG00000016612	-	79	76.970	ENSHBUG00000011156	-	52	76.970	Haplochromis_burtoni
ENSSDUG00000016612	-	83	61.143	ENSHBUG00000002999	-	62	61.143	Haplochromis_burtoni
ENSSDUG00000016612	-	81	65.089	ENSHBUG00000000157	-	62	65.089	Haplochromis_burtoni
ENSSDUG00000016612	-	81	73.864	ENSHBUG00000020672	-	82	73.864	Haplochromis_burtoni
ENSSDUG00000016612	-	82	59.302	ENSHBUG00000003010	-	55	59.302	Haplochromis_burtoni
ENSSDUG00000016612	-	81	72.121	ENSKMAG00000010851	-	52	72.121	Kryptolebias_marmoratus
ENSSDUG00000016612	-	80	72.892	ENSLBEG00000022878	-	52	72.892	Labrus_bergylta
ENSSDUG00000016612	-	81	73.054	ENSLBEG00000028623	-	68	73.054	Labrus_bergylta
ENSSDUG00000016612	-	80	62.500	ENSLBEG00000006614	-	66	62.500	Labrus_bergylta
ENSSDUG00000016612	-	81	74.251	ENSLBEG00000012647	-	53	74.699	Labrus_bergylta
ENSSDUG00000016612	-	80	38.012	ENSLBEG00000003708	-	59	38.012	Labrus_bergylta
ENSSDUG00000016612	-	81	78.151	ENSLBEG00000017021	-	72	78.151	Labrus_bergylta
ENSSDUG00000016612	-	81	74.850	ENSLBEG00000010625	-	64	74.850	Labrus_bergylta
ENSSDUG00000016612	-	86	56.180	ENSMAMG00000017892	-	61	56.180	Mastacembelus_armatus
ENSSDUG00000016612	-	64	43.262	ENSMAMG00000017590	-	77	43.262	Mastacembelus_armatus
ENSSDUG00000016612	-	81	57.927	ENSMAMG00000018061	-	57	57.927	Mastacembelus_armatus
ENSSDUG00000016612	-	81	60.355	ENSMAMG00000017874	-	66	60.355	Mastacembelus_armatus
ENSSDUG00000016612	-	90	55.263	ENSMZEG00005021732	-	56	55.263	Maylandia_zebra
ENSSDUG00000016612	-	79	70.909	ENSMZEG00005002051	-	58	70.909	Maylandia_zebra
ENSSDUG00000016612	-	80	62.874	ENSMZEG00005021723	-	52	62.874	Maylandia_zebra
ENSSDUG00000016612	-	81	55.882	ENSMZEG00005021721	-	61	55.882	Maylandia_zebra
ENSSDUG00000016612	-	78	77.301	ENSMZEG00005027848	-	77	77.301	Maylandia_zebra
ENSSDUG00000016612	-	82	76.163	ENSMZEG00005014235	-	59	76.163	Maylandia_zebra
ENSSDUG00000016612	-	76	33.735	ENSMMOG00000021314	-	68	33.735	Mola_mola
ENSSDUG00000016612	-	81	54.167	ENSMMOG00000010425	-	65	54.167	Mola_mola
ENSSDUG00000016612	-	84	53.012	ENSMALG00000004282	-	57	53.012	Monopterus_albus
ENSSDUG00000016612	-	78	58.282	ENSNBRG00000019143	-	59	58.282	Neolamprologus_brichardi
ENSSDUG00000016612	-	81	61.538	ENSNBRG00000014905	-	53	61.310	Neolamprologus_brichardi
ENSSDUG00000016612	-	81	72.189	ENSNBRG00000003060	-	54	72.189	Neolamprologus_brichardi
ENSSDUG00000016612	-	88	60.773	ENSONIG00000010736	-	50	60.795	Oreochromis_niloticus
ENSSDUG00000016612	-	80	78.443	ENSONIG00000012315	-	63	78.443	Oreochromis_niloticus
ENSSDUG00000016612	-	80	76.647	ENSONIG00000011313	-	54	76.647	Oreochromis_niloticus
ENSSDUG00000016612	-	76	34.706	ENSONIG00000012341	-	62	34.706	Oreochromis_niloticus
ENSSDUG00000016612	-	83	73.410	ENSONIG00000000314	-	68	73.410	Oreochromis_niloticus
ENSSDUG00000016612	-	82	61.988	ENSONIG00000004482	-	63	62.722	Oreochromis_niloticus
ENSSDUG00000016612	-	81	69.822	ENSONIG00000014210	-	71	69.822	Oreochromis_niloticus
ENSSDUG00000016612	-	81	77.108	ENSONIG00000013863	-	54	77.108	Oreochromis_niloticus
ENSSDUG00000016612	-	81	75.148	ENSONIG00000000233	-	53	75.148	Oreochromis_niloticus
ENSSDUG00000016612	-	78	59.877	ENSONIG00000013819	-	65	59.877	Oreochromis_niloticus
ENSSDUG00000016612	-	81	65.476	ENSORLG00000030459	-	51	65.476	Oryzias_latipes
ENSSDUG00000016612	-	83	64.162	ENSORLG00020014225	-	51	64.162	Oryzias_latipes_hni
ENSSDUG00000016612	-	89	71.084	ENSORLG00015004505	-	51	71.084	Oryzias_latipes_hsok
ENSSDUG00000016612	-	80	63.743	ENSOMEG00000009393	-	53	63.743	Oryzias_melastigma
ENSSDUG00000016612	-	80	57.485	ENSPMGG00000002488	-	57	57.927	Periophthalmus_magnuspinnatus
ENSSDUG00000016612	-	83	67.273	ENSPFOG00000000259	-	76	67.273	Poecilia_formosa
ENSSDUG00000016612	-	82	65.698	ENSPFOG00000024835	-	53	65.698	Poecilia_formosa
ENSSDUG00000016612	-	80	74.699	ENSPFOG00000001388	-	50	74.699	Poecilia_formosa
ENSSDUG00000016612	-	82	62.209	ENSPFOG00000000217	-	75	62.209	Poecilia_formosa
ENSSDUG00000016612	-	80	60.843	ENSPLAG00000000052	-	72	60.843	Poecilia_latipinna
ENSSDUG00000016612	-	57	66.949	ENSPLAG00000000053	-	69	66.949	Poecilia_latipinna
ENSSDUG00000016612	-	84	70.349	ENSPMEG00000009705	-	70	70.349	Poecilia_mexicana
ENSSDUG00000016612	-	82	74.096	ENSPMEG00000003917	-	53	74.096	Poecilia_mexicana
ENSSDUG00000016612	-	80	63.253	ENSPREG00000018694	-	56	63.253	Poecilia_reticulata
ENSSDUG00000016612	-	80	65.269	ENSPREG00000017000	-	51	65.269	Poecilia_reticulata
ENSSDUG00000016612	-	82	74.096	ENSPREG00000017114	-	53	74.096	Poecilia_reticulata
ENSSDUG00000016612	-	81	69.231	ENSPNYG00000003568	-	52	69.231	Pundamilia_nyererei
ENSSDUG00000016612	-	80	76.970	ENSPNYG00000004195	-	54	76.970	Pundamilia_nyererei
ENSSDUG00000016612	-	83	56.571	ENSPNYG00000008579	-	53	56.571	Pundamilia_nyererei
ENSSDUG00000016612	-	83	63.006	ENSPNYG00000019890	-	62	63.006	Pundamilia_nyererei
ENSSDUG00000016612	-	80	70.659	ENSPNYG00000023994	-	61	70.659	Pundamilia_nyererei
ENSSDUG00000016612	-	78	60.366	ENSPNAG00000003225	-	50	60.366	Pygocentrus_nattereri
ENSSDUG00000016612	-	83	80.556	ENSSMAG00000016994	-	71	80.556	Scophthalmus_maximus
ENSSDUG00000016612	-	80	62.048	ENSSLDG00000002744	-	77	62.048	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	81	65.089	ENSSLDG00000004233	-	58	64.024	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	80	85.629	ENSSLDG00000011692	-	79	85.629	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	87	60.335	ENSSLDG00000002339	-	66	60.335	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	80	83.234	ENSSLDG00000007022	-	55	83.234	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	85	59.444	ENSSLDG00000004473	-	70	59.444	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	78	60.366	ENSSLDG00000001533	-	58	60.366	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	79	61.818	ENSSLDG00000001606	-	57	61.818	Seriola_lalandi_dorsalis
ENSSDUG00000016612	-	78	58.282	ENSSPAG00000001365	-	60	58.282	Stegastes_partitus
ENSSDUG00000016612	-	83	80.000	ENSSPAG00000005977	-	51	80.000	Stegastes_partitus
ENSSDUG00000016612	-	78	61.728	ENSXCOG00000018711	-	55	61.728	Xiphophorus_couchianus
ENSSDUG00000016612	-	81	65.680	ENSXMAG00000027923	-	51	65.680	Xiphophorus_maculatus